RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 TMC3Q7Z5M5 1100 aa13.86□□□□□ -0.19
CPSF6-201ENST00000266679 GPD1LQ8N335 351 aa13.86□□□□□ -0.19
CPSF6-201ENST00000266679 TMC2Q8TDI7 906 aa13.86□□□□□ -0.19
CPSF6-201ENST00000266679 GLG1Q92896 1179 aa13.86□□□□□ -0.19
CPSF6-201ENST00000266679 TATDN2Q93075 761 aa13.86□□□□□ -0.19
CPSF6-201ENST00000266679 MFSD14AQ96MC6 490 aa13.86□□□□□ -0.19
CPSF6-201ENST00000266679 FAM213AQ9BRX8 229 aa13.86□□□□□ -0.19
CPSF6-201ENST00000266679 ATP6V0A4Q9HBG4 840 aa13.86□□□□□ -0.19
CPSF6-201ENST00000266679 RAB20Q9NX57 234 aa13.86□□□□□ -0.19
CPSF6-201ENST00000266679 SLC9A2Q9UBY0 812 aa13.86□□□□□ -0.19
CPSF6-201ENST00000266679 HMGB1P1B2RPK0 211 aaPredicted RBP13.85□□□□□ -0.19
CPSF6-201ENST00000266679 H0YGN5 161 aa13.85□□□□□ -0.19
CPSF6-201ENST00000266679 MYO1CO00159 1063 aa13.85□□□□□ -0.19
CPSF6-201ENST00000266679 KRT5P13647 590 aa13.85□□□□□ -0.19
CPSF6-201ENST00000266679 ACTR2P61160 394 aa13.85□□□□□ -0.19
CPSF6-201ENST00000266679 ZNF844Q08AG5 666 aa13.85□□□□□ -0.19
CPSF6-201ENST00000266679 SEL1L2Q5TEA6 688 aa13.85□□□□□ -0.19
CPSF6-201ENST00000266679 SV2AQ7L0J3 742 aa13.85□□□□□ -0.19
CPSF6-201ENST00000266679 BCAS4Q8TDM0 211 aa13.85□□□□□ -0.19
CPSF6-201ENST00000266679 SEC14L1Q92503 715 aa13.85□□□□□ -0.19
CPSF6-201ENST00000266679 CYP26B1Q9NR63 512 aa13.85□□□□□ -0.19
CPSF6-201ENST00000266679 CYP39A1Q9NYL5 469 aa13.85□□□□□ -0.19
CPSF6-201ENST00000266679 TRPC6Q9Y210 931 aa13.85□□□□□ -0.19
CPSF6-201ENST00000266679 COQ4Q9Y3A0 265 aa13.85□□□□□ -0.19
CPSF6-201ENST00000266679 NFS1Q9Y697 457 aa13.85□□□□□ -0.19
CPSF6-201ENST00000266679 LOC285556D6RIA3 1793 aa13.85□□□□□ -0.19
CPSF6-201ENST00000266679 ANKRD65E5RJM6 399 aa13.84□□□□□ -0.19
CPSF6-201ENST00000266679 TRIM66O15016 1216 aa13.84□□□□□ -0.19
CPSF6-201ENST00000266679 SPOPO43791 374 aa13.84□□□□□ -0.19
CPSF6-201ENST00000266679 DKC1O60832 514 aaKnown RBP eCLIP13.84□□□□□ -0.19
CPSF6-201ENST00000266679 DGAT1O75907 488 aa13.84□□□□□ -0.19
CPSF6-201ENST00000266679 MYZAPP0CAP1 466 aa13.84□□□□□ -0.19
CPSF6-201ENST00000266679 GZMAP12544 262 aa13.84□□□□□ -0.19
CPSF6-201ENST00000266679 IRX5P78411 483 aaPredicted RBP13.84□□□□□ -0.19
CPSF6-201ENST00000266679 CDR2Q01850 454 aa13.84□□□□□ -0.19
CPSF6-201ENST00000266679 DHX9Q08211 1270 aaKnown RBP13.84□□□□□ -0.19
CPSF6-201ENST00000266679 MTMR3Q13615 1198 aa13.84□□□□□ -0.19
CPSF6-201ENST00000266679 LMBRD2Q68DH5 695 aaPredicted RBP13.84□□□□□ -0.19
CPSF6-201ENST00000266679 TAS1R3Q7RTX0 852 aa13.84□□□□□ -0.19
CPSF6-201ENST00000266679 JAMLQ86YT9 394 aa13.84□□□□□ -0.19
CPSF6-201ENST00000266679 APOBEC3FQ8IUX4 373 aaKnown RBP13.84□□□□□ -0.19
CPSF6-201ENST00000266679 MCPH1Q8NEM0 835 aa13.84□□□□□ -0.19
CPSF6-201ENST00000266679 C18orf8Q96DM3 657 aa13.84□□□□□ -0.19
CPSF6-201ENST00000266679 IFT74Q96LB3 600 aa13.84□□□□□ -0.19
CPSF6-201ENST00000266679 FBXL18Q96ME1 805 aa13.84□□□□□ -0.19
CPSF6-201ENST00000266679 ACAD9Q9H845 621 aa13.84□□□□□ -0.19
CPSF6-201ENST00000266679 C17orf75Q9HAS0 396 aa13.84□□□□□ -0.19
CPSF6-201ENST00000266679 A1CFQ9NQ94 594 aaKnown RBP13.84□□□□□ -0.19
CPSF6-201ENST00000266679 ZNF112Q9UJU3 913 aa13.84□□□□□ -0.19
CPSF6-201ENST00000266679 NFASCO94856 1347 aa13.84□□□□□ -0.19
CPSF6-201ENST00000266679 ZEB2O60315 1214 aa13.84□□□□□ -0.19
CPSF6-201ENST00000266679 PHF2O75151 1096 aa13.84□□□□□ -0.19
CPSF6-201ENST00000266679 MTA2O94776 668 aa13.84□□□□□ -0.19
CPSF6-201ENST00000266679 CYP1A2P05177 515 aa13.84□□□□□ -0.19
CPSF6-201ENST00000266679 HPDP32754 393 aaPredicted RBP13.84□□□□□ -0.19
CPSF6-201ENST00000266679 OAZ1P54368 228 aa13.84□□□□□ -0.19
CPSF6-201ENST00000266679 GUCY1A3Q02108 690 aa13.84□□□□□ -0.19
CPSF6-201ENST00000266679 PPARDQ03181 441 aa13.84□□□□□ -0.19
CPSF6-201ENST00000266679 C10orf67Q8IYJ2 551 aa13.84□□□□□ -0.19
CPSF6-201ENST00000266679 RPS6KC1Q96S38 1066 aa13.84□□□□□ -0.19
CPSF6-201ENST00000266679 NTPCRQ9BSD7 190 aaKnown RBP13.84□□□□□ -0.19
CPSF6-201ENST00000266679 BCCIPQ9P287 314 aaKnown RBP eCLIP13.84□□□□□ -0.19
CPSF6-201ENST00000266679 SIP14410 1827 aa13.84□□□□□ -0.19
CPSF6-201ENST00000266679 FAM187AA6NFU0 413 aa13.83□□□□□ -0.2
CPSF6-201ENST00000266679 MYO1FO00160 1098 aa13.83□□□□□ -0.2
CPSF6-201ENST00000266679 MAFGO15525 162 aa13.83□□□□□ -0.2
CPSF6-201ENST00000266679 GTF2H1P32780 548 aa13.83□□□□□ -0.2
CPSF6-201ENST00000266679 MCCD1P59942 119 aaPredicted RBP13.83□□□□□ -0.2
CPSF6-201ENST00000266679 DHX34Q14147 1143 aaKnown RBP13.83□□□□□ -0.2
CPSF6-201ENST00000266679 CLUL1Q15846 466 aa13.83□□□□□ -0.2
CPSF6-201ENST00000266679 PPP2R5EQ16537 467 aa13.83□□□□□ -0.2
CPSF6-201ENST00000266679 DUPD1Q68J44 220 aa13.83□□□□□ -0.2
CPSF6-201ENST00000266679 ABHD15Q6UXT9 468 aa13.83□□□□□ -0.2
CPSF6-201ENST00000266679 CYFIP1Q7L576 1253 aa13.83□□□□□ -0.2
CPSF6-201ENST00000266679 USP37Q86T82 979 aa13.83□□□□□ -0.2
CPSF6-201ENST00000266679 PRELID2Q8N945 189 aa13.83□□□□□ -0.2
CPSF6-201ENST00000266679 C12orf42Q96LP6 360 aa13.83□□□□□ -0.2
CPSF6-201ENST00000266679 FMO2Q99518 471 aa13.83□□□□□ -0.2
CPSF6-201ENST00000266679 ERP44Q9BS26 406 aa13.83□□□□□ -0.2
CPSF6-201ENST00000266679 TEX13BQ9BXU2 312 aa13.83□□□□□ -0.2
CPSF6-201ENST00000266679 WNT8AQ9H1J5 351 aa13.83□□□□□ -0.2
CPSF6-201ENST00000266679 PDLIM7Q9NR12 457 aa13.83□□□□□ -0.2
CPSF6-201ENST00000266679 SNX24Q9Y343 169 aa13.83□□□□□ -0.2
CPSF6-201ENST00000266679 HTTP42858 3142 aa13.83□□□□□ -0.2
CPSF6-201ENST00000266679 TRPA1O75762 1119 aa13.83□□□□□ -0.2
CPSF6-201ENST00000266679 SUPT20HL2P0C7V6 817 aa13.83□□□□□ -0.2
CPSF6-201ENST00000266679 PYGMP11217 842 aa13.83□□□□□ -0.2
CPSF6-201ENST00000266679 GARTP22102 1010 aa13.83□□□□□ -0.2
CPSF6-201ENST00000266679 LIG4P49917 911 aa13.83□□□□□ -0.2
CPSF6-201ENST00000266679 PEX5P50542 639 aa13.83□□□□□ -0.2
CPSF6-201ENST00000266679 EMC2Q15006 297 aa13.83□□□□□ -0.2
CPSF6-201ENST00000266679 SUPT20HL1Q3ZLR7 823 aa13.83□□□□□ -0.2
CPSF6-201ENST00000266679 MIS18BP1Q6P0N0 1132 aa13.83□□□□□ -0.2
CPSF6-201ENST00000266679 C1orf131Q8NDD1 294 aaKnown RBP13.83□□□□□ -0.2
CPSF6-201ENST00000266679 DDX1Q92499 740 aaKnown RBP13.83□□□□□ -0.2
CPSF6-201ENST00000266679 CD101Q93033 1021 aa13.83□□□□□ -0.2
CPSF6-201ENST00000266679 MAGOHBQ96A72 148 aaKnown RBP13.83□□□□□ -0.2
CPSF6-201ENST00000266679 C1orf112Q9NSG2 853 aa13.83□□□□□ -0.2
CPSF6-201ENST00000266679 RASAL2Q9UJF2 1139 aa13.83□□□□□ -0.2
CPSF6-201ENST00000266679 GTF3C4Q9UKN8 822 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms