RNA–Protein interactions for RNA: ENST00000264187.6

NID1-201, Transcript of nidogen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID1, Length 5,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-201ENST00000264187 SNRNP27Q8WVK2 155 aaKnown RBP15.9■□□□□ 0.14
NID1-201ENST00000264187 GEMIN8Q9NWZ8 242 aaKnown RBP15.9■□□□□ 0.14
NID1-201ENST00000264187 NEDD4P46934 1319 aa15.9■□□□□ 0.14
NID1-201ENST00000264187 EMSYQ7Z589 1322 aa15.9■□□□□ 0.14
NID1-201ENST00000264187 UBTFL6P0CB48 400 aaPredicted RBP15.9■□□□□ 0.14
NID1-201ENST00000264187 RUNX1T1Q06455 604 aa15.9■□□□□ 0.14
NID1-201ENST00000264187 PCSK7Q16549 785 aa15.9■□□□□ 0.14
NID1-201ENST00000264187 RBAKQ9NYW8 714 aaPredicted RBP15.9■□□□□ 0.14
NID1-201ENST00000264187 MAPKBP1O60336 1514 aa15.9■□□□□ 0.14
NID1-201ENST00000264187 ANO9A1A5B4 782 aa15.9■□□□□ 0.14
NID1-201ENST00000264187 CFAP73A6NFT4 308 aa15.9■□□□□ 0.14
NID1-201ENST00000264187 CYP26A1O43174 497 aa15.9■□□□□ 0.14
NID1-201ENST00000264187 SASH1O94885 1247 aa15.9■□□□□ 0.14
NID1-201ENST00000264187 HIST1H2AGP0C0S8 130 aaPredicted RBP15.9■□□□□ 0.14
NID1-201ENST00000264187 EPB42P16452 691 aa15.9■□□□□ 0.14
NID1-201ENST00000264187 HIST1H2ADP20671 130 aa15.9■□□□□ 0.14
NID1-201ENST00000264187 TBXAS1P24557 533 aaPredicted RBP15.9■□□□□ 0.14
NID1-201ENST00000264187 GRIK1P39086 918 aa15.9■□□□□ 0.14
NID1-201ENST00000264187 RGS7P49802 495 aa15.9■□□□□ 0.14
NID1-201ENST00000264187 NLRP11P59045 1033 aaKnown RBP15.9■□□□□ 0.14
NID1-201ENST00000264187 SLC30A5Q8TAD4 765 aa15.9■□□□□ 0.14
NID1-201ENST00000264187 HIST1H2AHQ96KK5 128 aa15.9■□□□□ 0.14
NID1-201ENST00000264187 HIST1H2AJQ99878 128 aa15.9■□□□□ 0.14
NID1-201ENST00000264187 H2AFJQ9BTM1 129 aa15.9■□□□□ 0.14
NID1-201ENST00000264187 THTPAQ9BU02 230 aa15.9■□□□□ 0.14
NID1-201ENST00000264187 ZC3H4Q9UPT8 1303 aaKnown RBP15.9■□□□□ 0.14
NID1-201ENST00000264187 TMEM179Q6ZVK1 233 aa15.89■□□□□ 0.14
NID1-201ENST00000264187 WNT8AQ9H1J5 351 aa15.89■□□□□ 0.14
NID1-201ENST00000264187 PCMTD2Q9NV79 361 aa15.89■□□□□ 0.14
NID1-201ENST00000264187 DDX56Q9NY93 547 aaKnown RBP15.89■□□□□ 0.14
NID1-201ENST00000264187 KCNA3P22001 575 aa15.89■□□□□ 0.13
NID1-201ENST00000264187 SULT1E1P49888 294 aa15.89■□□□□ 0.13
NID1-201ENST00000264187 TMEM154Q6P9G4 183 aa15.89■□□□□ 0.13
NID1-201ENST00000264187 NLRP10Q86W26 655 aa15.89■□□□□ 0.13
NID1-201ENST00000264187 TRIM51Q9BSJ1 452 aa15.89■□□□□ 0.13
NID1-201ENST00000264187 PLEKHA5Q9HAU0 1116 aa15.89■□□□□ 0.13
NID1-201ENST00000264187 PHF20L1A8MW92 1017 aa15.89■□□□□ 0.13
NID1-201ENST00000264187 SOAT1P35610 550 aa15.89■□□□□ 0.13
NID1-201ENST00000264187 LIFRP42702 1097 aa15.89■□□□□ 0.13
NID1-201ENST00000264187 TPI1P60174 286 aa15.89■□□□□ 0.13
NID1-201ENST00000264187 KLF6Q99612 283 aaPredicted RBP15.89■□□□□ 0.13
NID1-201ENST00000264187 RAD18Q9NS91 495 aa15.89■□□□□ 0.13
NID1-201ENST00000264187 LIMA1Q9UHB6 759 aaKnown RBP15.89■□□□□ 0.13
NID1-201ENST00000264187 IL6STP40189 918 aaPredicted RBP15.89■□□□□ 0.13
NID1-201ENST00000264187 CLK1P49759 484 aaKnown RBP15.89■□□□□ 0.13
NID1-201ENST00000264187 PLOD1Q02809 727 aaPredicted RBP15.89■□□□□ 0.13
NID1-201ENST00000264187 AP3B2Q13367 1082 aa15.89■□□□□ 0.13
NID1-201ENST00000264187 EFHBQ8N7U6 833 aa15.89■□□□□ 0.13
NID1-201ENST00000264187 RIN3Q8TB24 985 aa15.89■□□□□ 0.13
NID1-201ENST00000264187 LRRC1Q9BTT6 524 aa15.89■□□□□ 0.13
NID1-201ENST00000264187 TSSK1BQ9BXA7 367 aa15.89■□□□□ 0.13
NID1-201ENST00000264187 TDRD3Q9H7E2 651 aaKnown RBP15.89■□□□□ 0.13
NID1-201ENST00000264187 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.89■□□□□ 0.13
NID1-201ENST00000264187 LOC102724159A0A0B4J2E5 919 aa15.89■□□□□ 0.13
NID1-201ENST00000264187 SNAP23O00161 211 aa15.89■□□□□ 0.13
NID1-201ENST00000264187 C21orf2O43822 256 aa15.89■□□□□ 0.13
NID1-201ENST00000264187 FCER1AP12319 257 aa15.89■□□□□ 0.13
NID1-201ENST00000264187 CHN1P15882 459 aa15.89■□□□□ 0.13
NID1-201ENST00000264187 PWP2Q15269 919 aaKnown RBP15.89■□□□□ 0.13
NID1-201ENST00000264187 P3H1Q32P28 736 aa15.89■□□□□ 0.13
NID1-201ENST00000264187 KHDRBS2Q5VWX1 349 aaKnown RBP15.89■□□□□ 0.13
NID1-201ENST00000264187 KIF2BQ8N4N8 673 aa15.89■□□□□ 0.13
NID1-201ENST00000264187 FAM167AQ96KS9 214 aa15.89■□□□□ 0.13
NID1-201ENST00000264187 SH2D3AQ9BRG2 576 aa15.89■□□□□ 0.13
NID1-201ENST00000264187 C17orf80Q9BSJ5 609 aa15.89■□□□□ 0.13
NID1-201ENST00000264187 MRPL1Q9BYD6 325 aaKnown RBP15.89■□□□□ 0.13
NID1-201ENST00000264187 PKP3Q9Y446 797 aa15.89■□□□□ 0.13
NID1-201ENST00000264187 USP10Q14694 798 aaKnown RBP15.88■□□□□ 0.13
NID1-201ENST00000264187 RAB42Q8N4Z0 105 aa15.88■□□□□ 0.13
NID1-201ENST00000264187 DIS3LQ8TF46 1054 aaKnown RBP15.88■□□□□ 0.13
NID1-201ENST00000264187 RNPC3Q96LT9 517 aaKnown RBP15.88■□□□□ 0.13
NID1-201ENST00000264187 TMEM47Q9BQJ4 181 aa15.88■□□□□ 0.13
NID1-201ENST00000264187 TASP1Q9H6P5 420 aa15.88■□□□□ 0.13
NID1-201ENST00000264187 RNF123Q5XPI4 1314 aa15.88■□□□□ 0.13
NID1-201ENST00000264187 M0R3G1 203 aa15.88■□□□□ 0.13
NID1-201ENST00000264187 ARL4DP49703 201 aa15.88■□□□□ 0.13
NID1-201ENST00000264187 MTF1Q14872 753 aa15.88■□□□□ 0.13
NID1-201ENST00000264187 IL31Q6EBC2 164 aa15.88■□□□□ 0.13
NID1-201ENST00000264187 TBC1D10CQ8IV04 446 aa15.88■□□□□ 0.13
NID1-201ENST00000264187 PRPF18Q99633 342 aaKnown RBP15.88■□□□□ 0.13
NID1-201ENST00000264187 QTRT2Q9H974 415 aaKnown RBP15.88■□□□□ 0.13
NID1-201ENST00000264187 PNMA3Q9UL41 463 aa15.88■□□□□ 0.13
NID1-201ENST00000264187 BLMP54132 1417 aaPredicted RBP15.88■□□□□ 0.13
NID1-201ENST00000264187 TMED10P49755 219 aaKnown RBP15.88■□□□□ 0.13
NID1-201ENST00000264187 ABCE1P61221 599 aaKnown RBP15.88■□□□□ 0.13
NID1-201ENST00000264187 TRIP10Q15642 601 aa15.88■□□□□ 0.13
NID1-201ENST00000264187 PGBD3Q8N328 593 aa15.88■□□□□ 0.13
NID1-201ENST00000264187 SNX31Q8N9S9 440 aa15.88■□□□□ 0.13
NID1-201ENST00000264187 NPHP3-ACAD11A0A0J9YXS1 232 aa15.88■□□□□ 0.13
NID1-201ENST00000264187 CYTH3O43739 400 aa15.88■□□□□ 0.13
NID1-201ENST00000264187 PTPN12Q05209 780 aaKnown RBP15.88■□□□□ 0.13
NID1-201ENST00000264187 PROM2Q8N271 834 aa15.88■□□□□ 0.13
NID1-201ENST00000264187 C9orf72Q96LT7 481 aa15.88■□□□□ 0.13
NID1-201ENST00000264187 WRNIP1Q96S55 665 aa15.88■□□□□ 0.13
NID1-201ENST00000264187 DMAP1Q9NPF5 467 aaPredicted RBP15.88■□□□□ 0.13
NID1-201ENST00000264187 PARVAQ9NVD7 372 aa15.88■□□□□ 0.13
NID1-201ENST00000264187 FAM187AA6NFU0 413 aa15.88■□□□□ 0.13
NID1-201ENST00000264187 CAND2O75155 1236 aa15.88■□□□□ 0.13
NID1-201ENST00000264187 CYB5R4Q7L1T6 521 aa15.88■□□□□ 0.13
NID1-201ENST00000264187 FOXP4Q8IVH2 680 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms