RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 RPUSD2Q8IZ73 545 aaKnown RBP10.97□□□□□ -0.65
C9orf43-201ENST00000288462 CAGE1Q8TC20 777 aa10.97□□□□□ -0.65
C9orf43-201ENST00000288462 ISCUQ9H1K1 167 aa10.97□□□□□ -0.65
C9orf43-201ENST00000288462 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.97□□□□□ -0.65
C9orf43-201ENST00000288462 TAS2R14Q9NYV8 317 aa10.97□□□□□ -0.65
C9orf43-201ENST00000288462 ANKRD62A6NC57 917 aa10.96□□□□□ -0.65
C9orf43-201ENST00000288462 CES2O00748 559 aa10.96□□□□□ -0.65
C9orf43-201ENST00000288462 CYP26A1O43174 497 aa10.96□□□□□ -0.65
C9orf43-201ENST00000288462 ADCY6O43306 1168 aa10.96□□□□□ -0.65
C9orf43-201ENST00000288462 AP3M2P53677 418 aa10.96□□□□□ -0.65
C9orf43-201ENST00000288462 HADHBP55084 474 aaKnown RBP10.96□□□□□ -0.65
C9orf43-201ENST00000288462 MPZL3Q6UWV2 235 aa10.96□□□□□ -0.65
C9orf43-201ENST00000288462 WDR49Q8IV35 697 aa10.96□□□□□ -0.65
C9orf43-201ENST00000288462 CTNNBL1Q8WYA6 563 aaPredicted RBP10.96□□□□□ -0.65
C9orf43-201ENST00000288462 ZBTB10Q96DT7 871 aa10.96□□□□□ -0.65
C9orf43-201ENST00000288462 NLRP4Q96MN2 994 aa10.96□□□□□ -0.65
C9orf43-201ENST00000288462 PNKPQ96T60 521 aa10.96□□□□□ -0.65
C9orf43-201ENST00000288462 PI4K2AQ9BTU6 479 aa10.96□□□□□ -0.65
C9orf43-201ENST00000288462 CCDC94Q9BW85 323 aaPredicted RBP10.96□□□□□ -0.65
C9orf43-201ENST00000288462 SLC5A4Q9NY91 659 aa10.96□□□□□ -0.65
C9orf43-201ENST00000288462 CPA4Q9UI42 421 aa10.96□□□□□ -0.65
C9orf43-201ENST00000288462 CPSF3Q9UKF6 684 aaKnown RBP10.96□□□□□ -0.65
C9orf43-201ENST00000288462 DOCK3Q8IZD9 2030 aa10.96□□□□□ -0.66
C9orf43-201ENST00000288462 CCDC151A5D8V7 595 aa10.96□□□□□ -0.66
C9orf43-201ENST00000288462 ZRANB2O95218 330 aaKnown RBP eCLIP10.96□□□□□ -0.66
C9orf43-201ENST00000288462 HOXC6P09630 235 aa10.96□□□□□ -0.66
C9orf43-201ENST00000288462 HARSP12081 509 aaKnown RBP10.96□□□□□ -0.66
C9orf43-201ENST00000288462 GZMAP12544 262 aa10.96□□□□□ -0.66
C9orf43-201ENST00000288462 CYP11B1P15538 503 aa10.96□□□□□ -0.66
C9orf43-201ENST00000288462 USP8P40818 1118 aa10.96□□□□□ -0.66
C9orf43-201ENST00000288462 TNFSF9P41273 254 aa10.96□□□□□ -0.66
C9orf43-201ENST00000288462 PHKA2P46019 1235 aa10.96□□□□□ -0.66
C9orf43-201ENST00000288462 FMO1Q01740 532 aa10.96□□□□□ -0.66
C9orf43-201ENST00000288462 MAP2K5Q13163 448 aa10.96□□□□□ -0.66
C9orf43-201ENST00000288462 BRD3Q15059 726 aa10.96□□□□□ -0.66
C9orf43-201ENST00000288462 FAM187BQ17R55 369 aa10.96□□□□□ -0.66
C9orf43-201ENST00000288462 ATF7IP2Q5U623 682 aa10.96□□□□□ -0.66
C9orf43-201ENST00000288462 IQSEC1Q6DN90 963 aa10.96□□□□□ -0.66
C9orf43-201ENST00000288462 ZBTB33Q86T24 672 aa10.96□□□□□ -0.66
C9orf43-201ENST00000288462 SLC47A2Q86VL8 602 aa10.96□□□□□ -0.66
C9orf43-201ENST00000288462 METTL13Q8N6R0 699 aa10.96□□□□□ -0.66
C9orf43-201ENST00000288462 OR6J1Q8NGC5 347 aa10.96□□□□□ -0.66
C9orf43-201ENST00000288462 OR5B17Q8NGF7 314 aa10.96□□□□□ -0.66
C9orf43-201ENST00000288462 DDX1Q92499 740 aaKnown RBP10.96□□□□□ -0.66
C9orf43-201ENST00000288462 DHX38Q92620 1227 aaKnown RBP10.96□□□□□ -0.66
C9orf43-201ENST00000288462 PCDHB18PQ96TA0 734 aa10.96□□□□□ -0.66
C9orf43-201ENST00000288462 MINDY3Q9H8M7 445 aa10.96□□□□□ -0.66
C9orf43-201ENST00000288462 IFT122Q9HBG6 1241 aa10.96□□□□□ -0.66
C9orf43-201ENST00000288462 SEPT11Q9NVA2 429 aaKnown RBP10.96□□□□□ -0.66
C9orf43-201ENST00000288462 RNF14Q9UBS8 474 aa10.96□□□□□ -0.66
C9orf43-201ENST00000288462 ZHX1Q9UKY1 873 aaPredicted RBP10.96□□□□□ -0.66
C9orf43-201ENST00000288462 STXBP5LQ9Y2K9 1186 aa10.96□□□□□ -0.66
C9orf43-201ENST00000288462 TMCO5BA8MYB1 307 aa10.95□□□□□ -0.66
C9orf43-201ENST00000288462 H3BRB1 525 aa10.95□□□□□ -0.66
C9orf43-201ENST00000288462 RTN2O75298 545 aa10.95□□□□□ -0.66
C9orf43-201ENST00000288462 KIF4AO95239 1232 aa10.95□□□□□ -0.66
C9orf43-201ENST00000288462 TUBBP07437 444 aa10.95□□□□□ -0.66
C9orf43-201ENST00000288462 RHOXF2BP0C7M4 288 aa10.95□□□□□ -0.66
C9orf43-201ENST00000288462 CXCR5P32302 372 aa10.95□□□□□ -0.66
C9orf43-201ENST00000288462 NOP2P46087 812 aaKnown RBP10.95□□□□□ -0.66
C9orf43-201ENST00000288462 PDE6CP51160 858 aa10.95□□□□□ -0.66
C9orf43-201ENST00000288462 ZNF157P51786 506 aaPredicted RBP10.95□□□□□ -0.66
C9orf43-201ENST00000288462 IGBP1P78318 339 aa10.95□□□□□ -0.66
C9orf43-201ENST00000288462 CDR2Q01850 454 aa10.95□□□□□ -0.66
C9orf43-201ENST00000288462 BIRC3Q13489 604 aa10.95□□□□□ -0.66
C9orf43-201ENST00000288462 SEZ6Q53EL9 994 aa10.95□□□□□ -0.66
C9orf43-201ENST00000288462 WDR44Q5JSH3 913 aa10.95□□□□□ -0.66
C9orf43-201ENST00000288462 CC2D1AQ6P1N0 951 aaPredicted RBP10.95□□□□□ -0.66
C9orf43-201ENST00000288462 TMCO3Q6UWJ1 677 aa10.95□□□□□ -0.66
C9orf43-201ENST00000288462 SYCE1Q8N0S2 351 aa10.95□□□□□ -0.66
C9orf43-201ENST00000288462 MMGT1Q8N4V1 131 aa10.95□□□□□ -0.66
C9orf43-201ENST00000288462 LMBR1Q8WVP7 490 aa10.95□□□□□ -0.66
C9orf43-201ENST00000288462 USP6NLQ92738 828 aa10.95□□□□□ -0.66
C9orf43-201ENST00000288462 ELMO3Q96BJ8 720 aa10.95□□□□□ -0.66
C9orf43-201ENST00000288462 ARHGEF26Q96DR7 871 aa10.95□□□□□ -0.66
C9orf43-201ENST00000288462 CALR3Q96L12 384 aaKnown RBP10.95□□□□□ -0.66
C9orf43-201ENST00000288462 PSMB7Q99436 277 aa10.95□□□□□ -0.66
C9orf43-201ENST00000288462 ARID3AQ99856 593 aa10.95□□□□□ -0.66
C9orf43-201ENST00000288462 RHOXF2Q9BQY4 288 aa10.95□□□□□ -0.66
C9orf43-201ENST00000288462 THAP2Q9H0W7 228 aa10.95□□□□□ -0.66
C9orf43-201ENST00000288462 TUT1Q9H6E5 874 aaKnown RBP10.95□□□□□ -0.66
C9orf43-201ENST00000288462 PRMT7Q9NVM4 692 aaPredicted RBP10.95□□□□□ -0.66
C9orf43-201ENST00000288462 TNFSF13BQ9Y275 285 aa10.95□□□□□ -0.66
C9orf43-201ENST00000288462 RALGAPA2Q2PPJ7 1873 aa10.95□□□□□ -0.66
C9orf43-201ENST00000288462 KAT6AQ92794 2004 aa10.94□□□□□ -0.66
C9orf43-201ENST00000288462 TARSL2A2RTX5 802 aaKnown RBP10.94□□□□□ -0.66
C9orf43-201ENST00000288462 INO80B-WBP1J3KQ70 363 aa10.94□□□□□ -0.66
C9orf43-201ENST00000288462 B4GALT5O43286 388 aa10.94□□□□□ -0.66
C9orf43-201ENST00000288462 SLC10A3P09131 477 aa10.94□□□□□ -0.66
C9orf43-201ENST00000288462 ACO1P21399 889 aaKnown RBP10.94□□□□□ -0.66
C9orf43-201ENST00000288462 ABCB4P21439 1286 aa10.94□□□□□ -0.66
C9orf43-201ENST00000288462 C2orf54Q08AI8 447 aa10.94□□□□□ -0.66
C9orf43-201ENST00000288462 SURF1Q15526 300 aa10.94□□□□□ -0.66
C9orf43-201ENST00000288462 TAF1CQ15572 869 aaPredicted RBP10.94□□□□□ -0.66
C9orf43-201ENST00000288462 AMHR2Q16671 573 aa10.94□□□□□ -0.66
C9orf43-201ENST00000288462 ZNF568Q3ZCX4 644 aa10.94□□□□□ -0.66
C9orf43-201ENST00000288462 EEF1DP3Q658K8 133 aa10.94□□□□□ -0.66
C9orf43-201ENST00000288462 WDR93Q6P2C0 686 aa10.94□□□□□ -0.66
C9orf43-201ENST00000288462 MTHFD1LQ6UB35 978 aa10.94□□□□□ -0.66
C9orf43-201ENST00000288462 RHOT2Q8IXI1 618 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms