RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 FAM213AQ9BRX8 229 aa17.96■□□□□ 0.47
SQLE-201ENST00000265896 PDE6CP51160 858 aa17.95■□□□□ 0.46
SQLE-201ENST00000265896 GSCP56915 257 aaPredicted RBP17.95■□□□□ 0.46
SQLE-201ENST00000265896 VSTM1Q6UX27 236 aa17.95■□□□□ 0.46
SQLE-201ENST00000265896 GSTA5Q7RTV2 222 aa17.95■□□□□ 0.46
SQLE-201ENST00000265896 GEMIN8Q9NWZ8 242 aaKnown RBP17.95■□□□□ 0.46
SQLE-201ENST00000265896 FZD1Q9UP38 647 aa17.95■□□□□ 0.46
SQLE-201ENST00000265896 CEP83Q9Y592 693 aa17.95■□□□□ 0.46
SQLE-201ENST00000265896 DENND3A2RUS2 1198 aa17.95■□□□□ 0.46
SQLE-201ENST00000265896 RARGP13631 454 aa17.95■□□□□ 0.46
SQLE-201ENST00000265896 ALDH5A1P51649 535 aaPredicted RBP17.95■□□□□ 0.46
SQLE-201ENST00000265896 CLNS1AP54105 237 aaKnown RBP17.95■□□□□ 0.46
SQLE-201ENST00000265896 PODNQ7Z5L7 613 aa17.95■□□□□ 0.46
SQLE-201ENST00000265896 AGAP11Q8TF27 550 aa17.95■□□□□ 0.46
SQLE-201ENST00000265896 ART4Q93070 314 aa17.95■□□□□ 0.46
SQLE-201ENST00000265896 BICD1Q96G01 975 aa17.95■□□□□ 0.46
SQLE-201ENST00000265896 ACCSQ96QU6 501 aa17.95■□□□□ 0.46
SQLE-201ENST00000265896 RGL2O15211 777 aa17.94■□□□□ 0.46
SQLE-201ENST00000265896 AGTP01019 485 aa17.94■□□□□ 0.46
SQLE-201ENST00000265896 KRT16P08779 473 aa17.94■□□□□ 0.46
SQLE-201ENST00000265896 VIL1P09327 827 aaKnown RBP17.94■□□□□ 0.46
SQLE-201ENST00000265896 NPR1P16066 1061 aa17.94■□□□□ 0.46
SQLE-201ENST00000265896 ERFP50548 548 aa17.94■□□□□ 0.46
SQLE-201ENST00000265896 WNT7BP56706 349 aa17.94■□□□□ 0.46
SQLE-201ENST00000265896 NEDD9Q14511 834 aa17.94■□□□□ 0.46
SQLE-201ENST00000265896 PREPLQ4J6C6 727 aaPredicted RBP17.94■□□□□ 0.46
SQLE-201ENST00000265896 CC2D2BQ6DHV5 1058 aa17.94■□□□□ 0.46
SQLE-201ENST00000265896 PIGWQ7Z7B1 504 aa17.94■□□□□ 0.46
SQLE-201ENST00000265896 C4orf33Q8N1A6 199 aa17.94■□□□□ 0.46
SQLE-201ENST00000265896 FITM2Q8N6M3 262 aa17.94■□□□□ 0.46
SQLE-201ENST00000265896 BSNDQ8WZ55 320 aa17.94■□□□□ 0.46
SQLE-201ENST00000265896 TMEM237Q96Q45 408 aa17.94■□□□□ 0.46
SQLE-201ENST00000265896 ARHGEF10LQ9HCE6 1279 aa17.94■□□□□ 0.46
SQLE-201ENST00000265896 SLCO1B3Q9NPD5 702 aa17.94■□□□□ 0.46
SQLE-201ENST00000265896 PCYOX1Q9UHG3 505 aa17.94■□□□□ 0.46
SQLE-201ENST00000265896 SUGT1Q9Y2Z0 365 aa17.94■□□□□ 0.46
SQLE-201ENST00000265896 WDR91A4D1P6 747 aa17.94■□□□□ 0.46
SQLE-201ENST00000265896 MIF4GDA9UHW6 222 aaKnown RBP17.94■□□□□ 0.46
SQLE-201ENST00000265896 PODXLO00592 558 aa17.94■□□□□ 0.46
SQLE-201ENST00000265896 SNX3O60493 162 aa17.94■□□□□ 0.46
SQLE-201ENST00000265896 CNGA1P29973 690 aa17.94■□□□□ 0.46
SQLE-201ENST00000265896 ELF1P32519 619 aa17.94■□□□□ 0.46
SQLE-201ENST00000265896 ACOT2P49753 483 aa17.94■□□□□ 0.46
SQLE-201ENST00000265896 XRCC4Q13426 336 aa17.94■□□□□ 0.46
SQLE-201ENST00000265896 ZNF394Q53GI3 561 aa17.94■□□□□ 0.46
SQLE-201ENST00000265896 TGS1Q96RS0 853 aaKnown RBP17.94■□□□□ 0.46
SQLE-201ENST00000265896 IDI2Q9BXS1 227 aa17.94■□□□□ 0.46
SQLE-201ENST00000265896 DNAH12Q6ZR08 3092 aa17.94■□□□□ 0.46
SQLE-201ENST00000265896 EZRP15311 586 aaKnown RBP17.94■□□□□ 0.46
SQLE-201ENST00000265896 STX2P32856 288 aa17.94■□□□□ 0.46
SQLE-201ENST00000265896 FASTKD3Q14CZ7 662 aaKnown RBP17.94■□□□□ 0.46
SQLE-201ENST00000265896 SV2AQ7L0J3 742 aa17.94■□□□□ 0.46
SQLE-201ENST00000265896 FAM71AQ8IYT1 594 aa17.94■□□□□ 0.46
SQLE-201ENST00000265896 CD101Q93033 1021 aa17.94■□□□□ 0.46
SQLE-201ENST00000265896 KLHL29Q96CT2 875 aa17.94■□□□□ 0.46
SQLE-201ENST00000265896 TAAR1Q96RJ0 339 aa17.94■□□□□ 0.46
SQLE-201ENST00000265896 MXRA8Q9BRK3 442 aa17.94■□□□□ 0.46
SQLE-201ENST00000265896 TAOK3Q9H2K8 898 aa17.94■□□□□ 0.46
SQLE-201ENST00000265896 KDM4CQ9H3R0 1056 aa17.94■□□□□ 0.46
SQLE-201ENST00000265896 MCM8Q9UJA3 840 aa17.94■□□□□ 0.46
SQLE-201ENST00000265896 HOXA7P31268 230 aaPredicted RBP17.93■□□□□ 0.46
SQLE-201ENST00000265896 MMP14P50281 582 aa17.93■□□□□ 0.46
SQLE-201ENST00000265896 MRPS9P82933 396 aaKnown RBP17.93■□□□□ 0.46
SQLE-201ENST00000265896 SLC15A2Q16348 729 aa17.93■□□□□ 0.46
SQLE-201ENST00000265896 C11orf63Q6NUN7 778 aa17.93■□□□□ 0.46
SQLE-201ENST00000265896 NSMCE1Q8WV22 266 aa17.93■□□□□ 0.46
SQLE-201ENST00000265896 ALG13Q9NP73 1137 aaKnown RBP17.93■□□□□ 0.46
SQLE-201ENST00000265896 SAE1Q9UBE0 346 aaPredicted RBP17.93■□□□□ 0.46
SQLE-201ENST00000265896 ANAPC5Q9UJX4 755 aa17.93■□□□□ 0.46
SQLE-201ENST00000265896 YDJCA8MPS7 323 aa17.93■□□□□ 0.46
SQLE-201ENST00000265896 C21orf2O43822 256 aa17.93■□□□□ 0.46
SQLE-201ENST00000265896 ATF7P17544 494 aaPredicted RBP17.93■□□□□ 0.46
SQLE-201ENST00000265896 ANXA13P27216 316 aa17.93■□□□□ 0.46
SQLE-201ENST00000265896 DNAJC3Q13217 504 aa17.93■□□□□ 0.46
SQLE-201ENST00000265896 DRP2Q13474 957 aa17.93■□□□□ 0.46
SQLE-201ENST00000265896 YY1AP1Q9H869 796 aa17.93■□□□□ 0.46
SQLE-201ENST00000265896 MYBL1P10243 752 aa17.92■□□□□ 0.46
SQLE-201ENST00000265896 PLS3P13797 630 aa17.92■□□□□ 0.46
SQLE-201ENST00000265896 TAS2R40P59535 323 aa17.92■□□□□ 0.46
SQLE-201ENST00000265896 NCALDP61601 193 aa17.92■□□□□ 0.46
SQLE-201ENST00000265896 MTMR1Q13613 665 aa17.92■□□□□ 0.46
SQLE-201ENST00000265896 HELQQ8TDG4 1101 aa17.92■□□□□ 0.46
SQLE-201ENST00000265896 WNT8AQ9H1J5 351 aa17.92■□□□□ 0.46
SQLE-201ENST00000265896 PIK3CDO00329 1044 aa17.92■□□□□ 0.46
SQLE-201ENST00000265896 HNRNPDLO14979 420 aaKnown RBP17.92■□□□□ 0.46
SQLE-201ENST00000265896 DIAPH2O60879 1101 aa17.92■□□□□ 0.46
SQLE-201ENST00000265896 IFNB1P01574 187 aa17.92■□□□□ 0.46
SQLE-201ENST00000265896 YY1P25490 414 aa17.92■□□□□ 0.46
SQLE-201ENST00000265896 PLCB4Q15147 1175 aa17.92■□□□□ 0.46
SQLE-201ENST00000265896 STRIP1Q5VSL9 837 aa17.92■□□□□ 0.46
SQLE-201ENST00000265896 ZNF341Q9BYN7 854 aa17.92■□□□□ 0.46
SQLE-201ENST00000265896 FHDC1Q9C0D6 1143 aaPredicted RBP17.92■□□□□ 0.46
SQLE-201ENST00000265896 SLC24A3Q9HC58 644 aa17.92■□□□□ 0.46
SQLE-201ENST00000265896 SEL1LQ9UBV2 794 aa17.92■□□□□ 0.46
SQLE-201ENST00000265896 NAALADL1Q9UQQ1 740 aa17.92■□□□□ 0.46
SQLE-201ENST00000265896 ATF2P15336 505 aa17.91■□□□□ 0.46
SQLE-201ENST00000265896 PAX7P23759 505 aa17.91■□□□□ 0.46
SQLE-201ENST00000265896 QARSP47897 775 aaKnown RBP17.91■□□□□ 0.46
SQLE-201ENST00000265896 MFAP3P55082 362 aa17.91■□□□□ 0.46
SQLE-201ENST00000265896 LACTB2Q53H82 288 aaPredicted RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms