RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 POMGNT1Q8WZA1 660 aa29.34■■■□□ 2.29
SSU72-201ENST00000291386 LMAN2LQ9H0V9 348 aa29.34■■■□□ 2.29
SSU72-201ENST00000291386 LMBRD1Q9NUN5 540 aa29.34■■■□□ 2.29
SSU72-201ENST00000291386 CNTN3Q9P232 1028 aa29.34■■■□□ 2.29
SSU72-201ENST00000291386 DNAJB4Q9UDY4 337 aa29.34■■■□□ 2.29
SSU72-201ENST00000291386 PDCD11Q14690 1871 aaKnown RBP29.34■■■□□ 2.29
SSU72-201ENST00000291386 PLXNA4Q9HCM2 1894 aa29.34■■■□□ 2.29
SSU72-201ENST00000291386 KIAA0391O15091 583 aaKnown RBP29.33■■■□□ 2.29
SSU72-201ENST00000291386 SMC2O95347 1197 aa29.33■■■□□ 2.29
SSU72-201ENST00000291386 KCNE1P15382 129 aa29.33■■■□□ 2.29
SSU72-201ENST00000291386 UBE3AQ05086 875 aa29.33■■■□□ 2.29
SSU72-201ENST00000291386 SEZ6Q53EL9 994 aa29.33■■■□□ 2.29
SSU72-201ENST00000291386 SPPL3Q8TCT6 385 aa29.33■■■□□ 2.29
SSU72-201ENST00000291386 PPP1R10Q96QC0 940 aaKnown RBP29.33■■■□□ 2.29
SSU72-201ENST00000291386 RMND1Q9NWS8 449 aa29.33■■■□□ 2.29
SSU72-201ENST00000291386 SPG21Q9NZD8 308 aa29.33■■■□□ 2.29
SSU72-201ENST00000291386 CGNQ9P2M7 1197 aaKnown RBP29.33■■■□□ 2.29
SSU72-201ENST00000291386 SMIM28A0A1B0GU29 152 aa29.32■■■□□ 2.28
SSU72-201ENST00000291386 TGFB1I1O43294 461 aa29.32■■■□□ 2.28
SSU72-201ENST00000291386 FGF18O76093 207 aa29.32■■■□□ 2.28
SSU72-201ENST00000291386 ALDH2P05091 517 aa29.32■■■□□ 2.28
SSU72-201ENST00000291386 TNFSF9P41273 254 aa29.32■■■□□ 2.28
SSU72-201ENST00000291386 SLC11A1P49279 550 aa29.32■■■□□ 2.28
SSU72-201ENST00000291386 TUSC3Q13454 348 aa29.32■■■□□ 2.28
SSU72-201ENST00000291386 KNOP1Q1ED39 458 aaKnown RBP29.32■■■□□ 2.28
SSU72-201ENST00000291386 TSPAN18Q96SJ8 248 aa29.32■■■□□ 2.28
SSU72-201ENST00000291386 LZTS1Q9Y250 596 aa29.32■■■□□ 2.28
SSU72-201ENST00000291386 PCDHA5Q9Y5H7 936 aa29.32■■■□□ 2.28
SSU72-201ENST00000291386 CDH23Q9H251 3354 aa29.32■■■□□ 2.28
SSU72-201ENST00000291386 TRANK1O15050 2925 aa29.31■■■□□ 2.28
SSU72-201ENST00000291386 TTC26A0AVF1 554 aa29.31■■■□□ 2.28
SSU72-201ENST00000291386 LDHAP00338 332 aaKnown RBP29.31■■■□□ 2.28
SSU72-201ENST00000291386 PBX3P40426 434 aa29.31■■■□□ 2.28
SSU72-201ENST00000291386 ZBTB41Q5SVQ8 909 aa29.31■■■□□ 2.28
SSU72-201ENST00000291386 CD302Q8IX05 232 aa29.31■■■□□ 2.28
SSU72-201ENST00000291386 RPF1Q9H9Y2 349 aaKnown RBP29.31■■■□□ 2.28
SSU72-201ENST00000291386 MTCH2Q9Y6C9 303 aa29.31■■■□□ 2.28
SSU72-201ENST00000291386 NRP1O14786 923 aa29.3■■■□□ 2.28
SSU72-201ENST00000291386 GRM6O15303 877 aa29.3■■■□□ 2.28
SSU72-201ENST00000291386 KIF20AO95235 890 aa29.3■■■□□ 2.28
SSU72-201ENST00000291386 CXCL8P10145 99 aa29.3■■■□□ 2.28
SSU72-201ENST00000291386 FOSL2P15408 326 aa29.3■■■□□ 2.28
SSU72-201ENST00000291386 ENOX2Q16206 610 aaKnown RBP29.3■■■□□ 2.28
SSU72-201ENST00000291386 PTPROQ16827 1216 aa29.3■■■□□ 2.28
SSU72-201ENST00000291386 ARMCX5Q6P1M9 558 aa29.3■■■□□ 2.28
SSU72-201ENST00000291386 CRELD2Q6UXH1 353 aaPredicted RBP29.3■■■□□ 2.28
SSU72-201ENST00000291386 NELFCDQ8IXH7 590 aa29.3■■■□□ 2.28
SSU72-201ENST00000291386 SMARCE1Q969G3 411 aa29.3■■■□□ 2.28
SSU72-201ENST00000291386 IGSF21Q96ID5 467 aa29.3■■■□□ 2.28
SSU72-201ENST00000291386 CBWD1Q9BRT8 395 aa29.3■■■□□ 2.28
SSU72-201ENST00000291386 GTPBP4Q9BZE4 634 aaKnown RBP29.3■■■□□ 2.28
SSU72-201ENST00000291386 ALG13Q9NP73 1137 aaKnown RBP29.3■■■□□ 2.28
SSU72-201ENST00000291386 SLC38A7Q9NVC3 462 aa29.3■■■□□ 2.28
SSU72-201ENST00000291386 STXBP5LQ9Y2K9 1186 aa29.3■■■□□ 2.28
SSU72-201ENST00000291386 FAN1Q9Y2M0 1017 aa29.3■■■□□ 2.28
SSU72-201ENST00000291386 GOLGA6L22H0YM25 854 aa29.29■■■□□ 2.28
SSU72-201ENST00000291386 C12orf56Q8IXR9 622 aa29.29■■■□□ 2.28
SSU72-201ENST00000291386 TMEM174Q8WUU8 243 aa29.29■■■□□ 2.28
SSU72-201ENST00000291386 MRPL38Q96DV4 380 aaKnown RBP29.29■■■□□ 2.28
SSU72-201ENST00000291386 ZMAT2Q96NC0 199 aaKnown RBP29.29■■■□□ 2.28
SSU72-201ENST00000291386 AGPAT3Q9NRZ7 376 aa29.29■■■□□ 2.28
SSU72-201ENST00000291386 ANK1P16157 1881 aa29.28■■■□□ 2.28
SSU72-201ENST00000291386 NT5C1B-RDH14C9J2C7 533 aa29.28■■■□□ 2.28
SSU72-201ENST00000291386 ACOT2P49753 483 aa29.28■■■□□ 2.28
SSU72-201ENST00000291386 KRT17Q04695 432 aa29.28■■■□□ 2.28
SSU72-201ENST00000291386 PPP2R3AQ06190 1150 aa29.28■■■□□ 2.28
SSU72-201ENST00000291386 CAMK1Q14012 370 aa29.28■■■□□ 2.28
SSU72-201ENST00000291386 GLRA4Q5JXX5 417 aa29.28■■■□□ 2.28
SSU72-201ENST00000291386 HS2ST1Q7LGA3 356 aa29.28■■■□□ 2.28
SSU72-201ENST00000291386 GUF1Q8N442 669 aaKnown RBP29.28■■■□□ 2.28
SSU72-201ENST00000291386 GOLGA5Q8TBA6 731 aa29.28■■■□□ 2.28
SSU72-201ENST00000291386 POF1BQ8WVV4 589 aa29.28■■■□□ 2.28
SSU72-201ENST00000291386 KCTD10Q9H3F6 313 aa29.28■■■□□ 2.28
SSU72-201ENST00000291386 GTF3C5Q9Y5Q8 519 aaPredicted RBP29.28■■■□□ 2.28
SSU72-201ENST00000291386 EXTL3O43909 919 aa29.27■■■□□ 2.28
SSU72-201ENST00000291386 OR1G1P47890 313 aa29.27■■■□□ 2.28
SSU72-201ENST00000291386 COBLL1Q53SF7 1204 aa29.27■■■□□ 2.28
SSU72-201ENST00000291386 ZNF658Q5TYW1 1059 aaPredicted RBP29.27■■■□□ 2.28
SSU72-201ENST00000291386 TMEM173Q86WV6 379 aaPredicted RBP29.27■■■□□ 2.28
SSU72-201ENST00000291386 ERCC4Q92889 916 aaPredicted RBP29.27■■■□□ 2.28
SSU72-201ENST00000291386 TMEM169Q96HH4 297 aa29.27■■■□□ 2.28
SSU72-201ENST00000291386 ASB7Q9H672 318 aa29.27■■■□□ 2.28
SSU72-201ENST00000291386 STK39Q9UEW8 545 aa29.27■■■□□ 2.28
SSU72-201ENST00000291386 PUF60Q9UHX1 559 aaKnown RBP29.27■■■□□ 2.28
SSU72-201ENST00000291386 ATG2AQ2TAZ0 1938 aa29.27■■■□□ 2.28
SSU72-201ENST00000291386 LACTBL1A8MY62 500 aa29.26■■■□□ 2.27
SSU72-201ENST00000291386 PDXKO00764 312 aa29.26■■■□□ 2.27
SSU72-201ENST00000291386 IGFBP4P22692 258 aa29.26■■■□□ 2.27
SSU72-201ENST00000291386 DNAJB1P25685 340 aa29.26■■■□□ 2.27
SSU72-201ENST00000291386 GPD1LQ8N335 351 aa29.26■■■□□ 2.27
SSU72-201ENST00000291386 UROC1Q96N76 676 aa29.26■■■□□ 2.27
SSU72-201ENST00000291386 COLEC11Q9BWP8 271 aa29.26■■■□□ 2.27
SSU72-201ENST00000291386 PCIF1Q9H4Z3 704 aa29.26■■■□□ 2.27
SSU72-201ENST00000291386 MARCH5Q9NX47 278 aa29.26■■■□□ 2.27
SSU72-201ENST00000291386 HSPBP1Q9NZL4 362 aa29.26■■■□□ 2.27
SSU72-201ENST00000291386 EFEMP2O95967 443 aa29.25■■■□□ 2.27
SSU72-201ENST00000291386 ZBTB6Q15916 424 aa29.25■■■□□ 2.27
SSU72-201ENST00000291386 DDX53Q86TM3 631 aaKnown RBP29.25■■■□□ 2.27
SSU72-201ENST00000291386 BRSK2Q8IWQ3 736 aa29.25■■■□□ 2.27
SSU72-201ENST00000291386 BCL7CQ8WUZ0 217 aaPredicted RBP29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms