RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 BBXQ8WY36 941 aaPredicted RBP19.3■□□□□ 0.68
CAPN1-201ENST00000279247 PNMA3Q9UL41 463 aa19.3■□□□□ 0.68
CAPN1-201ENST00000279247 FMO1Q01740 532 aa19.3■□□□□ 0.68
CAPN1-201ENST00000279247 ZNF394Q53GI3 561 aa19.3■□□□□ 0.68
CAPN1-201ENST00000279247 MMGT1Q8N4V1 131 aa19.3■□□□□ 0.68
CAPN1-201ENST00000279247 PTPN18Q99952 460 aa19.3■□□□□ 0.68
CAPN1-201ENST00000279247 DDX47Q9H0S4 455 aaKnown RBP19.3■□□□□ 0.68
CAPN1-201ENST00000279247 NOCTQ9UK39 431 aaKnown RBP19.3■□□□□ 0.68
CAPN1-201ENST00000279247 PRKCBP05771 671 aa19.29■□□□□ 0.68
CAPN1-201ENST00000279247 GLI1P08151 1106 aa19.29■□□□□ 0.68
CAPN1-201ENST00000279247 ITGA4P13612 1032 aa19.29■□□□□ 0.68
CAPN1-201ENST00000279247 SND1Q7KZF4 910 aaKnown RBP eCLIP19.29■□□□□ 0.68
CAPN1-201ENST00000279247 HNRNPLLQ8WVV9 542 aaKnown RBP19.29■□□□□ 0.68
CAPN1-201ENST00000279247 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.29■□□□□ 0.68
CAPN1-201ENST00000279247 ZBTB42B2RXF5 422 aa19.29■□□□□ 0.68
CAPN1-201ENST00000279247 HEXIM1O94992 359 aaKnown RBP19.29■□□□□ 0.68
CAPN1-201ENST00000279247 ANXA13P27216 316 aa19.29■□□□□ 0.68
CAPN1-201ENST00000279247 CCDC62Q6P9F0 684 aa19.29■□□□□ 0.68
CAPN1-201ENST00000279247 AFG1LQ8WV93 481 aa19.29■□□□□ 0.68
CAPN1-201ENST00000279247 CPA5Q8WXQ8 436 aa19.29■□□□□ 0.68
CAPN1-201ENST00000279247 ZNF653Q96CK0 615 aa19.29■□□□□ 0.68
CAPN1-201ENST00000279247 EPB41L5Q9HCM4 733 aa19.29■□□□□ 0.68
CAPN1-201ENST00000279247 NOC2LQ9Y3T9 749 aaKnown RBP19.29■□□□□ 0.68
CAPN1-201ENST00000279247 HTTP42858 3142 aa19.28■□□□□ 0.68
CAPN1-201ENST00000279247 A0A0B4J269 797 aa19.28■□□□□ 0.68
CAPN1-201ENST00000279247 BTNL10A8MVZ5 291 aa19.28■□□□□ 0.68
CAPN1-201ENST00000279247 MAPK6Q16659 721 aa19.28■□□□□ 0.68
CAPN1-201ENST00000279247 TMEM270Q6UE05 265 aa19.28■□□□□ 0.68
CAPN1-201ENST00000279247 CCNI2Q6ZMN8 369 aaPredicted RBP19.28■□□□□ 0.68
CAPN1-201ENST00000279247 AFAP1L1Q8TED9 768 aa19.28■□□□□ 0.68
CAPN1-201ENST00000279247 SCFD2Q8WU76 684 aa19.28■□□□□ 0.68
CAPN1-201ENST00000279247 FAM53CQ9NYF3 392 aa19.28■□□□□ 0.68
CAPN1-201ENST00000279247 STIM2Q9P246 746 aa19.28■□□□□ 0.68
CAPN1-201ENST00000279247 COQ4Q9Y3A0 265 aa19.28■□□□□ 0.68
CAPN1-201ENST00000279247 LOC285556D6RIA3 1793 aa19.28■□□□□ 0.68
CAPN1-201ENST00000279247 ITGBL1O95965 494 aaPredicted RBP19.28■□□□□ 0.68
CAPN1-201ENST00000279247 CD58P19256 250 aa19.28■□□□□ 0.68
CAPN1-201ENST00000279247 TFAMQ00059 246 aaKnown RBP19.28■□□□□ 0.68
CAPN1-201ENST00000279247 PSMD6Q15008 389 aa19.28■□□□□ 0.68
CAPN1-201ENST00000279247 SLFN12LQ6IEE8 588 aa19.28■□□□□ 0.68
CAPN1-201ENST00000279247 ZBTB8OSQ8IWT0 167 aa19.28■□□□□ 0.68
CAPN1-201ENST00000279247 USP38Q8NB14 1042 aa19.28■□□□□ 0.68
CAPN1-201ENST00000279247 RIN2Q8WYP3 895 aaPredicted RBP19.28■□□□□ 0.68
CAPN1-201ENST00000279247 FAM167AQ96KS9 214 aa19.28■□□□□ 0.68
CAPN1-201ENST00000279247 VNN1O95497 513 aa19.27■□□□□ 0.68
CAPN1-201ENST00000279247 MARCKSL1P49006 195 aa19.27■□□□□ 0.68
CAPN1-201ENST00000279247 ZACNQ401N2 412 aa19.27■□□□□ 0.68
CAPN1-201ENST00000279247 SCARA5Q6ZMJ2 495 aa19.27■□□□□ 0.68
CAPN1-201ENST00000279247 FMNL3Q8IVF7 1028 aa19.27■□□□□ 0.68
CAPN1-201ENST00000279247 SYCE1Q8N0S2 351 aa19.27■□□□□ 0.68
CAPN1-201ENST00000279247 TMEM174Q8WUU8 243 aa19.27■□□□□ 0.68
CAPN1-201ENST00000279247 SCLT1Q96NL6 688 aa19.27■□□□□ 0.68
CAPN1-201ENST00000279247 SELENOOQ9BVL4 669 aa19.27■□□□□ 0.68
CAPN1-201ENST00000279247 MTMR12Q9C0I1 747 aa19.27■□□□□ 0.68
CAPN1-201ENST00000279247 APOBEC3GQ9HC16 384 aaKnown RBP19.27■□□□□ 0.68
CAPN1-201ENST00000279247 ZHX1Q9UKY1 873 aaPredicted RBP19.27■□□□□ 0.68
CAPN1-201ENST00000279247 A0A0G2JMZ2 1700 aa19.27■□□□□ 0.68
CAPN1-201ENST00000279247 KRIT1O00522 736 aa19.27■□□□□ 0.68
CAPN1-201ENST00000279247 GPC5P78333 572 aa19.27■□□□□ 0.68
CAPN1-201ENST00000279247 CCNA1P78396 465 aa19.27■□□□□ 0.68
CAPN1-201ENST00000279247 MRPL4Q9BYD3 311 aaKnown RBP19.27■□□□□ 0.68
CAPN1-201ENST00000279247 MINDY3Q9H8M7 445 aa19.27■□□□□ 0.68
CAPN1-201ENST00000279247 INTUQ9ULD6 942 aa19.27■□□□□ 0.68
CAPN1-201ENST00000279247 PCDHB4Q9Y5E5 795 aa19.27■□□□□ 0.68
CAPN1-201ENST00000279247 FGGP02679 453 aa19.27■□□□□ 0.67
CAPN1-201ENST00000279247 CFHP08603 1231 aa19.27■□□□□ 0.67
CAPN1-201ENST00000279247 INSRRP14616 1297 aa19.27■□□□□ 0.67
CAPN1-201ENST00000279247 IER5Q5VY09 327 aa19.27■□□□□ 0.67
CAPN1-201ENST00000279247 SMARCAD1Q9H4L7 1026 aa19.27■□□□□ 0.67
CAPN1-201ENST00000279247 AKT3Q9Y243 479 aa19.27■□□□□ 0.67
CAPN1-201ENST00000279247 ALG6Q9Y672 507 aa19.27■□□□□ 0.67
CAPN1-201ENST00000279247 TARSL2A2RTX5 802 aaKnown RBP19.26■□□□□ 0.67
CAPN1-201ENST00000279247 ASB14A6NK59 587 aa19.26■□□□□ 0.67
CAPN1-201ENST00000279247 MAP2K7O14733 419 aa19.26■□□□□ 0.67
CAPN1-201ENST00000279247 RAD51CO43502 376 aa19.26■□□□□ 0.67
CAPN1-201ENST00000279247 MSCO60682 206 aa19.26■□□□□ 0.67
CAPN1-201ENST00000279247 RTN2O75298 545 aa19.26■□□□□ 0.67
CAPN1-201ENST00000279247 CST3P01034 146 aaPredicted RBP19.26■□□□□ 0.67
CAPN1-201ENST00000279247 C4BPAP04003 597 aaKnown RBP19.26■□□□□ 0.67
CAPN1-201ENST00000279247 VTNP04004 478 aa19.26■□□□□ 0.67
CAPN1-201ENST00000279247 CETPP11597 493 aa19.26■□□□□ 0.67
CAPN1-201ENST00000279247 CARSP49589 748 aaKnown RBP19.26■□□□□ 0.67
CAPN1-201ENST00000279247 GUCY2FP51841 1108 aa19.26■□□□□ 0.67
CAPN1-201ENST00000279247 MAP9Q49MG5 647 aa19.26■□□□□ 0.67
CAPN1-201ENST00000279247 KRT35Q92764 455 aa19.26■□□□□ 0.67
CAPN1-201ENST00000279247 NUP85Q9BW27 656 aa19.26■□□□□ 0.67
CAPN1-201ENST00000279247 KIAA1586Q9HCI6 787 aa19.26■□□□□ 0.67
CAPN1-201ENST00000279247 NFU1Q9UMS0 254 aa19.26■□□□□ 0.67
CAPN1-201ENST00000279247 A0A0A6YYK5 440 aaPredicted RBP19.26■□□□□ 0.67
CAPN1-201ENST00000279247 PGRMC1O00264 195 aaKnown RBP19.26■□□□□ 0.67
CAPN1-201ENST00000279247 EEF1DP3Q658K8 133 aa19.26■□□□□ 0.67
CAPN1-201ENST00000279247 NR2E1Q9Y466 385 aa19.26■□□□□ 0.67
CAPN1-201ENST00000279247 NUB1Q9Y5A7 615 aa19.26■□□□□ 0.67
CAPN1-201ENST00000279247 ZNF157P51786 506 aaPredicted RBP19.25■□□□□ 0.67
CAPN1-201ENST00000279247 NOP14P78316 857 aaKnown RBP19.25■□□□□ 0.67
CAPN1-201ENST00000279247 NCOA4Q13772 614 aa19.25■□□□□ 0.67
CAPN1-201ENST00000279247 ZNF568Q3ZCX4 644 aa19.25■□□□□ 0.67
CAPN1-201ENST00000279247 DAB2IPQ5VWQ8 1189 aa19.25■□□□□ 0.67
CAPN1-201ENST00000279247 KCNV1Q6PIU1 500 aa19.25■□□□□ 0.67
CAPN1-201ENST00000279247 TMEM192Q8IY95 271 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms