RNA–Protein interactions for RNA: ENST00000279052.10

ERGIC3-201, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 2,846 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-201ENST00000279052 SNX12Q9UMY4 172 aa11.26□□□□□ -0.61
ERGIC3-201ENST00000279052 FLT4P35916 1363 aa11.25□□□□□ -0.61
ERGIC3-201ENST00000279052 HOXC13P31276 330 aa11.25□□□□□ -0.61
ERGIC3-201ENST00000279052 PTGS2P35354 604 aa11.25□□□□□ -0.61
ERGIC3-201ENST00000279052 HSD17B2P37059 387 aa11.25□□□□□ -0.61
ERGIC3-201ENST00000279052 PAFAH1B1P43034 410 aa11.25□□□□□ -0.61
ERGIC3-201ENST00000279052 RASSF2P50749 326 aa11.25□□□□□ -0.61
ERGIC3-201ENST00000279052 TIGD2Q4W5G0 525 aa11.25□□□□□ -0.61
ERGIC3-201ENST00000279052 SPATA1Q5VX52 437 aa11.25□□□□□ -0.61
ERGIC3-201ENST00000279052 METTL3Q86U44 580 aaKnown RBP11.25□□□□□ -0.61
ERGIC3-201ENST00000279052 FAM9CQ8IZT9 166 aa11.25□□□□□ -0.61
ERGIC3-201ENST00000279052 SLC22A8Q8TCC7 542 aa11.25□□□□□ -0.61
ERGIC3-201ENST00000279052 ARMC7Q9H6L4 198 aa11.25□□□□□ -0.61
ERGIC3-201ENST00000279052 TMEM206Q9H813 350 aa11.25□□□□□ -0.61
ERGIC3-201ENST00000279052 A8MX80 341 aa11.25□□□□□ -0.61
ERGIC3-201ENST00000279052 HEXIM1O94992 359 aaKnown RBP11.25□□□□□ -0.61
ERGIC3-201ENST00000279052 CD53P19397 219 aa11.25□□□□□ -0.61
ERGIC3-201ENST00000279052 TBXAS1P24557 533 aaPredicted RBP11.25□□□□□ -0.61
ERGIC3-201ENST00000279052 KRT20P35900 424 aa11.25□□□□□ -0.61
ERGIC3-201ENST00000279052 NEK3P51956 506 aa11.25□□□□□ -0.61
ERGIC3-201ENST00000279052 STK4Q13043 487 aa11.25□□□□□ -0.61
ERGIC3-201ENST00000279052 TLCD1Q96CP7 247 aa11.25□□□□□ -0.61
ERGIC3-201ENST00000279052 CFAP36Q96G28 342 aa11.25□□□□□ -0.61
ERGIC3-201ENST00000279052 PHF12Q96QT6 1004 aa11.25□□□□□ -0.61
ERGIC3-201ENST00000279052 EYA1Q99502 592 aa11.25□□□□□ -0.61
ERGIC3-201ENST00000279052 WDR6Q9NNW5 1121 aaKnown RBP11.25□□□□□ -0.61
ERGIC3-201ENST00000279052 WASH6PQ9NQA3 447 aa11.25□□□□□ -0.61
ERGIC3-201ENST00000279052 STX18Q9P2W9 335 aaKnown RBP11.25□□□□□ -0.61
ERGIC3-201ENST00000279052 RABGEF1Q9UJ41 708 aa11.25□□□□□ -0.61
ERGIC3-201ENST00000279052 DNM3Q9UQ16 869 aa11.25□□□□□ -0.61
ERGIC3-201ENST00000279052 GPSM3Q9Y4H4 160 aa11.25□□□□□ -0.61
ERGIC3-201ENST00000279052 INO80B-WBP1J3KQ70 363 aa11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 RGS13O14921 159 aa11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 OR5F1O95221 314 aa11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 GZMAP12544 262 aa11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 PHKA2P46019 1235 aa11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 KCNC4Q03721 635 aa11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 SMARCB1Q12824 385 aa11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 KHDC1Q4VXA5 237 aaKnown RBP11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 NET1Q7Z628 596 aaPredicted RBP11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 KBTBD2Q8IY47 623 aa11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 ADSSL1Q8N142 457 aa11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 EIF1ADQ8N9N8 165 aaKnown RBP11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 FLAD1Q8NFF5 587 aa11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 FLCNQ8NFG4 579 aa11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 OSBPL6Q9BZF3 934 aa11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 SMARCAD1Q9H4L7 1026 aa11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 RNF41Q9H4P4 317 aaPredicted RBP11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 THAP9Q9H5L6 903 aa11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 QTRT2Q9H974 415 aaKnown RBP11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 NLRC4Q9NPP4 1024 aa11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 INTS9Q9NV88 658 aaKnown RBP11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 ZC3H7BQ9UGR2 993 aaKnown RBP11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 EPN1Q9Y6I3 576 aaPredicted RBP11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 MYH15Q9Y2K3 1946 aa11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 HDAC3O15379 428 aa11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 EXTL3O43909 919 aa11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 RNASEH1O60930 286 aaKnown RBP11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 NDUFA10O95299 355 aa11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 MARSP56192 900 aaKnown RBP11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 P2RX3P56373 397 aa11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 MAPRE2Q15555 327 aa11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 GRIK5Q16478 980 aa11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 METTL11BQ5VVY1 283 aa11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 METTL2BQ6P1Q9 378 aaKnown RBP11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 OR2W6PQ8NHA6 318 aa11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 TTLL11Q8NHH1 800 aa11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 ZNF512BQ96KM6 892 aaPredicted RBP11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 CCDC138Q96M89 665 aa11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 INPP4AQ96PE3 977 aaPredicted RBP11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 NOX5Q96PH1 765 aa11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 FANCFQ9NPI8 374 aa11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 PEAK1Q9H792 1746 aa11.24□□□□□ -0.61
ERGIC3-201ENST00000279052 H3BUI4 141 aa11.23□□□□□ -0.61
ERGIC3-201ENST00000279052 FOXN3O00409 490 aaPredicted RBP11.23□□□□□ -0.61
ERGIC3-201ENST00000279052 ZBTB11O95625 1053 aaPredicted RBP11.23□□□□□ -0.61
ERGIC3-201ENST00000279052 PRLP01236 227 aa11.23□□□□□ -0.61
ERGIC3-201ENST00000279052 TFPTP0C1Z6 253 aa11.23□□□□□ -0.61
ERGIC3-201ENST00000279052 P4HA1P13674 534 aa11.23□□□□□ -0.61
ERGIC3-201ENST00000279052 HOXB1P14653 301 aaPredicted RBP11.23□□□□□ -0.61
ERGIC3-201ENST00000279052 MARK3P27448 753 aa11.23□□□□□ -0.61
ERGIC3-201ENST00000279052 ATN1P54259 1190 aaPredicted RBP11.23□□□□□ -0.61
ERGIC3-201ENST00000279052 HSP90AA4PQ58FG1 418 aa11.23□□□□□ -0.61
ERGIC3-201ENST00000279052 PPP6R3Q5H9R7 873 aaPredicted RBP11.23□□□□□ -0.61
ERGIC3-201ENST00000279052 CYP4A22Q5TCH4 519 aa11.23□□□□□ -0.61
ERGIC3-201ENST00000279052 INTS8Q75QN2 995 aaKnown RBP11.23□□□□□ -0.61
ERGIC3-201ENST00000279052 CENPSQ8N2Z9 138 aa11.23□□□□□ -0.61
ERGIC3-201ENST00000279052 TBC1D16Q8TBP0 767 aa11.23□□□□□ -0.61
ERGIC3-201ENST00000279052 BIRC8Q96P09 236 aa11.23□□□□□ -0.61
ERGIC3-201ENST00000279052 TBC1D10AQ9BXI6 508 aa11.23□□□□□ -0.61
ERGIC3-201ENST00000279052 RBM38Q9H0Z9 239 aaKnown RBP11.23□□□□□ -0.61
ERGIC3-201ENST00000279052 ABHD10Q9NUJ1 306 aa11.23□□□□□ -0.61
ERGIC3-201ENST00000279052 VPS51Q9UID3 782 aa11.23□□□□□ -0.61
ERGIC3-201ENST00000279052 CLEC11AQ9Y240 323 aa11.23□□□□□ -0.61
ERGIC3-201ENST00000279052 EID1Q9Y6B2 187 aa11.23□□□□□ -0.61
ERGIC3-201ENST00000279052 GOLGA8QA0A0J9YX86 632 aa11.23□□□□□ -0.61
ERGIC3-201ENST00000279052 GOLGA8OA6NCC3 632 aa11.23□□□□□ -0.61
ERGIC3-201ENST00000279052 DCDC2CA8MYV0 355 aa11.23□□□□□ -0.61
ERGIC3-201ENST00000279052 GOLGA8NF8WBI6 632 aa11.23□□□□□ -0.61
ERGIC3-201ENST00000279052 H7C0C1 242 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms