RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 TCP11X1B4DZS4 312 aa5.09□□□□□ -1.6
UBR1-201ENST00000290650 PDE2AO00408 941 aaPredicted RBP5.09□□□□□ -1.6
UBR1-201ENST00000290650 HLA-DRAP01903 254 aa5.09□□□□□ -1.6
UBR1-201ENST00000290650 VCAM1P19320 739 aa5.09□□□□□ -1.6
UBR1-201ENST00000290650 NOP14P78316 857 aaKnown RBP5.09□□□□□ -1.6
UBR1-201ENST00000290650 CUL1Q13616 776 aa5.09□□□□□ -1.6
UBR1-201ENST00000290650 SLC15A2Q16348 729 aa5.09□□□□□ -1.6
UBR1-201ENST00000290650 IZUMO3Q5VZ72 239 aa5.09□□□□□ -1.6
UBR1-201ENST00000290650 ARHGEF18Q6ZSZ5 1173 aa5.09□□□□□ -1.6
UBR1-201ENST00000290650 ARMC9Q7Z3E5 817 aa5.09□□□□□ -1.6
UBR1-201ENST00000290650 ARHGEF19Q8IW93 802 aa5.09□□□□□ -1.6
UBR1-201ENST00000290650 ANKS1AQ92625 1134 aa5.09□□□□□ -1.6
UBR1-201ENST00000290650 RSRC1Q96IZ7 334 aaKnown RBP5.09□□□□□ -1.6
UBR1-201ENST00000290650 DNAJC7Q99615 494 aa5.09□□□□□ -1.6
UBR1-201ENST00000290650 PDGFDQ9GZP0 370 aaPredicted RBP5.09□□□□□ -1.6
UBR1-201ENST00000290650 LRRC4Q9HBW1 653 aa5.09□□□□□ -1.6
UBR1-201ENST00000290650 ODF2LQ9ULJ1 636 aa5.09□□□□□ -1.6
UBR1-201ENST00000290650 SSX2IPQ9Y2D8 614 aa5.09□□□□□ -1.6
UBR1-201ENST00000290650 MRC1P22897 1456 aa5.09□□□□□ -1.6
UBR1-201ENST00000290650 RGPD1P0DJD0 1748 aa5.09□□□□□ -1.6
UBR1-201ENST00000290650 NUP98P52948 1817 aa5.09□□□□□ -1.6
UBR1-201ENST00000290650 TROVE2P10155 538 aaKnown RBP eCLIP5.09□□□□□ -1.6
UBR1-201ENST00000290650 NCF2P19878 526 aaPredicted RBP5.09□□□□□ -1.6
UBR1-201ENST00000290650 CLCN3P51790 818 aa5.09□□□□□ -1.6
UBR1-201ENST00000290650 CNTN2Q02246 1040 aa5.09□□□□□ -1.6
UBR1-201ENST00000290650 EPM2AIP1Q7L775 607 aaPredicted RBP5.09□□□□□ -1.6
UBR1-201ENST00000290650 MCPH1Q8NEM0 835 aa5.09□□□□□ -1.6
UBR1-201ENST00000290650 DHX35Q9H5Z1 703 aaKnown RBP5.09□□□□□ -1.6
UBR1-201ENST00000290650 MARCOQ9UEW3 520 aaPredicted RBP5.09□□□□□ -1.6
UBR1-201ENST00000290650 PPP1R9AQ9ULJ8 1098 aa5.09□□□□□ -1.6
UBR1-201ENST00000290650 ROBO1Q9Y6N7 1651 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 GRID2IPA4D2P6 1211 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 SPDYE16A6NNV3 312 aaPredicted RBP5.08□□□□□ -1.6
UBR1-201ENST00000290650 RTN2O75298 545 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 PPFIA2O75334 1257 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 MOCS2O96007 188 aaPredicted RBP5.08□□□□□ -1.6
UBR1-201ENST00000290650 PRKCBP05771 671 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 ZNF286BP0CG31 522 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 CDH6P55285 790 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 ACTR2P61160 394 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 CXCL9Q07325 125 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 TBX2Q13207 712 aaPredicted RBP5.08□□□□□ -1.6
UBR1-201ENST00000290650 SPDYE2Q495Y8 402 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 PAN2Q504Q3 1202 aaKnown RBP5.08□□□□□ -1.6
UBR1-201ENST00000290650 NLRP14Q86W24 1093 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 RNF135Q8IUD6 432 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 SCN4BQ8IWT1 228 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 PPM1NQ8N819 430 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 ZSWIM2Q8NEG5 633 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 EPS8L3Q8TE67 593 aaKnown RBP5.08□□□□□ -1.6
UBR1-201ENST00000290650 ERGIC2Q96RQ1 377 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 FBXO40Q9UH90 709 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 L1RE1Q9UN81 338 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 AGAP1Q9UPQ3 857 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 H0YCG3 227 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 SUN1O94901 812 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 MT-ND3P03897 115 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 SRGAP2BP0DMP2 458 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 CASP2P42575 452 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 ATXN3P54252 364 aaPredicted RBP5.08□□□□□ -1.6
UBR1-201ENST00000290650 SLC12A3P55017 1021 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 PPP2R2AP63151 447 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 IL9RQ01113 521 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 SLC29A2Q14542 456 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 MUM1Q2TAK8 710 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 EML3Q32P44 896 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 HABP4Q5JVS0 413 aaKnown RBP5.08□□□□□ -1.6
UBR1-201ENST00000290650 MOB2Q70IA6 237 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 RNF10Q8N5U6 811 aaKnown RBP5.08□□□□□ -1.6
UBR1-201ENST00000290650 CFAP61Q8NHU2 1237 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 TAS1R2Q8TE23 839 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 KLHL29Q96CT2 875 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 ATP6V1G3Q96LB4 118 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 AP5M1Q9H0R1 490 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 SMYD3Q9H7B4 428 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 PFDN4Q9NQP4 134 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 TBX20Q9UMR3 447 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 PLAGL2Q9UPG8 496 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 KDM3BQ7LBC6 1761 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 ZNF142P52746 1687 aaPredicted RBP5.08□□□□□ -1.6
UBR1-201ENST00000290650 WNT10BO00744 389 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 SLITRK3O94933 977 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 TJP3O95049 919 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 RALAP11233 206 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 BRAFP15056 766 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 CHN1P15882 459 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 SOX11P35716 441 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 TCF7P36402 384 aaPredicted RBP5.08□□□□□ -1.6
UBR1-201ENST00000290650 SLC12A2P55011 1212 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 TSTA3Q13630 321 aaPredicted RBP5.08□□□□□ -1.6
UBR1-201ENST00000290650 KYNUQ16719 465 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 CENPPQ6IPU0 288 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 KIF2BQ8N4N8 673 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 DAGLBQ8NCG7 672 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 MRPL4Q9BYD3 311 aaKnown RBP5.08□□□□□ -1.6
UBR1-201ENST00000290650 WDR70Q9NW82 654 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 SNX9Q9Y5X1 595 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 HMGB1P1B2RPK0 211 aaPredicted RBP5.08□□□□□ -1.6
UBR1-201ENST00000290650 GJB1P08034 283 aa5.08□□□□□ -1.6
UBR1-201ENST00000290650 MYO1EQ12965 1108 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms