RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 CHST7Q9NS84 486 aa17.24■□□□□ 0.35
PDZRN3-201ENST00000263666 SEL1LQ9UBV2 794 aa17.24■□□□□ 0.35
PDZRN3-201ENST00000263666 GAKO14976 1311 aa17.24■□□□□ 0.35
PDZRN3-201ENST00000263666 MAP3K6O95382 1288 aa17.24■□□□□ 0.35
PDZRN3-201ENST00000263666 LCA5LO95447 670 aa17.24■□□□□ 0.35
PDZRN3-201ENST00000263666 SMTNL2Q2TAL5 461 aa17.24■□□□□ 0.35
PDZRN3-201ENST00000263666 SLC17A8Q8NDX2 589 aa17.24■□□□□ 0.35
PDZRN3-201ENST00000263666 SGSM3Q96HU1 749 aa17.24■□□□□ 0.35
PDZRN3-201ENST00000263666 TAAR1Q96RJ0 339 aa17.24■□□□□ 0.35
PDZRN3-201ENST00000263666 DNAJC18Q9H819 358 aa17.24■□□□□ 0.35
PDZRN3-201ENST00000263666 C10orf88Q9H8K7 445 aa17.24■□□□□ 0.35
PDZRN3-201ENST00000263666 COG5Q9UP83 839 aa17.24■□□□□ 0.35
PDZRN3-201ENST00000263666 IVNS1ABPQ9Y6Y0 642 aa17.24■□□□□ 0.35
PDZRN3-201ENST00000263666 IGF2BP3O00425 579 aaKnown RBP eCLIP17.24■□□□□ 0.35
PDZRN3-201ENST00000263666 SHOX2O60902 331 aaPredicted RBP17.24■□□□□ 0.35
PDZRN3-201ENST00000263666 P3H1Q32P28 736 aa17.24■□□□□ 0.35
PDZRN3-201ENST00000263666 FYB2Q5VWT5 728 aa17.24■□□□□ 0.35
PDZRN3-201ENST00000263666 CASC4Q6P4E1 433 aa17.24■□□□□ 0.35
PDZRN3-201ENST00000263666 SCYL3Q8IZE3 742 aa17.24■□□□□ 0.35
PDZRN3-201ENST00000263666 ANKRD35Q8N283 1001 aa17.24■□□□□ 0.35
PDZRN3-201ENST00000263666 SNED1Q8TER0 1413 aa17.24■□□□□ 0.35
PDZRN3-201ENST00000263666 CICQ96RK0 1608 aaPredicted RBP17.24■□□□□ 0.35
PDZRN3-201ENST00000263666 MTFR1LQ9H019 292 aa17.24■□□□□ 0.35
PDZRN3-201ENST00000263666 WNT8AQ9H1J5 351 aa17.24■□□□□ 0.35
PDZRN3-201ENST00000263666 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.24■□□□□ 0.35
PDZRN3-201ENST00000263666 MYBL1P10243 752 aa17.23■□□□□ 0.35
PDZRN3-201ENST00000263666 CREB1P16220 341 aa17.23■□□□□ 0.35
PDZRN3-201ENST00000263666 GABPAQ06546 454 aa17.23■□□□□ 0.35
PDZRN3-201ENST00000263666 ARHGEF18Q6ZSZ5 1173 aa17.23■□□□□ 0.35
PDZRN3-201ENST00000263666 PRCCQ92733 491 aaPredicted RBP17.23■□□□□ 0.35
PDZRN3-201ENST00000263666 P2RX7Q99572 595 aaKnown RBP17.23■□□□□ 0.35
PDZRN3-201ENST00000263666 FZD1Q9UP38 647 aa17.23■□□□□ 0.35
PDZRN3-201ENST00000263666 PDHA1P08559 390 aa17.23■□□□□ 0.35
PDZRN3-201ENST00000263666 MKRN3Q13064 507 aaKnown RBP17.23■□□□□ 0.35
PDZRN3-201ENST00000263666 ANKRD20A8PQ5CZ79 823 aa17.23■□□□□ 0.35
PDZRN3-201ENST00000263666 DNAJC24Q6P3W2 148 aa17.23■□□□□ 0.35
PDZRN3-201ENST00000263666 CDAN1Q8IWY9 1227 aa17.23■□□□□ 0.35
PDZRN3-201ENST00000263666 PRELID2Q8N945 189 aa17.23■□□□□ 0.35
PDZRN3-201ENST00000263666 TPX2Q9ULW0 747 aaKnown RBP17.23■□□□□ 0.35
PDZRN3-201ENST00000263666 NUP98P52948 1817 aa17.23■□□□□ 0.35
PDZRN3-201ENST00000263666 ORC1Q13415 861 aa17.23■□□□□ 0.35
PDZRN3-201ENST00000263666 CLUL1Q15846 466 aa17.23■□□□□ 0.35
PDZRN3-201ENST00000263666 ANKRD20A3Q5VUR7 823 aa17.23■□□□□ 0.35
PDZRN3-201ENST00000263666 ARMC9Q7Z3E5 817 aa17.23■□□□□ 0.35
PDZRN3-201ENST00000263666 FAM163AQ96GL9 167 aaPredicted RBP17.23■□□□□ 0.35
PDZRN3-201ENST00000263666 RBM15Q96T37 977 aaKnown RBP eCLIP17.23■□□□□ 0.35
PDZRN3-201ENST00000263666 TJP1Q07157 1748 aa17.23■□□□□ 0.35
PDZRN3-201ENST00000263666 K7ERI5 159 aa17.23■□□□□ 0.35
PDZRN3-201ENST00000263666 C1orf186Q6ZWK4 172 aa17.23■□□□□ 0.35
PDZRN3-201ENST00000263666 TTC16Q8NEE8 873 aa17.23■□□□□ 0.35
PDZRN3-201ENST00000263666 IL31RAQ8NI17 732 aa17.23■□□□□ 0.35
PDZRN3-201ENST00000263666 PIK3R5Q8WYR1 880 aa17.23■□□□□ 0.35
PDZRN3-201ENST00000263666 MSTO1Q9BUK6 570 aa17.23■□□□□ 0.35
PDZRN3-201ENST00000263666 PARP4Q9UKK3 1724 aaKnown RBP17.22■□□□□ 0.35
PDZRN3-201ENST00000263666 PPP2R5AQ15172 486 aa17.22■□□□□ 0.35
PDZRN3-201ENST00000263666 LRRC57Q8N9N7 239 aa17.22■□□□□ 0.35
PDZRN3-201ENST00000263666 ZC3H4Q9UPT8 1303 aaKnown RBP17.22■□□□□ 0.35
PDZRN3-201ENST00000263666 GNA15P30679 374 aa17.22■□□□□ 0.35
PDZRN3-201ENST00000263666 BAATQ14032 418 aaPredicted RBP17.22■□□□□ 0.35
PDZRN3-201ENST00000263666 MCF2L2Q86YR7 1114 aa17.22■□□□□ 0.35
PDZRN3-201ENST00000263666 TTC17Q96AE7 1141 aa17.22■□□□□ 0.35
PDZRN3-201ENST00000263666 FAM129AQ9BZQ8 928 aa17.22■□□□□ 0.35
PDZRN3-201ENST00000263666 NOD2Q9HC29 1040 aa17.22■□□□□ 0.35
PDZRN3-201ENST00000263666 LRRC4CQ9HCJ2 640 aa17.22■□□□□ 0.35
PDZRN3-201ENST00000263666 ZNF70Q9UC06 446 aaPredicted RBP17.22■□□□□ 0.35
PDZRN3-201ENST00000263666 ANKRD63C9JTQ0 380 aa17.22■□□□□ 0.35
PDZRN3-201ENST00000263666 CYP11B1P15538 503 aa17.22■□□□□ 0.35
PDZRN3-201ENST00000263666 ARSEP51690 589 aa17.22■□□□□ 0.35
PDZRN3-201ENST00000263666 NOP14P78316 857 aaKnown RBP17.22■□□□□ 0.35
PDZRN3-201ENST00000263666 PDIA2Q13087 525 aaKnown RBP17.22■□□□□ 0.35
PDZRN3-201ENST00000263666 SPATA21Q7Z572 469 aa17.22■□□□□ 0.35
PDZRN3-201ENST00000263666 NCAPG2Q86XI2 1143 aa17.22■□□□□ 0.35
PDZRN3-201ENST00000263666 HSPH1Q92598 858 aa17.22■□□□□ 0.35
PDZRN3-201ENST00000263666 SNF8Q96H20 258 aa17.22■□□□□ 0.35
PDZRN3-201ENST00000263666 TRIM33Q9UPN9 1127 aa17.22■□□□□ 0.35
PDZRN3-201ENST00000263666 MAD1L1Q9Y6D9 718 aa17.22■□□□□ 0.35
PDZRN3-201ENST00000263666 RBAK-RBAKDNI3L0D1 243 aa17.21■□□□□ 0.35
PDZRN3-201ENST00000263666 DNM1LO00429 736 aa17.21■□□□□ 0.35
PDZRN3-201ENST00000263666 AGTP01019 485 aa17.21■□□□□ 0.35
PDZRN3-201ENST00000263666 HOXD13P35453 343 aa17.21■□□□□ 0.35
PDZRN3-201ENST00000263666 RPS6P62753 249 aaKnown RBP17.21■□□□□ 0.35
PDZRN3-201ENST00000263666 MAIP1Q8WWC4 291 aa17.21■□□□□ 0.35
PDZRN3-201ENST00000263666 RILPQ96NA2 401 aa17.21■□□□□ 0.35
PDZRN3-201ENST00000263666 MXRA8Q9BRK3 442 aa17.21■□□□□ 0.35
PDZRN3-201ENST00000263666 NUP188Q5SRE5 1749 aa17.21■□□□□ 0.35
PDZRN3-201ENST00000263666 TRPM3Q9HCF6 1732 aaPredicted RBP17.21■□□□□ 0.35
PDZRN3-201ENST00000263666 SYNJ2BP-COX16A0A087WUM0 186 aa17.21■□□□□ 0.35
PDZRN3-201ENST00000263666 GMPSP49915 693 aaPredicted RBP17.21■□□□□ 0.35
PDZRN3-201ENST00000263666 OVGP1Q12889 678 aa17.21■□□□□ 0.35
PDZRN3-201ENST00000263666 TAF11Q15544 211 aa17.21■□□□□ 0.35
PDZRN3-201ENST00000263666 OLFML3Q9NRN5 406 aa17.21■□□□□ 0.35
PDZRN3-201ENST00000263666 COX16Q9P0S2 106 aa17.21■□□□□ 0.35
PDZRN3-201ENST00000263666 USP15Q9Y4E8 981 aaPredicted RBP17.21■□□□□ 0.35
PDZRN3-201ENST00000263666 INO80B-WBP1J3KQ70 363 aa17.21■□□□□ 0.35
PDZRN3-201ENST00000263666 EIF3DO15371 548 aaKnown RBP eCLIP17.21■□□□□ 0.35
PDZRN3-201ENST00000263666 PSMC4P43686 418 aa17.21■□□□□ 0.35
PDZRN3-201ENST00000263666 SLC20A2Q08357 652 aa17.21■□□□□ 0.35
PDZRN3-201ENST00000263666 RFX6Q8HWS3 928 aa17.21■□□□□ 0.35
PDZRN3-201ENST00000263666 ERP27Q96DN0 273 aa17.21■□□□□ 0.35
PDZRN3-201ENST00000263666 STAMBPL1Q96FJ0 436 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms