RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 RNASELQ05823 741 aaKnown RBP19.98■□□□□ 0.79
SDF4-201ENST00000263741 SLC10A6Q3KNW5 377 aa19.98■□□□□ 0.79
SDF4-201ENST00000263741 KLHL10Q6JEL2 608 aa19.98■□□□□ 0.79
SDF4-201ENST00000263741 CRELD2Q6UXH1 353 aaPredicted RBP19.98■□□□□ 0.79
SDF4-201ENST00000263741 GUF1Q8N442 669 aaKnown RBP19.98■□□□□ 0.79
SDF4-201ENST00000263741 HSPBP1Q9NZL4 362 aa19.98■□□□□ 0.79
SDF4-201ENST00000263741 CPSF3Q9UKF6 684 aaKnown RBP19.98■□□□□ 0.79
SDF4-201ENST00000263741 MYO7AQ13402 2215 aa19.97■□□□□ 0.79
SDF4-201ENST00000263741 ZC3H11AO75152 810 aaKnown RBP eCLIP19.97■□□□□ 0.792e-6■□□□□ 8.9
SDF4-201ENST00000263741 DDHD2O94830 711 aa19.97■□□□□ 0.79
SDF4-201ENST00000263741 GARTP22102 1010 aa19.97■□□□□ 0.79
SDF4-201ENST00000263741 YARSP54577 528 aaKnown RBP19.97■□□□□ 0.79
SDF4-201ENST00000263741 CAVIN1Q6NZI2 390 aaKnown RBP19.97■□□□□ 0.79
SDF4-201ENST00000263741 Q7L0L9 218 aa19.97■□□□□ 0.79
SDF4-201ENST00000263741 RABGGTAQ92696 567 aa19.97■□□□□ 0.79
SDF4-201ENST00000263741 FAM84AQ96KN4 292 aa19.97■□□□□ 0.79
SDF4-201ENST00000263741 ZMAT2Q96NC0 199 aaKnown RBP19.97■□□□□ 0.79
SDF4-201ENST00000263741 SEMA6BQ9H3T3 888 aa19.97■□□□□ 0.79
SDF4-201ENST00000263741 UBN1Q9NPG3 1134 aa19.97■□□□□ 0.79
SDF4-201ENST00000263741 TRIM49BA6NDI0 452 aa19.96■□□□□ 0.79
SDF4-201ENST00000263741 EPOPA6NHQ4 379 aa19.96■□□□□ 0.79
SDF4-201ENST00000263741 CLTAP09496 248 aa19.96■□□□□ 0.79
SDF4-201ENST00000263741 PMS1P54277 932 aaKnown RBP19.96■□□□□ 0.79
SDF4-201ENST00000263741 CBWD2Q8IUF1 395 aa19.96■□□□□ 0.79
SDF4-201ENST00000263741 ARNTL2Q8WYA1 636 aa19.96■□□□□ 0.79
SDF4-201ENST00000263741 EEF2KMTQ96G04 330 aa19.96■□□□□ 0.79
SDF4-201ENST00000263741 CSPG5O95196 566 aa19.96■□□□□ 0.79
SDF4-201ENST00000263741 CTNNB1P35222 781 aa19.96■□□□□ 0.79
SDF4-201ENST00000263741 CCDC173Q0VFZ6 552 aa19.96■□□□□ 0.79
SDF4-201ENST00000263741 ADSSL1Q8N142 457 aa19.96■□□□□ 0.79
SDF4-201ENST00000263741 RDH13Q8NBN7 331 aa19.96■□□□□ 0.79
SDF4-201ENST00000263741 MRPL9Q9BYD2 267 aaKnown RBP19.96■□□□□ 0.79
SDF4-201ENST00000263741 ZNF576Q9H609 170 aa19.96■□□□□ 0.79
SDF4-201ENST00000263741 NRDE2Q9H7Z3 1164 aa19.96■□□□□ 0.79
SDF4-201ENST00000263741 GOLGA2P5Q9HBQ8 144 aa19.96■□□□□ 0.79
SDF4-201ENST00000263741 TOPORSQ9NS56 1045 aaPredicted RBP19.96■□□□□ 0.79
SDF4-201ENST00000263741 NT5C1B-RDH14C9J2C7 533 aa19.95■□□□□ 0.78
SDF4-201ENST00000263741 F8W810 466 aa19.95■□□□□ 0.78
SDF4-201ENST00000263741 INPPL1O15357 1258 aa19.95■□□□□ 0.78
SDF4-201ENST00000263741 GPD1LQ8N335 351 aa19.95■□□□□ 0.78
SDF4-201ENST00000263741 RPF1Q9H9Y2 349 aaKnown RBP19.95■□□□□ 0.78
SDF4-201ENST00000263741 CTNND2Q9UQB3 1225 aa19.95■□□□□ 0.78
SDF4-201ENST00000263741 REV3LO60673 3130 aa19.95■□□□□ 0.78
SDF4-201ENST00000263741 LACTBL1A8MY62 500 aa19.95■□□□□ 0.78
SDF4-201ENST00000263741 RFXAPO00287 272 aa19.95■□□□□ 0.78
SDF4-201ENST00000263741 NR3C1P04150 777 aa19.95■□□□□ 0.78
SDF4-201ENST00000263741 ADRB2P07550 413 aa19.95■□□□□ 0.78
SDF4-201ENST00000263741 ZCWPW2Q504Y3 356 aa19.95■□□□□ 0.78
SDF4-201ENST00000263741 CCDC183Q5T5S1 534 aa19.95■□□□□ 0.78
SDF4-201ENST00000263741 ALKAL1Q6UXT8 129 aa19.95■□□□□ 0.78
SDF4-201ENST00000263741 TMEM173Q86WV6 379 aaPredicted RBP19.95■□□□□ 0.78
SDF4-201ENST00000263741 GAS2L3Q86XJ1 694 aa19.95■□□□□ 0.78
SDF4-201ENST00000263741 C18orf25Q96B23 403 aaPredicted RBP19.95■□□□□ 0.78
SDF4-201ENST00000263741 TGS1Q96RS0 853 aaKnown RBP19.95■□□□□ 0.78
SDF4-201ENST00000263741 PAAF1Q9BRP4 392 aa19.95■□□□□ 0.78
SDF4-201ENST00000263741 EYSQ5T1H1 3165 aa19.94■□□□□ 0.78
SDF4-201ENST00000263741 SMIM28A0A1B0GU29 152 aa19.94■□□□□ 0.78
SDF4-201ENST00000263741 TTC26A0AVF1 554 aa19.94■□□□□ 0.78
SDF4-201ENST00000263741 CASTOR2A6NHX0 329 aa19.94■□□□□ 0.78
SDF4-201ENST00000263741 PPP1R3GB7ZBB8 358 aa19.94■□□□□ 0.78
SDF4-201ENST00000263741 PDXKO00764 312 aa19.94■□□□□ 0.78
SDF4-201ENST00000263741 EXTL3O43909 919 aa19.94■□□□□ 0.78
SDF4-201ENST00000263741 ZNF445P59923 1031 aa19.94■□□□□ 0.78
SDF4-201ENST00000263741 PPP2R3AQ06190 1150 aa19.94■□□□□ 0.78
SDF4-201ENST00000263741 GRIK3Q13003 919 aa19.94■□□□□ 0.78
SDF4-201ENST00000263741 DPCR1Q3MIW9 517 aa19.94■□□□□ 0.78
SDF4-201ENST00000263741 COLGALT1Q8NBJ5 622 aa19.94■□□□□ 0.78
SDF4-201ENST00000263741 CLP1Q92989 425 aaKnown RBP19.94■□□□□ 0.78
SDF4-201ENST00000263741 RBAKQ9NYW8 714 aaPredicted RBP19.94■□□□□ 0.78
SDF4-201ENST00000263741 CNTN3Q9P232 1028 aa19.94■□□□□ 0.78
SDF4-201ENST00000263741 SCN1AP35498 2009 aa19.94■□□□□ 0.78
SDF4-201ENST00000263741 KIF20AO95235 890 aa19.93■□□□□ 0.78
SDF4-201ENST00000263741 NFICP08651 508 aa19.93■□□□□ 0.78
SDF4-201ENST00000263741 CASP4P49662 377 aa19.93■□□□□ 0.78
SDF4-201ENST00000263741 GUCY2FP51841 1108 aa19.93■□□□□ 0.78
SDF4-201ENST00000263741 BCAR1P56945 870 aa19.93■□□□□ 0.78
SDF4-201ENST00000263741 SOX4Q06945 474 aaPredicted RBP19.93■□□□□ 0.78
SDF4-201ENST00000263741 NAB2Q15742 525 aa19.93■□□□□ 0.78
SDF4-201ENST00000263741 EPC2Q52LR7 807 aa19.93■□□□□ 0.78
SDF4-201ENST00000263741 ZNF697Q5TEC3 545 aa19.93■□□□□ 0.78
SDF4-201ENST00000263741 GDPD5Q8WTR4 605 aa19.93■□□□□ 0.78
SDF4-201ENST00000263741 FAM193BQ96PV7 902 aaPredicted RBP19.93■□□□□ 0.78
SDF4-201ENST00000263741 TUBGCP4Q9UGJ1 667 aa19.93■□□□□ 0.78
SDF4-201ENST00000263741 PRG3Q9Y2Y8 225 aaPredicted RBP19.93■□□□□ 0.78
SDF4-201ENST00000263741 THP07101 528 aa19.93■□□□□ 0.78
SDF4-201ENST00000263741 SLC11A1P49279 550 aa19.93■□□□□ 0.78
SDF4-201ENST00000263741 STX17P56962 302 aa19.93■□□□□ 0.78
SDF4-201ENST00000263741 ERVK-21P61565 698 aa19.93■□□□□ 0.78
SDF4-201ENST00000263741 JADE1Q6IE81 842 aa19.93■□□□□ 0.78
SDF4-201ENST00000263741 TRIML1Q8N9V2 468 aa19.93■□□□□ 0.78
SDF4-201ENST00000263741 XXYLT1Q8NBI6 393 aa19.93■□□□□ 0.78
SDF4-201ENST00000263741 PPP1R10Q96QC0 940 aaKnown RBP19.93■□□□□ 0.78
SDF4-201ENST00000263741 TRAF3IP3Q9Y228 551 aa19.93■□□□□ 0.78
SDF4-201ENST00000263741 CALUO43852 315 aaPredicted RBP19.92■□□□□ 0.78
SDF4-201ENST00000263741 EXOC3O60645 756 aa19.92■□□□□ 0.78
SDF4-201ENST00000263741 NR2F2P24468 414 aa19.92■□□□□ 0.78
SDF4-201ENST00000263741 DSC1Q08554 894 aa19.92■□□□□ 0.78
SDF4-201ENST00000263741 GRIN2CQ14957 1233 aa19.92■□□□□ 0.78
SDF4-201ENST00000263741 SNRNP35Q16560 246 aaKnown RBP19.92■□□□□ 0.78
SDF4-201ENST00000263741 COBLL1Q53SF7 1204 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms