RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 PCDHGA3Q9Y5H0 932 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 CABIN1Q9Y6J0 2220 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 XDHP47989 1333 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 A0A1B0GTH6 734 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 ZBED1O96006 694 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 SMARCA1P28370 1054 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 TCP10Q12799 353 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 BYSLQ13895 437 aaKnown RBP6.02□□□□□ -1.45
VCAN-201ENST00000265077 GSTA3Q16772 222 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 ABCB5Q2M3G0 1257 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 PDCD4Q53EL6 469 aaKnown RBP6.02□□□□□ -1.45
VCAN-201ENST00000265077 KSR1Q8IVT5 923 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 TBCKQ8TEA7 893 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 OSBP2Q969R2 916 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 RNPEPL1Q9HAU8 725 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 POLD4Q9HCU8 107 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 CROTQ9UKG9 612 aa6.02□□□□□ -1.45
VCAN-201ENST00000265077 DLGAP5Q15398 846 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 ZNF394Q53GI3 561 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 PASD1Q8IV76 773 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 CCDC103Q8IW40 242 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 FAM25AB3EWG3 89 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 FAM25CB3EWG5 89 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 FAM25GB3EWG6 89 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 LARGE1O95461 756 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 PAMP19021 973 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 KRT20P35900 424 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 TUFMP49411 452 aaKnown RBP6.01□□□□□ -1.45
VCAN-201ENST00000265077 RIPK1Q13546 671 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 LARGE2Q8N3Y3 721 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 DCAF4Q8WV16 495 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 EEF2KMTQ96G04 330 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 MLXIPQ9HAP2 919 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 SLC38A10Q9HBR0 1119 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 SLC12A6Q9UHW9 1150 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 TRIP11Q15643 1979 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 DPPA5A6NC42 116 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 GSTA4O15217 222 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 DTNBO60941 627 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 WBP4O75554 376 aaKnown RBP6.01□□□□□ -1.45
VCAN-201ENST00000265077 ZNF24P17028 368 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 PMLP29590 882 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 IFRD2Q12894 506 aaPredicted RBP6.01□□□□□ -1.45
VCAN-201ENST00000265077 PPP1R18Q6NYC8 613 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 DARS2Q6PI48 645 aaKnown RBP6.01□□□□□ -1.45
VCAN-201ENST00000265077 CEP19Q96LK0 163 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 GCOM2Q9BZD3 368 aaPredicted RBP6.01□□□□□ -1.45
VCAN-201ENST00000265077 RASA4BC9J798 803 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 BIRC5O15392 142 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 RASA4O43374 803 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 PRCPP42785 496 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 PFKFB3Q16875 520 aaPredicted RBP6.01□□□□□ -1.45
VCAN-201ENST00000265077 RABGAP1LQ5R372 815 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 RNF207Q6ZRF8 634 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 CATSPER3Q86XQ3 398 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 NIM1KQ8IY84 436 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 ELOA2Q8IYF1 753 aaPredicted RBP6.01□□□□□ -1.45
VCAN-201ENST00000265077 CAPSLQ8WWF8 208 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 PPP2R3CQ969Q6 453 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 VPS39Q96JC1 886 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 DACH2Q96NX9 599 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 WDR17Q8IZU2 1322 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 DIDO1Q9BTC0 2240 aaKnown RBP6.01□□□□□ -1.45
VCAN-201ENST00000265077 ESYT3A0FGR9 886 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 HSPA13P48723 471 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 PLEKHA7Q6IQ23 1121 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 POLR3CQ9BUI4 534 aaPredicted RBP6.01□□□□□ -1.45
VCAN-201ENST00000265077 NUP85Q9BW27 656 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 KLC2Q9H0B6 622 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 PLGRKTQ9HBL7 147 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 CTNNAL1Q9UBT7 734 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 SNX12Q9UMY4 172 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 WDR91A4D1P6 747 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 ALAS1P13196 640 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 USP46P62068 366 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 BBS9Q3SYG4 887 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 TTC39CQ8N584 583 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 MRPL1Q9BYD6 325 aaKnown RBP6.01□□□□□ -1.45
VCAN-201ENST00000265077 SERPINB13Q9UIV8 391 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 CASZ1Q86V15 1759 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 CFAP69A5D8W1 941 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 CNOT3O75175 753 aaKnown RBP6.01□□□□□ -1.45
VCAN-201ENST00000265077 PEX14O75381 377 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 FOSL1P15407 271 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 DHX34Q14147 1143 aaKnown RBP6.01□□□□□ -1.45
VCAN-201ENST00000265077 PTPN21Q16825 1174 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 VPS37AQ8NEZ2 397 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 CCDC134Q9H6E4 229 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 GGT7Q9UJ14 662 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 TYW5A2RUC4 315 aaKnown RBP6.01□□□□□ -1.45
VCAN-201ENST00000265077 TAC1P20366 129 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 PSMA2P25787 234 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 KCNV1Q6PIU1 500 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 CDR2LQ86X02 465 aaPredicted RBP6.01□□□□□ -1.45
VCAN-201ENST00000265077 ARL8AQ96BM9 186 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 SNF8Q96H20 258 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 FOXP3Q9BZS1 431 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 SEPT9Q9UHD8 586 aaPredicted RBP6.01□□□□□ -1.45
VCAN-201ENST00000265077 ANAPC7Q9UJX3 599 aa6.01□□□□□ -1.45
VCAN-201ENST00000265077 USP32Q8NFA0 1604 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms