RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 PRMT7Q9NVM4 692 aaPredicted RBP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 RBAKQ9NYW8 714 aaPredicted RBP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 ASAP1Q9ULH1 1129 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 HEY1Q9Y5J3 304 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 RRN3P2A6NIE6 340 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 MFAP3LO75121 409 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 MOCS2O96007 188 aaPredicted RBP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 CYP21A2P08686 494 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 ADORA1P30542 326 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 GEMIN4P57678 1058 aaKnown RBP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 HABP4Q5JVS0 413 aaKnown RBP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 RABGAP1LQ5R372 815 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 C16orf87Q6PH81 154 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 C4orf22Q6V702 233 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 SETD3Q86TU7 594 aaPredicted RBP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 RFFLQ8WZ73 363 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 DNAJC7Q99615 494 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 LSG1Q9H089 658 aaKnown RBP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 VPS11Q9H270 941 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 NOP53Q9NZM5 478 aaKnown RBP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 GABBR1Q9UBS5 961 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 ADAMTS1Q9UHI8 967 aa4.29□□□□□ -1.72
SCN3A-201ENST00000283254 SMG5Q9UPR3 1016 aaKnown RBP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 ATF5Q9Y2D1 282 aaPredicted RBP4.29□□□□□ -1.72
SCN3A-201ENST00000283254 PDS5AQ29RF7 1337 aaKnown RBP4.28□□□□□ -1.72
SCN3A-201ENST00000283254 ZNF335Q9H4Z2 1342 aaPredicted RBP4.28□□□□□ -1.72
SCN3A-201ENST00000283254 CPSF1Q10570 1443 aaKnown RBP4.28□□□□□ -1.72
SCN3A-201ENST00000283254 FRMD3A2A2Y4 597 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 GOLGA8RI6L899 631 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 TBX3O15119 743 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 C21orf2O43822 256 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 GNA15P30679 374 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 S100A5P33763 92 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 GRK3P35626 688 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 ALDH1A3P47895 512 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 ALDH7A1P49419 539 aaKnown RBP4.28□□□□□ -1.72
SCN3A-201ENST00000283254 HARS2P49590 506 aaKnown RBP4.28□□□□□ -1.72
SCN3A-201ENST00000283254 SERPINB9P50453 376 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 STAT5BP51692 787 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 CDH6P55285 790 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 PFKFB3Q16875 520 aaPredicted RBP4.28□□□□□ -1.72
SCN3A-201ENST00000283254 DCAF6Q58WW2 860 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 CYP4A22Q5TCH4 519 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 C1orf146Q5VVC0 180 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 KCTD16Q68DU8 428 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 LRRC8AQ8IWT6 810 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 DDIASQ8IXT1 998 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 GPRC5AQ8NFJ5 357 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 RDM1Q8NG50 284 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 DTNBP1Q96EV8 351 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 CATSPERBQ9H7T0 1116 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 TUFT1Q9NNX1 390 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 ZFP69BQ9UJL9 534 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 RCOR1Q9UKL0 485 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 PDXKO00764 312 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 GYG2O15488 501 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 KRT14P02533 472 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 ATXN8OSP0DMR3 200 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 HMOX2P30519 316 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 GNL1P36915 607 aaPredicted RBP4.28□□□□□ -1.72
SCN3A-201ENST00000283254 HMGCS2P54868 508 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 CSTF3Q12996 717 aaKnown RBP4.28□□□□□ -1.72
SCN3A-201ENST00000283254 PLD1Q13393 1074 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 ALX1Q15699 326 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 PTPROQ16827 1216 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 TMCO4Q5TGY1 634 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 ANKS6Q68DC2 871 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 PCSK9Q8NBP7 692 aaKnown RBP4.28□□□□□ -1.72
SCN3A-201ENST00000283254 RAD54LQ92698 747 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 EPC1Q9H2F5 836 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 DHX35Q9H5Z1 703 aaKnown RBP4.28□□□□□ -1.72
SCN3A-201ENST00000283254 MAD2L2Q9UI95 211 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 AGO2Q9UKV8 859 aaKnown RBP4.28□□□□□ -1.72
SCN3A-201ENST00000283254 SPATA31A6Q5VVP1 1343 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 ENTPD3O75355 529 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 ASMTLO95671 621 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 SUPT20HL2P0C7V6 817 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 ATICP31939 592 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 POU5F1BQ06416 359 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 DHX34Q14147 1143 aaKnown RBP4.28□□□□□ -1.72
SCN3A-201ENST00000283254 DEPDC1Q5TB30 811 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 SARM1Q6SZW1 724 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 CHST13Q8NET6 341 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 KIF12Q96FN5 646 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 PARVBQ9HBI1 364 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 PARVAQ9NVD7 372 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 DCDC2Q9UHG0 476 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 RSPH10B2B2RC85 870 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 CTIFO43310 598 aaKnown RBP4.28□□□□□ -1.72
SCN3A-201ENST00000283254 ZNF500O60304 480 aaPredicted RBP4.28□□□□□ -1.72
SCN3A-201ENST00000283254 TBC1D12O60347 775 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 TADA3O75528 432 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 RSPH10BP0C881 870 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 CYP2C8P10632 490 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 SLCO1A2P46721 670 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 FNTAP49354 379 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 LIG3P49916 1009 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 GTF2A2P52657 109 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 PTH1RQ03431 593 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 KRT31Q15323 416 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms