RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 MAPK13O15264 365 aa10.57□□□□□ -0.72
SNRNP40-201ENST00000263694 CAND2O75155 1236 aa10.57□□□□□ -0.72
SNRNP40-201ENST00000263694 AFPP02771 609 aaKnown RBP10.57□□□□□ -0.72
SNRNP40-201ENST00000263694 CLTBP09497 229 aa10.57□□□□□ -0.72
SNRNP40-201ENST00000263694 AKAP5P24588 427 aa10.57□□□□□ -0.72
SNRNP40-201ENST00000263694 AXLP30530 894 aa10.57□□□□□ -0.72
SNRNP40-201ENST00000263694 PBX1P40424 430 aa10.57□□□□□ -0.72
SNRNP40-201ENST00000263694 RBL2Q08999 1139 aa10.57□□□□□ -0.72
SNRNP40-201ENST00000263694 GOLGA8FQ08AF8 430 aa10.57□□□□□ -0.72
SNRNP40-201ENST00000263694 GOLGA8DPQ0D2H9 430 aa10.57□□□□□ -0.72
SNRNP40-201ENST00000263694 KCNMA1Q12791 1236 aa10.57□□□□□ -0.72
SNRNP40-201ENST00000263694 PCBP1Q15365 356 aaKnown RBP eCLIP10.57□□□□□ -0.72
SNRNP40-201ENST00000263694 CBWD6Q4V339 395 aa10.57□□□□□ -0.72
SNRNP40-201ENST00000263694 CBWD3Q5JTY5 395 aa10.57□□□□□ -0.72
SNRNP40-201ENST00000263694 CBWD5Q5RIA9 395 aa10.57□□□□□ -0.72
SNRNP40-201ENST00000263694 TMC6Q7Z403 805 aa10.57□□□□□ -0.72
SNRNP40-201ENST00000263694 UBE2Q1Q7Z7E8 422 aa10.57□□□□□ -0.72
SNRNP40-201ENST00000263694 RTN4RL1Q86UN2 441 aaPredicted RBP10.57□□□□□ -0.72
SNRNP40-201ENST00000263694 SMG8Q8ND04 991 aaKnown RBP10.57□□□□□ -0.72
SNRNP40-201ENST00000263694 TRIM43Q96BQ3 446 aaPredicted RBP10.57□□□□□ -0.72
SNRNP40-201ENST00000263694 KIAA1586Q9HCI6 787 aa10.57□□□□□ -0.72
SNRNP40-201ENST00000263694 PRDM5Q9NQX1 630 aaPredicted RBP10.57□□□□□ -0.72
SNRNP40-201ENST00000263694 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.57□□□□□ -0.721e-7■■■■■ 50.3
SNRNP40-201ENST00000263694 KLK14Q9P0G3 267 aa10.57□□□□□ -0.72
SNRNP40-201ENST00000263694 TBX21Q9UL17 535 aa10.57□□□□□ -0.72
SNRNP40-201ENST00000263694 TPM2P07951 284 aa10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 CLTAP09496 248 aa10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 TNNI1P19237 187 aa10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 DEKP35659 375 aaKnown RBP10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 FMO5P49326 533 aa10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 DSC3Q14574 896 aa10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 PSMD6Q15008 389 aa10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 SYCP1Q15431 976 aa10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 SLC10A6Q3KNW5 377 aa10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 DCAF4L1Q3SXM0 396 aa10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 DEFB128Q7Z7B8 93 aa10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 VSTM4Q8IW00 320 aa10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 BRSK2Q8IWQ3 736 aa10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 DBF4BQ8NFT6 615 aa10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 OR5B17Q8NGF7 314 aa10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 TMC2Q8TDI7 906 aa10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 ANP32BQ92688 251 aaKnown RBP10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 LPPQ93052 612 aa10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 ADAM2Q99965 735 aa10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 IFIH1Q9BYX4 1025 aaKnown RBP10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 TRIM6Q9C030 488 aaPredicted RBP10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 RPF1Q9H9Y2 349 aaKnown RBP10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 PARP2Q9UGN5 583 aa10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 IPPQ9Y573 584 aa10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 PCDHB2Q9Y5E7 798 aa10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 TANC1Q9C0D5 1861 aa10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 ACTN1P12814 892 aa10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 ZSCAN20P17040 1043 aaPredicted RBP10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 SLC9A1P19634 815 aa10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 GRM5P41594 1212 aa10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 FKBP15Q5T1M5 1219 aa10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 EFCAB13Q8IY85 973 aa10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 RNF169Q8NCN4 708 aa10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 CPLX3Q8WVH0 158 aa10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 LINC01599Q8WXQ3 324 aa10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 PDLIM2Q96JY6 352 aa10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 ACAP3Q96P50 834 aa10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 FNBP1Q96RU3 617 aa10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 TMEM117Q9H0C3 514 aa10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 CHST12Q9NRB3 414 aa10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 FAM105AQ9NUU6 356 aa10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 SIK3Q9Y2K2 1263 aa10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 SQORQ9Y6N5 450 aa10.56□□□□□ -0.72
SNRNP40-201ENST00000263694 TTC26A0AVF1 554 aa10.55□□□□□ -0.72
SNRNP40-201ENST00000263694 RNF225M0QZC1 329 aaPredicted RBP10.55□□□□□ -0.72
SNRNP40-201ENST00000263694 EPHB6O15197 1021 aa10.55□□□□□ -0.72
SNRNP40-201ENST00000263694 RECQL4O94761 1208 aa10.55□□□□□ -0.72
SNRNP40-201ENST00000263694 TPM3P06753 285 aa10.55□□□□□ -0.72
SNRNP40-201ENST00000263694 NFICP08651 508 aa10.55□□□□□ -0.72
SNRNP40-201ENST00000263694 CDC25BP30305 580 aa10.55□□□□□ -0.72
SNRNP40-201ENST00000263694 GUCY2FP51841 1108 aa10.55□□□□□ -0.72
SNRNP40-201ENST00000263694 MCCD1P59942 119 aaPredicted RBP10.55□□□□□ -0.72
SNRNP40-201ENST00000263694 TFAMQ00059 246 aaKnown RBP10.55□□□□□ -0.72
SNRNP40-201ENST00000263694 ARID5BQ14865 1188 aa10.55□□□□□ -0.72
SNRNP40-201ENST00000263694 GLRA4Q5JXX5 417 aa10.55□□□□□ -0.72
SNRNP40-201ENST00000263694 JADE1Q6IE81 842 aa10.55□□□□□ -0.72
SNRNP40-201ENST00000263694 USP38Q8NB14 1042 aa10.55□□□□□ -0.72
SNRNP40-201ENST00000263694 SEMA4DQ92854 862 aa10.55□□□□□ -0.72
SNRNP40-201ENST00000263694 VWCEQ96DN2 955 aa10.55□□□□□ -0.72
SNRNP40-201ENST00000263694 PCMTD1Q96MG8 357 aaPredicted RBP10.55□□□□□ -0.72
SNRNP40-201ENST00000263694 CGRRF1Q99675 332 aa10.55□□□□□ -0.72
SNRNP40-201ENST00000263694 CCDC94Q9BW85 323 aaPredicted RBP10.55□□□□□ -0.72
SNRNP40-201ENST00000263694 C4BPAP04003 597 aaKnown RBP10.54□□□□□ -0.72
SNRNP40-201ENST00000263694 ATF7P17544 494 aaPredicted RBP10.54□□□□□ -0.72
SNRNP40-201ENST00000263694 AFF1P51825 1210 aaKnown RBP10.54□□□□□ -0.72
SNRNP40-201ENST00000263694 CLDN10P78369 228 aa10.54□□□□□ -0.72
SNRNP40-201ENST00000263694 MYL7Q01449 175 aa10.54□□□□□ -0.72
SNRNP40-201ENST00000263694 PPP2R3AQ06190 1150 aa10.54□□□□□ -0.72
SNRNP40-201ENST00000263694 LRMPQ12912 555 aa10.54□□□□□ -0.72
SNRNP40-201ENST00000263694 PLEKHG4Q58EX7 1191 aa10.54□□□□□ -0.72
SNRNP40-201ENST00000263694 TDRD10Q5VZ19 366 aaKnown RBP10.54□□□□□ -0.72
SNRNP40-201ENST00000263694 DPY19L2P1Q6NXN4 242 aa10.54□□□□□ -0.72
SNRNP40-201ENST00000263694 GJB7Q6PEY0 223 aa10.54□□□□□ -0.72
SNRNP40-201ENST00000263694 SV2AQ7L0J3 742 aa10.54□□□□□ -0.72
SNRNP40-201ENST00000263694 APBB1IPQ7Z5R6 666 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms