RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 SECISBP2LQ93073 1101 aaKnown RBP13.09□□□□□ -0.31
SDE2-201ENST00000272091 ARID3AQ99856 593 aa13.09□□□□□ -0.31
SDE2-201ENST00000272091 ADAMTS10Q9H324 1103 aa13.09□□□□□ -0.31
SDE2-201ENST00000272091 APOBEC3GQ9HC16 384 aaKnown RBP13.09□□□□□ -0.31
SDE2-201ENST00000272091 TNFSF13BQ9Y275 285 aa13.09□□□□□ -0.31
SDE2-201ENST00000272091 Q9Y3F1 56 aa13.09□□□□□ -0.31
SDE2-201ENST00000272091 MBLAC1A4D2B0 266 aaPredicted RBP13.09□□□□□ -0.31
SDE2-201ENST00000272091 CTAGE9A4FU28 777 aa13.09□□□□□ -0.31
SDE2-201ENST00000272091 GPR25O00155 361 aa13.09□□□□□ -0.31
SDE2-201ENST00000272091 DYNC1I1O14576 645 aa13.09□□□□□ -0.31
SDE2-201ENST00000272091 ENC1O14682 589 aa13.09□□□□□ -0.31
SDE2-201ENST00000272091 PHKA2P46019 1235 aa13.09□□□□□ -0.31
SDE2-201ENST00000272091 GLYCTKQ8IVS8 523 aa13.09□□□□□ -0.31
SDE2-201ENST00000272091 ZNF710Q8N1W2 664 aa13.09□□□□□ -0.31
SDE2-201ENST00000272091 TMEM130Q8N3G9 435 aa13.09□□□□□ -0.31
SDE2-201ENST00000272091 PPM1KQ8N3J5 372 aa13.09□□□□□ -0.31
SDE2-201ENST00000272091 PDZD7Q9H5P4 517 aa13.09□□□□□ -0.31
SDE2-201ENST00000272091 TNNI1P19237 187 aa13.09□□□□□ -0.31
SDE2-201ENST00000272091 ANXA13P27216 316 aa13.09□□□□□ -0.31
SDE2-201ENST00000272091 NCBP1Q09161 790 aaKnown RBP13.09□□□□□ -0.31
SDE2-201ENST00000272091 SPOPLQ6IQ16 392 aa13.09□□□□□ -0.31
SDE2-201ENST00000272091 NFRKBQ6P4R8 1299 aa13.09□□□□□ -0.31
SDE2-201ENST00000272091 PAXIP1Q6ZW49 1069 aaPredicted RBP13.09□□□□□ -0.31
SDE2-201ENST00000272091 USP37Q86T82 979 aa13.09□□□□□ -0.31
SDE2-201ENST00000272091 CPB2Q96IY4 423 aa13.09□□□□□ -0.31
SDE2-201ENST00000272091 FNBP1Q96RU3 617 aa13.09□□□□□ -0.31
SDE2-201ENST00000272091 CDHR5Q9HBB8 845 aa13.09□□□□□ -0.31
SDE2-201ENST00000272091 NOCTQ9UK39 431 aaKnown RBP13.09□□□□□ -0.31
SDE2-201ENST00000272091 GPR32O75388 356 aa13.08□□□□□ -0.31
SDE2-201ENST00000272091 SGPL1O95470 568 aa13.08□□□□□ -0.31
SDE2-201ENST00000272091 CHRNB2P17787 502 aa13.08□□□□□ -0.31
SDE2-201ENST00000272091 BMS1Q14692 1282 aaKnown RBP13.08□□□□□ -0.31
SDE2-201ENST00000272091 PRMT7Q9NVM4 692 aaPredicted RBP13.08□□□□□ -0.31
SDE2-201ENST00000272091 TAS2R14Q9NYV8 317 aa13.08□□□□□ -0.31
SDE2-201ENST00000272091 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.08□□□□□ -0.31
SDE2-201ENST00000272091 V9GYY5 206 aaPredicted RBP13.08□□□□□ -0.31
SDE2-201ENST00000272091 ATP8B3O60423 1300 aa13.08□□□□□ -0.32
SDE2-201ENST00000272091 UMODL1Q5DID0 1318 aa13.08□□□□□ -0.32
SDE2-201ENST00000272091 PSEN2P49810 448 aa13.08□□□□□ -0.32
SDE2-201ENST00000272091 FCGRTP55899 365 aa13.08□□□□□ -0.32
SDE2-201ENST00000272091 ZNF568Q3ZCX4 644 aa13.08□□□□□ -0.32
SDE2-201ENST00000272091 ALKBH5Q6P6C2 394 aaKnown RBP13.08□□□□□ -0.32
SDE2-201ENST00000272091 EFCAB13Q8IY85 973 aa13.08□□□□□ -0.32
SDE2-201ENST00000272091 NT5C1BQ96P26 610 aa13.08□□□□□ -0.32
SDE2-201ENST00000272091 CARD6Q9BX69 1037 aa13.08□□□□□ -0.32
SDE2-201ENST00000272091 HTTP42858 3142 aa13.08□□□□□ -0.32
SDE2-201ENST00000272091 TSPAN1O60635 241 aa13.08□□□□□ -0.32
SDE2-201ENST00000272091 ARF4P18085 180 aaPredicted RBP13.08□□□□□ -0.32
SDE2-201ENST00000272091 ZNF200P98182 395 aaPredicted RBP13.08□□□□□ -0.32
SDE2-201ENST00000272091 PRKCZQ05513 592 aa13.08□□□□□ -0.32
SDE2-201ENST00000272091 TRAPPC11Q7Z392 1133 aa13.08□□□□□ -0.32
SDE2-201ENST00000272091 NOP9Q86U38 636 aaKnown RBP13.08□□□□□ -0.32
SDE2-201ENST00000272091 THSD7BQ9C0I4 1608 aa13.08□□□□□ -0.32
SDE2-201ENST00000272091 RALGAPA2Q2PPJ7 1873 aa13.08□□□□□ -0.32
SDE2-201ENST00000272091 BUB1O43683 1085 aa13.07□□□□□ -0.32
SDE2-201ENST00000272091 TOMM70O94826 608 aa13.07□□□□□ -0.32
SDE2-201ENST00000272091 CALCAP01258 141 aa13.07□□□□□ -0.32
SDE2-201ENST00000272091 FGFR4P22455 802 aa13.07□□□□□ -0.32
SDE2-201ENST00000272091 HOXC8P31273 242 aa13.07□□□□□ -0.32
SDE2-201ENST00000272091 FLT3LGP49771 235 aa13.07□□□□□ -0.32
SDE2-201ENST00000272091 PAPD7Q5XG87 772 aaKnown RBP13.07□□□□□ -0.32
SDE2-201ENST00000272091 ERO1AQ96HE7 468 aa13.07□□□□□ -0.32
SDE2-201ENST00000272091 TCHPQ9BT92 498 aa13.07□□□□□ -0.32
SDE2-201ENST00000272091 NRCAMQ92823 1304 aa13.07□□□□□ -0.32
SDE2-201ENST00000272091 BTNL10A8MVZ5 291 aa13.07□□□□□ -0.32
SDE2-201ENST00000272091 ZC3H11AO75152 810 aaKnown RBP eCLIP13.07□□□□□ -0.32
SDE2-201ENST00000272091 MYL3P08590 195 aa13.07□□□□□ -0.32
SDE2-201ENST00000272091 MFAP3P55082 362 aa13.07□□□□□ -0.32
SDE2-201ENST00000272091 PURAQ00577 322 aaKnown RBP13.07□□□□□ -0.32
SDE2-201ENST00000272091 SLC47A2Q86VL8 602 aa13.07□□□□□ -0.32
SDE2-201ENST00000272091 THNSL1Q8IYQ7 743 aa13.07□□□□□ -0.32
SDE2-201ENST00000272091 EPS8L1Q8TE68 723 aa13.07□□□□□ -0.32
SDE2-201ENST00000272091 U2AF1L4Q8WU68 220 aaKnown RBP13.07□□□□□ -0.32
SDE2-201ENST00000272091 PCDHB18PQ96TA0 734 aa13.07□□□□□ -0.32
SDE2-201ENST00000272091 AGPAT1Q99943 283 aa13.07□□□□□ -0.32
SDE2-201ENST00000272091 SCN10AQ9Y5Y9 1956 aa13.07□□□□□ -0.32
SDE2-201ENST00000272091 RRN3P2A6NIE6 340 aa13.07□□□□□ -0.32
SDE2-201ENST00000272091 CYP26A1O43174 497 aa13.07□□□□□ -0.32
SDE2-201ENST00000272091 TMOD1P28289 359 aa13.07□□□□□ -0.32
SDE2-201ENST00000272091 PIK3CAP42336 1068 aa13.07□□□□□ -0.32
SDE2-201ENST00000272091 CPT1AP50416 773 aa13.07□□□□□ -0.32
SDE2-201ENST00000272091 CHMP4BP1P59074 171 aa13.07□□□□□ -0.32
SDE2-201ENST00000272091 OSTNP61366 133 aa13.07□□□□□ -0.32
SDE2-201ENST00000272091 GCNT1Q02742 428 aa13.07□□□□□ -0.32
SDE2-201ENST00000272091 TMEM62Q0P6H9 643 aa13.07□□□□□ -0.32
SDE2-201ENST00000272091 WDR49Q8IV35 697 aa13.07□□□□□ -0.32
SDE2-201ENST00000272091 NLRP7Q8WX94 980 aa13.07□□□□□ -0.32
SDE2-201ENST00000272091 CAPNS2Q96L46 248 aa13.07□□□□□ -0.32
SDE2-201ENST00000272091 CDC23Q9UJX2 597 aa13.07□□□□□ -0.32
SDE2-201ENST00000272091 FAM170AA1A519 330 aa13.06□□□□□ -0.32
SDE2-201ENST00000272091 TADA3O75528 432 aa13.06□□□□□ -0.32
SDE2-201ENST00000272091 CST3P01034 146 aaPredicted RBP13.06□□□□□ -0.32
SDE2-201ENST00000272091 AKR1A1P14550 325 aa13.06□□□□□ -0.32
SDE2-201ENST00000272091 FSCN1Q16658 493 aaKnown RBP13.06□□□□□ -0.32
SDE2-201ENST00000272091 KIZQ2M2Z5 673 aa13.06□□□□□ -0.32
SDE2-201ENST00000272091 DDX1Q92499 740 aaKnown RBP13.06□□□□□ -0.32
SDE2-201ENST00000272091 VTI1AQ96AJ9 217 aa13.06□□□□□ -0.32
SDE2-201ENST00000272091 MTMR12Q9C0I1 747 aa13.06□□□□□ -0.32
SDE2-201ENST00000272091 ACO1P21399 889 aaKnown RBP13.06□□□□□ -0.32
SDE2-201ENST00000272091 NOGQ13253 232 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms