RNA–Protein interactions for RNA: ENST00000265641.9

CPT1A-201, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPT1A, Length 5,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-201ENST00000265641 LUZP2Q86TE4 346 aa11.29□□□□□ -0.6
CPT1A-201ENST00000265641 LRRC6Q86X45 466 aa11.29□□□□□ -0.6
CPT1A-201ENST00000265641 ZNF398Q8TD17 642 aa11.29□□□□□ -0.6
CPT1A-201ENST00000265641 K7ENM7 598 aa11.29□□□□□ -0.6
CPT1A-201ENST00000265641 CYTH3O43739 400 aa11.29□□□□□ -0.6
CPT1A-201ENST00000265641 BCAMP50895 628 aa11.29□□□□□ -0.6
CPT1A-201ENST00000265641 PABPC4Q13310 644 aaKnown RBP eCLIP11.29□□□□□ -0.66e-11■■■□□ 18.3
CPT1A-201ENST00000265641 TSHZ1Q6ZSZ6 1077 aa11.29□□□□□ -0.6
CPT1A-201ENST00000265641 SGMS1Q86VZ5 419 aa11.29□□□□□ -0.6
CPT1A-201ENST00000265641 LRRN4CLQ8ND94 238 aa11.29□□□□□ -0.6
CPT1A-201ENST00000265641 SH3TC2Q8TF17 1288 aa11.29□□□□□ -0.6
CPT1A-201ENST00000265641 CCDC90BQ9GZT6 254 aa11.29□□□□□ -0.6
CPT1A-201ENST00000265641 CACYBPQ9HB71 228 aaKnown RBP11.29□□□□□ -0.6
CPT1A-201ENST00000265641 HMG20AQ9NP66 347 aa11.29□□□□□ -0.6
CPT1A-201ENST00000265641 PIK3C2BO00750 1634 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 WDR47O94967 919 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 DLGAP3O95886 979 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 TUBA3CQ13748 450 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 TFDP2Q14188 446 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 TTC27Q6P3X3 843 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 PI16Q6UXB8 463 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 OXER1Q8TDS5 423 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 DHX38Q92620 1227 aaKnown RBP11.28□□□□□ -0.6
CPT1A-201ENST00000265641 DGCR14Q96DF8 476 aaKnown RBP11.28□□□□□ -0.6
CPT1A-201ENST00000265641 STRBPQ96SI9 672 aaKnown RBP11.28□□□□□ -0.6
CPT1A-201ENST00000265641 TMED5Q9Y3A6 229 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 KLHL41O60662 606 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 CHN2P52757 468 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 NR1H2P55055 460 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 IL1RL1Q01638 556 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 PPP2R5DQ14738 602 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 SPOPLQ6IQ16 392 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 ST13P5Q8NFI4 369 aaPredicted RBP11.28□□□□□ -0.6
CPT1A-201ENST00000265641 ANKS1AQ92625 1134 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 KCNB2Q92953 911 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 MS4A14Q96JA4 679 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 ZC3H12CQ9C0D7 883 aaKnown RBP11.28□□□□□ -0.6
CPT1A-201ENST00000265641 RPAP3Q9H6T3 665 aaPredicted RBP11.28□□□□□ -0.6
CPT1A-201ENST00000265641 DBR1Q9UK59 544 aaKnown RBP11.28□□□□□ -0.6
CPT1A-201ENST00000265641 ADGRB1O14514 1584 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 GOLGA8MH3BSY2 632 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 BCL10O95999 233 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 RFC4P35249 363 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 ALDH18A1P54886 795 aaKnown RBP11.28□□□□□ -0.6
CPT1A-201ENST00000265641 BNC1Q01954 994 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 LONRF1Q17RB8 773 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 AASDHQ4L235 1098 aaPredicted RBP11.28□□□□□ -0.6
CPT1A-201ENST00000265641 ODR4Q5SWX8 454 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 BSPRYQ5W0U4 402 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 PLEKHA7Q6IQ23 1121 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 DNAJC24Q6P3W2 148 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 FRMD5Q7Z6J6 570 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 ZNF354CQ86Y25 554 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 TBC1D10CQ8IV04 446 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 STX19Q8N4C7 294 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 MDM1Q8TC05 714 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 CNKSR1Q969H4 720 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 SKA1Q96BD8 255 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 ACCSQ96QU6 501 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 ZBED2Q9BTP6 218 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 MRPL1Q9BYD6 325 aaKnown RBP11.28□□□□□ -0.6
CPT1A-201ENST00000265641 FRMD8Q9BZ67 464 aaPredicted RBP11.28□□□□□ -0.6
CPT1A-201ENST00000265641 IL25Q9H293 177 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 DMTF1Q9Y222 760 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 PRR23AA6NEV1 266 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 POTECB2RU33 542 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 GOLGA8RI6L899 631 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 PIK3R2O00459 728 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 OCRLQ01968 901 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 PDIA2Q13087 525 aaKnown RBP11.28□□□□□ -0.6
CPT1A-201ENST00000265641 SLC29A2Q14542 456 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 OASLQ15646 514 aaKnown RBP11.28□□□□□ -0.6
CPT1A-201ENST00000265641 CYB5R4Q7L1T6 521 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 DNAJC10Q8IXB1 793 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 TAB3Q8N5C8 712 aaPredicted RBP11.28□□□□□ -0.6
CPT1A-201ENST00000265641 LY9Q9HBG7 655 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 WHRNQ9P202 907 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 UVRAGQ9P2Y5 699 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 DNAJC12Q9UKB3 198 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 METP08581 1390 aa11.28□□□□□ -0.6
CPT1A-201ENST00000265641 PSMG1O95456 288 aa11.27□□□□□ -0.6
CPT1A-201ENST00000265641 ABCE1P61221 599 aaKnown RBP11.27□□□□□ -0.6
CPT1A-201ENST00000265641 PRPF39Q86UA1 669 aaKnown RBP11.27□□□□□ -0.6
CPT1A-201ENST00000265641 RBM46Q8TBY0 533 aaKnown RBP11.27□□□□□ -0.6
CPT1A-201ENST00000265641 ZBTB18Q99592 522 aa11.27□□□□□ -0.6
CPT1A-201ENST00000265641 PAIP1Q9H074 479 aaKnown RBP11.27□□□□□ -0.6
CPT1A-201ENST00000265641 SCN3BQ9NY72 215 aa11.27□□□□□ -0.6
CPT1A-201ENST00000265641 A0A087WXM4 84 aa11.27□□□□□ -0.61
CPT1A-201ENST00000265641 KANSL1LA0AUZ9 987 aa11.27□□□□□ -0.61
CPT1A-201ENST00000265641 UNC5CO95185 931 aa11.27□□□□□ -0.61
CPT1A-201ENST00000265641 TUBA1BP68363 451 aa11.27□□□□□ -0.61
CPT1A-201ENST00000265641 ATP2C1P98194 919 aaPredicted RBP11.27□□□□□ -0.61
CPT1A-201ENST00000265641 ITGB3BPQ13352 177 aaPredicted RBP11.27□□□□□ -0.61
CPT1A-201ENST00000265641 TUBA1AQ71U36 451 aa11.27□□□□□ -0.61
CPT1A-201ENST00000265641 SEPT1Q8WYJ6 367 aa11.27□□□□□ -0.61
CPT1A-201ENST00000265641 BORCS5Q969J3 196 aa11.27□□□□□ -0.61
CPT1A-201ENST00000265641 LRRC39Q96DD0 335 aa11.27□□□□□ -0.61
CPT1A-201ENST00000265641 MPP6Q9NZW5 540 aa11.27□□□□□ -0.61
CPT1A-201ENST00000265641 PREX1Q8TCU6 1659 aa11.27□□□□□ -0.61
CPT1A-201ENST00000265641 LRRC7Q96NW7 1537 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms