RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 ZCWPW2Q504Y3 356 aa9.34□□□□□ -0.91
VAPB-201ENST00000265619 MFSD5Q6N075 450 aa9.34□□□□□ -0.91
VAPB-201ENST00000265619 FBXO33Q7Z6M2 555 aa9.34□□□□□ -0.91
VAPB-201ENST00000265619 SAPCD2Q86UD0 394 aa9.34□□□□□ -0.91
VAPB-201ENST00000265619 CCDC84Q86UT8 332 aaPredicted RBP9.34□□□□□ -0.91
VAPB-201ENST00000265619 CLEC10AQ8IUN9 316 aa9.34□□□□□ -0.91
VAPB-201ENST00000265619 ENAHQ8N8S7 591 aaPredicted RBP9.34□□□□□ -0.91
VAPB-201ENST00000265619 C10orf82Q8WW14 230 aa9.34□□□□□ -0.91
VAPB-201ENST00000265619 MAGEB18Q96M61 343 aa9.34□□□□□ -0.91
VAPB-201ENST00000265619 SIKE1Q9BRV8 207 aa9.34□□□□□ -0.91
VAPB-201ENST00000265619 CPVLQ9H3G5 476 aa9.34□□□□□ -0.91
VAPB-201ENST00000265619 CHORDC1Q9UHD1 332 aaPredicted RBP9.34□□□□□ -0.91
VAPB-201ENST00000265619 SH3GLB1Q9Y371 365 aa9.34□□□□□ -0.91
VAPB-201ENST00000265619 MYOCOSA0A1B0GUC4 107 aa9.34□□□□□ -0.91
VAPB-201ENST00000265619 MAP3K7O43318 606 aa9.34□□□□□ -0.91
VAPB-201ENST00000265619 PRPF3O43395 683 aaKnown RBP9.34□□□□□ -0.91
VAPB-201ENST00000265619 PEX14O75381 377 aa9.34□□□□□ -0.91
VAPB-201ENST00000265619 NAT1P18440 290 aa9.34□□□□□ -0.91
VAPB-201ENST00000265619 PTPN4P29074 926 aa9.34□□□□□ -0.91
VAPB-201ENST00000265619 MLH1P40692 756 aa9.34□□□□□ -0.91
VAPB-201ENST00000265619 NLRP5P59047 1200 aa9.34□□□□□ -0.91
VAPB-201ENST00000265619 IGBP1P78318 339 aa9.34□□□□□ -0.91
VAPB-201ENST00000265619 CTTNQ14247 550 aaKnown RBP9.34□□□□□ -0.91
VAPB-201ENST00000265619 INF2Q27J81 1249 aa9.34□□□□□ -0.91
VAPB-201ENST00000265619 RAPH1Q70E73 1250 aa9.34□□□□□ -0.91
VAPB-201ENST00000265619 SLFN11Q7Z7L1 901 aa9.34□□□□□ -0.91
VAPB-201ENST00000265619 MAP7D3Q8IWC1 876 aa9.34□□□□□ -0.91
VAPB-201ENST00000265619 CXorf38Q8TB03 319 aa9.34□□□□□ -0.91
VAPB-201ENST00000265619 CLPTM1LQ96KA5 538 aa9.34□□□□□ -0.91
VAPB-201ENST00000265619 NAP1L3Q99457 506 aaPredicted RBP9.34□□□□□ -0.91
VAPB-201ENST00000265619 CNOT7Q9UIV1 285 aaKnown RBP9.34□□□□□ -0.91
VAPB-201ENST00000265619 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.34□□□□□ -0.91
VAPB-201ENST00000265619 GSC2O15499 205 aa9.34□□□□□ -0.91
VAPB-201ENST00000265619 NDUFB5O43674 189 aa9.34□□□□□ -0.91
VAPB-201ENST00000265619 EYA4O95677 639 aa9.34□□□□□ -0.91
VAPB-201ENST00000265619 BMP15O95972 392 aa9.34□□□□□ -0.91
VAPB-201ENST00000265619 PABPC4LP0CB38 370 aaKnown RBP9.34□□□□□ -0.91
VAPB-201ENST00000265619 CDR2Q01850 454 aa9.34□□□□□ -0.91
VAPB-201ENST00000265619 MAPK7Q13164 816 aa9.34□□□□□ -0.91
VAPB-201ENST00000265619 AOC3Q16853 763 aa9.34□□□□□ -0.91
VAPB-201ENST00000265619 ZNF568Q3ZCX4 644 aa9.34□□□□□ -0.91
VAPB-201ENST00000265619 SPDYCQ5MJ68 293 aa9.34□□□□□ -0.91
VAPB-201ENST00000265619 IFIT1BQ5T764 474 aaKnown RBP9.34□□□□□ -0.91
VAPB-201ENST00000265619 ALKBH5Q6P6C2 394 aaKnown RBP9.34□□□□□ -0.91
VAPB-201ENST00000265619 GJB7Q6PEY0 223 aa9.34□□□□□ -0.91
VAPB-201ENST00000265619 STKLD1Q8NE28 680 aa9.34□□□□□ -0.91
VAPB-201ENST00000265619 TMEM109Q9BVC6 243 aa9.34□□□□□ -0.91
VAPB-201ENST00000265619 USP29Q9HBJ7 922 aa9.34□□□□□ -0.91
VAPB-201ENST00000265619 CNTNAP5Q8WYK1 1306 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 ASMTLO95671 621 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 SLC9A1P19634 815 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 BAG6P46379 1132 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 CPA2P48052 419 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 RXRGP48443 463 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 SULT2A1Q06520 285 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 OVGP1Q12889 678 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 SLC15A2Q16348 729 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 TMEM266Q2M3C6 531 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 KLHL35Q6PF15 583 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 RNF168Q8IYW5 571 aaPredicted RBP9.33□□□□□ -0.92
VAPB-201ENST00000265619 SLC25A41Q8N5S1 370 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 C17orf50Q8WW18 174 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 GAB3Q8WWW8 586 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 GANQ9H2C0 597 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 C12orf65Q9H3J6 166 aaKnown RBP9.33□□□□□ -0.92
VAPB-201ENST00000265619 UBN1Q9NPG3 1134 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 WDR37Q9Y2I8 494 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 STK24Q9Y6E0 443 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 USP17L3A6NCW0 530 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 USP17L4A6NCW7 530 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 MYMKA6NI61 221 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 OPHN1O60890 802 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 RAD17O75943 681 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 GOLGA8HP0CJ92 632 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 GTF2H1P32780 548 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 CA8P35219 290 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 PRKCIP41743 596 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 RASSF2P50749 326 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 ARFIP2P53365 341 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 CDC16Q13042 620 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 MTMR2Q13614 643 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 ASIC2Q16515 512 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 KYNUQ16719 465 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 DPY19L2P1Q6NXN4 242 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 TMEM53Q6P2H8 277 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 DTHD1Q6ZMT9 781 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 TRIM67Q6ZTA4 783 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 USP17L1Q7RTZ2 530 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 PDCD7Q8N8D1 485 aaKnown RBP9.33□□□□□ -0.92
VAPB-201ENST00000265619 PRELID2Q8N945 189 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 RFWD2Q8NHY2 731 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 FBXO41Q8TF61 875 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 CENPKQ9BS16 269 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 AIPL1Q9NZN9 384 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 STX18Q9P2W9 335 aaKnown RBP9.33□□□□□ -0.92
VAPB-201ENST00000265619 DCTN4Q9UJW0 460 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 PPM1HQ9ULR3 514 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 PAIP2BQ9ULR5 123 aaKnown RBP9.33□□□□□ -0.92
VAPB-201ENST00000265619 BAZ2AQ9UIF9 1905 aaKnown RBP9.33□□□□□ -0.92
VAPB-201ENST00000265619 UMODL1Q5DID0 1318 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms