RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 GPD1LQ8N335 351 aa8.41□□□□□ -1.06
LIMD1-201ENST00000273317 ZNF280CQ8ND82 737 aa8.41□□□□□ -1.06
LIMD1-201ENST00000273317 THOC1Q96FV9 657 aaKnown RBP8.41□□□□□ -1.06
LIMD1-201ENST00000273317 ANKRD27Q96NW4 1050 aa8.41□□□□□ -1.06
LIMD1-201ENST00000273317 ADNPQ9H2P0 1102 aa8.41□□□□□ -1.06
LIMD1-201ENST00000273317 WDR35Q9P2L0 1181 aa8.41□□□□□ -1.06
LIMD1-201ENST00000273317 PLA2R1Q13018 1463 aa8.4□□□□□ -1.06
LIMD1-201ENST00000273317 ARIH2O95376 493 aa8.4□□□□□ -1.06
LIMD1-201ENST00000273317 NCAPHQ15003 741 aa8.4□□□□□ -1.06
LIMD1-201ENST00000273317 UBE2SQ16763 222 aa8.4□□□□□ -1.06
LIMD1-201ENST00000273317 STRBPQ96SI9 672 aaKnown RBP8.4□□□□□ -1.06
LIMD1-201ENST00000273317 BARHL2Q9NY43 387 aa8.4□□□□□ -1.06
LIMD1-201ENST00000273317 VPS9D1Q9Y2B5 631 aa8.4□□□□□ -1.06
LIMD1-201ENST00000273317 MYL2P10916 166 aa8.4□□□□□ -1.06
LIMD1-201ENST00000273317 PEX3P56589 373 aa8.4□□□□□ -1.06
LIMD1-201ENST00000273317 GRAPQ13588 217 aa8.4□□□□□ -1.06
LIMD1-201ENST00000273317 MFN1Q8IWA4 741 aa8.4□□□□□ -1.06
LIMD1-201ENST00000273317 GRAPLQ8TC17 118 aaPredicted RBP8.4□□□□□ -1.06
LIMD1-201ENST00000273317 SNX12Q9UMY4 172 aa8.4□□□□□ -1.06
LIMD1-201ENST00000273317 CPDO75976 1380 aa8.4□□□□□ -1.06
LIMD1-201ENST00000273317 TARBP1Q13395 1621 aaKnown RBP8.4□□□□□ -1.06
LIMD1-201ENST00000273317 PLEKHA8P1O95397 391 aa8.4□□□□□ -1.06
LIMD1-201ENST00000273317 RALBP11234 206 aa8.4□□□□□ -1.06
LIMD1-201ENST00000273317 GCLMP48507 274 aa8.4□□□□□ -1.06
LIMD1-201ENST00000273317 ALDH18A1P54886 795 aaKnown RBP8.4□□□□□ -1.06
LIMD1-201ENST00000273317 RAD51Q06609 339 aa8.4□□□□□ -1.06
LIMD1-201ENST00000273317 KBTBD12Q3ZCT8 623 aa8.4□□□□□ -1.06
LIMD1-201ENST00000273317 PHF21AQ96BD5 680 aa8.4□□□□□ -1.06
LIMD1-201ENST00000273317 ROPN1BQ9BZX4 212 aaPredicted RBP8.4□□□□□ -1.06
LIMD1-201ENST00000273317 ROPN1Q9HAT0 212 aaPredicted RBP8.4□□□□□ -1.06
LIMD1-201ENST00000273317 FAM32AQ9Y421 112 aaKnown RBP8.4□□□□□ -1.06
LIMD1-201ENST00000273317 MAGI3Q5TCQ9 1506 aa8.4□□□□□ -1.06
LIMD1-201ENST00000273317 PDS5AQ29RF7 1337 aaKnown RBP8.4□□□□□ -1.06
LIMD1-201ENST00000273317 FBXW4P57775 412 aa8.4□□□□□ -1.06
LIMD1-201ENST00000273317 GUCY1A3Q02108 690 aa8.4□□□□□ -1.06
LIMD1-201ENST00000273317 AARS2Q5JTZ9 985 aaKnown RBP8.4□□□□□ -1.06
LIMD1-201ENST00000273317 LONP2Q86WA8 852 aa8.4□□□□□ -1.06
LIMD1-201ENST00000273317 PASD1Q8IV76 773 aa8.4□□□□□ -1.06
LIMD1-201ENST00000273317 HOMEZQ8IX15 550 aa8.4□□□□□ -1.06
LIMD1-201ENST00000273317 CALML6Q8TD86 181 aa8.4□□□□□ -1.06
LIMD1-201ENST00000273317 KRT87PA6NCN2 255 aa8.4□□□□□ -1.06
LIMD1-201ENST00000273317 FDX1P10109 184 aa8.4□□□□□ -1.06
LIMD1-201ENST00000273317 HSD17B4P51659 736 aa8.4□□□□□ -1.06
LIMD1-201ENST00000273317 PSMC5P62195 406 aa8.4□□□□□ -1.06
LIMD1-201ENST00000273317 CDC42EP1Q00587 391 aa8.4□□□□□ -1.06
LIMD1-201ENST00000273317 ERFEQ4G0M1 354 aa8.4□□□□□ -1.06
LIMD1-201ENST00000273317 PLEKHM3Q6ZWE6 761 aa8.4□□□□□ -1.06
LIMD1-201ENST00000273317 C11orf70Q9BRQ4 267 aa8.4□□□□□ -1.06
LIMD1-201ENST00000273317 SRP72O76094 671 aaKnown RBP8.4□□□□□ -1.06
LIMD1-201ENST00000273317 KCNA3P22001 575 aa8.4□□□□□ -1.06
LIMD1-201ENST00000273317 HORMAD1Q86X24 394 aa8.4□□□□□ -1.06
LIMD1-201ENST00000273317 CYGBQ8WWM9 190 aa8.4□□□□□ -1.06
LIMD1-201ENST00000273317 ABHD8Q96I13 439 aa8.4□□□□□ -1.06
LIMD1-201ENST00000273317 RMDN3Q96TC7 470 aa8.4□□□□□ -1.06
LIMD1-201ENST00000273317 UTYO14607 1347 aa8.4□□□□□ -1.07
LIMD1-201ENST00000273317 KDM6AO15550 1401 aaPredicted RBP8.4□□□□□ -1.07
LIMD1-201ENST00000273317 ZNF235Q14590 738 aa8.4□□□□□ -1.07
LIMD1-201ENST00000273317 PTPN21Q16825 1174 aa8.4□□□□□ -1.07
LIMD1-201ENST00000273317 RCSD1Q6JBY9 416 aa8.4□□□□□ -1.07
LIMD1-201ENST00000273317 THAP11Q96EK4 314 aa8.4□□□□□ -1.07
LIMD1-201ENST00000273317 PRMT1Q99873 361 aaKnown RBP8.4□□□□□ -1.07
LIMD1-201ENST00000273317 STK33Q9BYT3 514 aa8.4□□□□□ -1.07
LIMD1-201ENST00000273317 AP4S1Q9Y587 144 aa8.4□□□□□ -1.07
LIMD1-201ENST00000273317 ZNF197O14709 1029 aa8.4□□□□□ -1.07
LIMD1-201ENST00000273317 PRKAB2O43741 272 aa8.4□□□□□ -1.07
LIMD1-201ENST00000273317 RALAP11233 206 aa8.4□□□□□ -1.07
LIMD1-201ENST00000273317 ACADSP16219 412 aa8.4□□□□□ -1.07
LIMD1-201ENST00000273317 PSMA3P25788 255 aa8.4□□□□□ -1.07
LIMD1-201ENST00000273317 SERPINB1P30740 379 aa8.4□□□□□ -1.07
LIMD1-201ENST00000273317 STXBP2Q15833 593 aa8.4□□□□□ -1.07
LIMD1-201ENST00000273317 KCNV1Q6PIU1 500 aa8.4□□□□□ -1.07
LIMD1-201ENST00000273317 CCDC24Q8N4L8 307 aa8.4□□□□□ -1.07
LIMD1-201ENST00000273317 NSUN6Q8TEA1 469 aaKnown RBP8.4□□□□□ -1.07
LIMD1-201ENST00000273317 DYNLL2Q96FJ2 89 aa8.4□□□□□ -1.07
LIMD1-201ENST00000273317 UBN2Q6ZU65 1347 aa8.4□□□□□ -1.07
LIMD1-201ENST00000273317 A0A1B0GTH6 734 aa8.4□□□□□ -1.07
LIMD1-201ENST00000273317 ORC4O43929 436 aa8.4□□□□□ -1.07
LIMD1-201ENST00000273317 PPP1R37O75864 691 aa8.4□□□□□ -1.07
LIMD1-201ENST00000273317 MARK3P27448 753 aa8.4□□□□□ -1.07
LIMD1-201ENST00000273317 DSG1Q02413 1049 aa8.4□□□□□ -1.07
LIMD1-201ENST00000273317 TTC23LQ6PF05 361 aa8.4□□□□□ -1.07
LIMD1-201ENST00000273317 LVRNQ6Q4G3 990 aa8.4□□□□□ -1.07
LIMD1-201ENST00000273317 PSD3Q9NYI0 1048 aa8.4□□□□□ -1.07
LIMD1-201ENST00000273317 ZC3H7BQ9UGR2 993 aaKnown RBP8.4□□□□□ -1.07
LIMD1-201ENST00000273317 PDXKO00764 312 aa8.39□□□□□ -1.07
LIMD1-201ENST00000273317 POU5F1BQ06416 359 aa8.39□□□□□ -1.07
LIMD1-201ENST00000273317 ADRM1Q16186 407 aa8.39□□□□□ -1.07
LIMD1-201ENST00000273317 FAM102AQ5T9C2 384 aaPredicted RBP8.39□□□□□ -1.07
LIMD1-201ENST00000273317 FOPNLQ96NB1 174 aa8.39□□□□□ -1.07
LIMD1-201ENST00000273317 HEMGNQ9BXL5 484 aa8.39□□□□□ -1.07
LIMD1-201ENST00000273317 LIMA1Q9UHB6 759 aaKnown RBP8.39□□□□□ -1.07
LIMD1-201ENST00000273317 NPHP4O75161 1426 aaPredicted RBP8.39□□□□□ -1.07
LIMD1-201ENST00000273317 LOC102724159A0A0B4J2E5 919 aa8.39□□□□□ -1.07
LIMD1-201ENST00000273317 NNMTP40261 264 aa8.39□□□□□ -1.07
LIMD1-201ENST00000273317 MCAMP43121 646 aa8.39□□□□□ -1.07
LIMD1-201ENST00000273317 PWP2Q15269 919 aaKnown RBP8.39□□□□□ -1.07
LIMD1-201ENST00000273317 ANO4Q32M45 955 aa8.39□□□□□ -1.07
LIMD1-201ENST00000273317 RBBP8Q99708 897 aa8.39□□□□□ -1.07
LIMD1-201ENST00000273317 SENP7Q9BQF6 1050 aa8.39□□□□□ -1.07
LIMD1-201ENST00000273317 LZTS1Q9Y250 596 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms