RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 CYP4A22Q5TCH4 519 aa13.39□□□□□ -0.27
UBXN4-201ENST00000272638 SAYSD1Q9NPB0 183 aa13.39□□□□□ -0.27
UBXN4-201ENST00000272638 C4AP0C0L4 1744 aa13.39□□□□□ -0.27
UBXN4-201ENST00000272638 C4BP0C0L5 1744 aa13.39□□□□□ -0.27
UBXN4-201ENST00000272638 GRAP2O75791 330 aa13.39□□□□□ -0.27
UBXN4-201ENST00000272638 DESP17661 470 aa13.39□□□□□ -0.27
UBXN4-201ENST00000272638 BASP1P80723 227 aaKnown RBP13.39□□□□□ -0.27
UBXN4-201ENST00000272638 TMEM62Q0P6H9 643 aa13.39□□□□□ -0.27
UBXN4-201ENST00000272638 EPS8L3Q8TE67 593 aaKnown RBP13.39□□□□□ -0.27
UBXN4-201ENST00000272638 TRAPPC12Q8WVT3 735 aa13.39□□□□□ -0.27
UBXN4-201ENST00000272638 HOXC10Q9NYD6 342 aa13.39□□□□□ -0.27
UBXN4-201ENST00000272638 AGPSO00116 658 aa13.38□□□□□ -0.27
UBXN4-201ENST00000272638 CYP3A4P08684 503 aa13.38□□□□□ -0.27
UBXN4-201ENST00000272638 BACE1P56817 501 aa13.38□□□□□ -0.27
UBXN4-201ENST00000272638 WDR72Q3MJ13 1102 aa13.38□□□□□ -0.27
UBXN4-201ENST00000272638 BBS9Q3SYG4 887 aa13.38□□□□□ -0.27
UBXN4-201ENST00000272638 TADA2BQ86TJ2 420 aa13.38□□□□□ -0.27
UBXN4-201ENST00000272638 ERICH1Q86X53 443 aa13.38□□□□□ -0.27
UBXN4-201ENST00000272638 CCDC60Q8IWA6 550 aaPredicted RBP13.38□□□□□ -0.27
UBXN4-201ENST00000272638 ATP8B4Q8TF62 1192 aa13.38□□□□□ -0.27
UBXN4-201ENST00000272638 HOMER3Q9NSC5 361 aa13.38□□□□□ -0.27
UBXN4-201ENST00000272638 GLI3P10071 1580 aa13.38□□□□□ -0.27
UBXN4-201ENST00000272638 GMNCA6NCL1 334 aa13.38□□□□□ -0.27
UBXN4-201ENST00000272638 VWA5AO00534 786 aa13.38□□□□□ -0.27
UBXN4-201ENST00000272638 SPAG7O75391 227 aa13.38□□□□□ -0.27
UBXN4-201ENST00000272638 VSIG1Q86XK7 387 aa13.38□□□□□ -0.27
UBXN4-201ENST00000272638 AGBL3Q8NEM8 1001 aa13.38□□□□□ -0.27
UBXN4-201ENST00000272638 PWWP2AQ96N64 755 aa13.38□□□□□ -0.27
UBXN4-201ENST00000272638 CYP26B1Q9NR63 512 aa13.38□□□□□ -0.27
UBXN4-201ENST00000272638 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.38□□□□□ -0.27
UBXN4-201ENST00000272638 CACNA1SQ13698 1873 aa13.38□□□□□ -0.27
UBXN4-201ENST00000272638 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.38□□□□□ -0.27
UBXN4-201ENST00000272638 CCNE2O96020 404 aa13.38□□□□□ -0.27
UBXN4-201ENST00000272638 RALAP11233 206 aa13.38□□□□□ -0.27
UBXN4-201ENST00000272638 BRD2P25440 801 aaKnown RBP13.38□□□□□ -0.27
UBXN4-201ENST00000272638 CHRNA3P32297 505 aa13.38□□□□□ -0.27
UBXN4-201ENST00000272638 NCOA4Q13772 614 aa13.38□□□□□ -0.27
UBXN4-201ENST00000272638 MAPK6Q16659 721 aa13.38□□□□□ -0.27
UBXN4-201ENST00000272638 FAM160B1Q5W0V3 765 aa13.38□□□□□ -0.27
UBXN4-201ENST00000272638 CASC4Q6P4E1 433 aa13.38□□□□□ -0.27
UBXN4-201ENST00000272638 RFX6Q8HWS3 928 aa13.38□□□□□ -0.27
UBXN4-201ENST00000272638 RBBP8NLQ8NC74 664 aaPredicted RBP13.38□□□□□ -0.27
UBXN4-201ENST00000272638 RNF169Q8NCN4 708 aa13.38□□□□□ -0.27
UBXN4-201ENST00000272638 ZNF473Q8WTR7 871 aaKnown RBP13.38□□□□□ -0.27
UBXN4-201ENST00000272638 NEUROG2Q9H2A3 272 aa13.38□□□□□ -0.27
UBXN4-201ENST00000272638 TMEM8AQ9HCN3 771 aa13.38□□□□□ -0.27
UBXN4-201ENST00000272638 ERVK-5Q9HDB9 667 aa13.38□□□□□ -0.27
UBXN4-201ENST00000272638 A0A087WUV0 522 aaPredicted RBP13.37□□□□□ -0.27
UBXN4-201ENST00000272638 PIAS1O75925 651 aa13.37□□□□□ -0.27
UBXN4-201ENST00000272638 NLRP11P59045 1033 aaKnown RBP13.37□□□□□ -0.27
UBXN4-201ENST00000272638 ASTE1Q2TB18 679 aaPredicted RBP13.37□□□□□ -0.27
UBXN4-201ENST00000272638 HHATQ5VTY9 493 aa13.37□□□□□ -0.27
UBXN4-201ENST00000272638 PPP1R14CQ8TAE6 165 aa13.37□□□□□ -0.27
UBXN4-201ENST00000272638 SEMA4DQ92854 862 aa13.37□□□□□ -0.27
UBXN4-201ENST00000272638 ARHGEF2Q92974 986 aaKnown RBP13.37□□□□□ -0.27
UBXN4-201ENST00000272638 LBHD1Q9BQE6 289 aaPredicted RBP13.37□□□□□ -0.27
UBXN4-201ENST00000272638 ZSWIM1Q9BR11 485 aa13.37□□□□□ -0.27
UBXN4-201ENST00000272638 NGRNQ9NPE2 291 aaKnown RBP13.37□□□□□ -0.27
UBXN4-201ENST00000272638 H7C0C1 242 aa13.37□□□□□ -0.27
UBXN4-201ENST00000272638 PSMA2P25787 234 aa13.37□□□□□ -0.27
UBXN4-201ENST00000272638 ATP5OP48047 213 aa13.37□□□□□ -0.27
UBXN4-201ENST00000272638 NOP14P78316 857 aaKnown RBP13.37□□□□□ -0.27
UBXN4-201ENST00000272638 ZNF699Q32M78 642 aa13.37□□□□□ -0.27
UBXN4-201ENST00000272638 XKR3Q5GH77 459 aa13.37□□□□□ -0.27
UBXN4-201ENST00000272638 KCNT1Q5JUK3 1230 aa13.37□□□□□ -0.27
UBXN4-201ENST00000272638 PALM2Q8IXS6 379 aa13.37□□□□□ -0.27
UBXN4-201ENST00000272638 GIMAP7Q8NHV1 300 aa13.37□□□□□ -0.27
UBXN4-201ENST00000272638 ZBTB10Q96DT7 871 aa13.37□□□□□ -0.27
UBXN4-201ENST00000272638 HEXIM2Q96MH2 286 aaKnown RBP13.37□□□□□ -0.27
UBXN4-201ENST00000272638 MCEEQ96PE7 176 aa13.37□□□□□ -0.27
UBXN4-201ENST00000272638 PSD3Q9NYI0 1048 aa13.37□□□□□ -0.27
UBXN4-201ENST00000272638 CHN1P15882 459 aa13.37□□□□□ -0.27
UBXN4-201ENST00000272638 OR6B2Q6IFH4 312 aa13.37□□□□□ -0.27
UBXN4-201ENST00000272638 BTNL9Q6UXG8 535 aa13.37□□□□□ -0.27
UBXN4-201ENST00000272638 ANKMY2Q8IV38 441 aa13.37□□□□□ -0.27
UBXN4-201ENST00000272638 DAW1Q8N136 415 aa13.37□□□□□ -0.27
UBXN4-201ENST00000272638 CCDC33Q8N5R6 958 aa13.37□□□□□ -0.27
UBXN4-201ENST00000272638 PARD3BQ8TEW8 1205 aa13.37□□□□□ -0.27
UBXN4-201ENST00000272638 NLRP7Q8WX94 980 aa13.37□□□□□ -0.27
UBXN4-201ENST00000272638 CNKSR2Q8WXI2 1034 aa13.37□□□□□ -0.27
UBXN4-201ENST00000272638 CARD9Q9H257 536 aa13.37□□□□□ -0.27
UBXN4-201ENST00000272638 ALG13Q9NP73 1137 aaKnown RBP13.37□□□□□ -0.27
UBXN4-201ENST00000272638 KCND2Q9NZV8 630 aa13.37□□□□□ -0.27
UBXN4-201ENST00000272638 TTLL3Q9Y4R7 772 aa13.37□□□□□ -0.27
UBXN4-201ENST00000272638 EP400Q96L91 3159 aa13.37□□□□□ -0.27
UBXN4-201ENST00000272638 EXOC1LA0A1B0GW35 172 aa13.36□□□□□ -0.27
UBXN4-201ENST00000272638 TCRBV7S2A1N4TA0A589 114 aa13.36□□□□□ -0.27
UBXN4-201ENST00000272638 GPS1Q13098 491 aa13.36□□□□□ -0.27
UBXN4-201ENST00000272638 MAPK7Q13164 816 aa13.36□□□□□ -0.27
UBXN4-201ENST00000272638 COBLL1Q53SF7 1204 aa13.36□□□□□ -0.27
UBXN4-201ENST00000272638 PCNX4Q63HM2 1172 aa13.36□□□□□ -0.27
UBXN4-201ENST00000272638 ANO5Q75V66 913 aa13.36□□□□□ -0.27
UBXN4-201ENST00000272638 PRMT1Q99873 361 aaKnown RBP13.36□□□□□ -0.27
UBXN4-201ENST00000272638 C10orf88Q9H8K7 445 aa13.36□□□□□ -0.27
UBXN4-201ENST00000272638 MRPL47Q9HD33 250 aaKnown RBP13.36□□□□□ -0.27
UBXN4-201ENST00000272638 H0YCG3 227 aa13.36□□□□□ -0.27
UBXN4-201ENST00000272638 PODXLO00592 558 aa13.36□□□□□ -0.27
UBXN4-201ENST00000272638 PHF2O75151 1096 aa13.36□□□□□ -0.27
UBXN4-201ENST00000272638 GTF2H1P32780 548 aa13.36□□□□□ -0.27
UBXN4-201ENST00000272638 PPP6R3Q5H9R7 873 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms