RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 CNOT7Q9UIV1 285 aaKnown RBP17.29■□□□□ 0.36
GPC1-201ENST00000264039 DIS3Q9Y2L1 958 aaKnown RBP17.29■□□□□ 0.36
GPC1-201ENST00000264039 ZWINTO95229 277 aa17.29■□□□□ 0.36
GPC1-201ENST00000264039 RPA3P35244 121 aaPredicted RBP17.29■□□□□ 0.36
GPC1-201ENST00000264039 USP46P62068 366 aa17.29■□□□□ 0.36
GPC1-201ENST00000264039 PSMC6P62333 389 aa17.29■□□□□ 0.36
GPC1-201ENST00000264039 AP2B1P63010 937 aa17.29■□□□□ 0.36
GPC1-201ENST00000264039 TMPRSS15P98073 1019 aa17.29■□□□□ 0.36
GPC1-201ENST00000264039 EMC10Q5UCC4 262 aa17.29■□□□□ 0.36
GPC1-201ENST00000264039 EIF1ADQ8N9N8 165 aaKnown RBP17.29■□□□□ 0.36
GPC1-201ENST00000264039 ADAM7Q9H2U9 754 aa17.29■□□□□ 0.36
GPC1-201ENST00000264039 TMEM59LQ9UK28 342 aa17.29■□□□□ 0.36
GPC1-201ENST00000264039 TAC1P20366 129 aa17.28■□□□□ 0.36
GPC1-201ENST00000264039 ASPHQ12797 758 aa17.28■□□□□ 0.36
GPC1-201ENST00000264039 ECM1Q16610 540 aa17.28■□□□□ 0.36
GPC1-201ENST00000264039 ARL10Q8N8L6 244 aa17.28■□□□□ 0.36
GPC1-201ENST00000264039 HES6Q96HZ4 224 aa17.28■□□□□ 0.36
GPC1-201ENST00000264039 NSL1Q96IY1 281 aa17.28■□□□□ 0.36
GPC1-201ENST00000264039 CLMNQ96JQ2 1002 aa17.28■□□□□ 0.36
GPC1-201ENST00000264039 ZNF512BQ96KM6 892 aaPredicted RBP17.28■□□□□ 0.36
GPC1-201ENST00000264039 ZNF184Q99676 751 aaPredicted RBP17.28■□□□□ 0.36
GPC1-201ENST00000264039 IL17RBQ9NRM6 502 aa17.28■□□□□ 0.36
GPC1-201ENST00000264039 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.28■□□□□ 0.36
GPC1-201ENST00000264039 RBAK-RBAKDNI3L0D1 243 aa17.28■□□□□ 0.36
GPC1-201ENST00000264039 TJP3O95049 919 aa17.28■□□□□ 0.36
GPC1-201ENST00000264039 STAMBPO95630 424 aa17.28■□□□□ 0.36
GPC1-201ENST00000264039 ZDHHC24Q6UX98 284 aa17.28■□□□□ 0.36
GPC1-201ENST00000264039 CCDC89Q8N998 374 aa17.28■□□□□ 0.36
GPC1-201ENST00000264039 PYROXD1Q8WU10 500 aa17.28■□□□□ 0.36
GPC1-201ENST00000264039 ANKFY1Q9P2R3 1169 aa17.28■□□□□ 0.36
GPC1-201ENST00000264039 LOC100653049A0A140TA62 436 aa17.28■□□□□ 0.36
GPC1-201ENST00000264039 KRT34O76011 436 aa17.28■□□□□ 0.36
GPC1-201ENST00000264039 CYP11B2P19099 503 aa17.28■□□□□ 0.36
GPC1-201ENST00000264039 HOXA13P31271 388 aaPredicted RBP17.28■□□□□ 0.36
GPC1-201ENST00000264039 BFSP1Q12934 665 aa17.28■□□□□ 0.36
GPC1-201ENST00000264039 FRMD5Q7Z6J6 570 aa17.28■□□□□ 0.36
GPC1-201ENST00000264039 ASAP3Q8TDY4 903 aa17.28■□□□□ 0.36
GPC1-201ENST00000264039 TSSK1BQ9BXA7 367 aa17.28■□□□□ 0.36
GPC1-201ENST00000264039 IFT122Q9HBG6 1241 aa17.28■□□□□ 0.36
GPC1-201ENST00000264039 ADRA1DP25100 572 aa17.27■□□□□ 0.36
GPC1-201ENST00000264039 CYTH1Q15438 398 aa17.27■□□□□ 0.36
GPC1-201ENST00000264039 VGLL2Q8N8G2 317 aa17.27■□□□□ 0.36
GPC1-201ENST00000264039 DRAXINQ8NBI3 349 aaPredicted RBP17.27■□□□□ 0.36
GPC1-201ENST00000264039 CLPTM1LQ96KA5 538 aa17.27■□□□□ 0.36
GPC1-201ENST00000264039 KCNQ5Q9NR82 932 aa17.27■□□□□ 0.36
GPC1-201ENST00000264039 K7ENM7 598 aa17.27■□□□□ 0.35
GPC1-201ENST00000264039 LIN7AO14910 233 aaPredicted RBP17.27■□□□□ 0.35
GPC1-201ENST00000264039 CALCAP01258 141 aa17.27■□□□□ 0.35
GPC1-201ENST00000264039 RFC4P35249 363 aa17.27■□□□□ 0.35
GPC1-201ENST00000264039 COG2Q14746 738 aa17.27■□□□□ 0.35
GPC1-201ENST00000264039 KCTD21Q4G0X4 260 aa17.27■□□□□ 0.35
GPC1-201ENST00000264039 IYDQ6PHW0 289 aa17.27■□□□□ 0.35
GPC1-201ENST00000264039 VSTM1Q6UX27 236 aa17.27■□□□□ 0.35
GPC1-201ENST00000264039 DPH6Q7L8W6 267 aa17.27■□□□□ 0.35
GPC1-201ENST00000264039 ARHGAP18Q8N392 663 aa17.27■□□□□ 0.35
GPC1-201ENST00000264039 NSUN4Q96CB9 384 aaKnown RBP17.27■□□□□ 0.35
GPC1-201ENST00000264039 NINJ2Q9NZG7 142 aa17.27■□□□□ 0.35
GPC1-201ENST00000264039 AJAP1Q9UKB5 411 aaPredicted RBP17.27■□□□□ 0.35
GPC1-201ENST00000264039 A6NJR5 290 aa17.26■□□□□ 0.35
GPC1-201ENST00000264039 C6orf229H3BNL8 230 aa17.26■□□□□ 0.35
GPC1-201ENST00000264039 FMO5P49326 533 aa17.26■□□□□ 0.35
GPC1-201ENST00000264039 DSG1Q02413 1049 aa17.26■□□□□ 0.35
GPC1-201ENST00000264039 TRIM28Q13263 835 aaKnown RBP17.26■□□□□ 0.35
GPC1-201ENST00000264039 LRRC6Q86X45 466 aa17.26■□□□□ 0.35
GPC1-201ENST00000264039 ACSF2Q96CM8 615 aaPredicted RBP17.26■□□□□ 0.35
GPC1-201ENST00000264039 DTNBP1Q96EV8 351 aa17.26■□□□□ 0.35
GPC1-201ENST00000264039 FAM84BQ96KN1 310 aaPredicted RBP17.26■□□□□ 0.35
GPC1-201ENST00000264039 FAM210AQ96ND0 272 aa17.26■□□□□ 0.35
GPC1-201ENST00000264039 STK33Q9BYT3 514 aa17.26■□□□□ 0.35
GPC1-201ENST00000264039 BCAS3Q9H6U6 928 aa17.26■□□□□ 0.35
GPC1-201ENST00000264039 ZDHHC18Q9NUE0 388 aa17.26■□□□□ 0.35
GPC1-201ENST00000264039 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.26■□□□□ 0.35
GPC1-201ENST00000264039 SPECC1L-ADORA2AF8WAN1 911 aa17.26■□□□□ 0.35
GPC1-201ENST00000264039 PSMG1O95456 288 aa17.26■□□□□ 0.35
GPC1-201ENST00000264039 NPTXRO95502 500 aa17.26■□□□□ 0.35
GPC1-201ENST00000264039 CDK8P49336 464 aa17.26■□□□□ 0.35
GPC1-201ENST00000264039 STAT4Q14765 748 aa17.26■□□□□ 0.35
GPC1-201ENST00000264039 PHF12Q96QT6 1004 aa17.26■□□□□ 0.35
GPC1-201ENST00000264039 RUSC1Q9BVN2 902 aa17.26■□□□□ 0.35
GPC1-201ENST00000264039 TRAIPQ9BWF2 469 aa17.26■□□□□ 0.35
GPC1-201ENST00000264039 PCMTD2Q9NV79 361 aa17.26■□□□□ 0.35
GPC1-201ENST00000264039 ARHGEF35A5YM69 484 aa17.26■□□□□ 0.35
GPC1-201ENST00000264039 A6NHS1 94 aa17.26■□□□□ 0.35
GPC1-201ENST00000264039 CFLARO15519 480 aa17.26■□□□□ 0.35
GPC1-201ENST00000264039 CFBP00751 764 aa17.26■□□□□ 0.35
GPC1-201ENST00000264039 INHBAP08476 426 aa17.26■□□□□ 0.35
GPC1-201ENST00000264039 ITIH2P19823 946 aa17.26■□□□□ 0.35
GPC1-201ENST00000264039 NEK3P51956 506 aa17.26■□□□□ 0.35
GPC1-201ENST00000264039 ACAP1Q15027 740 aa17.26■□□□□ 0.35
GPC1-201ENST00000264039 WASHC2DQ5SRD0 308 aa17.26■□□□□ 0.35
GPC1-201ENST00000264039 PPP4R3CPQ6ZMV5 832 aa17.26■□□□□ 0.35
GPC1-201ENST00000264039 LZTS1Q9Y250 596 aa17.26■□□□□ 0.35
GPC1-201ENST00000264039 ZNF652Q9Y2D9 606 aa17.26■□□□□ 0.35
GPC1-201ENST00000264039 NEU2Q9Y3R4 380 aa17.26■□□□□ 0.35
GPC1-201ENST00000264039 EMSYQ7Z589 1322 aa17.26■□□□□ 0.35
GPC1-201ENST00000264039 TOM1L1O75674 476 aa17.25■□□□□ 0.35
GPC1-201ENST00000264039 HARSP12081 509 aaKnown RBP17.25■□□□□ 0.35
GPC1-201ENST00000264039 NCF2P19878 526 aaPredicted RBP17.25■□□□□ 0.35
GPC1-201ENST00000264039 INHBEP58166 350 aa17.25■□□□□ 0.35
GPC1-201ENST00000264039 BASP1P80723 227 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms