RNA–Protein interactions for RNA: ENST00000263578.9

FOXRED1-201, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene FOXRED1, Length 1,970 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-201ENST00000263578 USP8P40818 1118 aa16.93■□□□□ 0.3
FOXRED1-201ENST00000263578 TNFSF9P41273 254 aa16.93■□□□□ 0.3
FOXRED1-201ENST00000263578 TM4SF4P48230 202 aa16.93■□□□□ 0.3
FOXRED1-201ENST00000263578 FAM187BQ17R55 369 aa16.93■□□□□ 0.3
FOXRED1-201ENST00000263578 ENOSF1Q7L5Y1 443 aa16.93■□□□□ 0.3
FOXRED1-201ENST00000263578 SRGAP1Q7Z6B7 1085 aa16.93■□□□□ 0.3
FOXRED1-201ENST00000263578 HHIPL1Q96JK4 782 aa16.93■□□□□ 0.3
FOXRED1-201ENST00000263578 FDXACB1Q9BRP7 624 aaPredicted RBP16.93■□□□□ 0.3
FOXRED1-201ENST00000263578 PI4K2AQ9BTU6 479 aa16.93■□□□□ 0.3
FOXRED1-201ENST00000263578 PTPRHQ9HD43 1115 aa16.93■□□□□ 0.3
FOXRED1-201ENST00000263578 CA12O43570 354 aa16.92■□□□□ 0.3
FOXRED1-201ENST00000263578 H2AFZP0C0S5 128 aa16.92■□□□□ 0.3
FOXRED1-201ENST00000263578 TNFAIP3P21580 790 aa16.92■□□□□ 0.3
FOXRED1-201ENST00000263578 ERCC6LQ2NKX8 1250 aa16.92■□□□□ 0.3
FOXRED1-201ENST00000263578 WDR44Q5JSH3 913 aa16.92■□□□□ 0.3
FOXRED1-201ENST00000263578 MARCH8Q5T0T0 291 aa16.92■□□□□ 0.3
FOXRED1-201ENST00000263578 H2AFVQ71UI9 128 aa16.92■□□□□ 0.3
FOXRED1-201ENST00000263578 UBXN4Q92575 508 aa16.92■□□□□ 0.3
FOXRED1-201ENST00000263578 LENG1Q96BZ8 264 aaPredicted RBP16.92■□□□□ 0.3
FOXRED1-201ENST00000263578 PPP1R16BQ96T49 567 aa16.92■□□□□ 0.3
FOXRED1-201ENST00000263578 AGPAT1Q99943 283 aa16.92■□□□□ 0.3
FOXRED1-201ENST00000263578 CPSF3Q9UKF6 684 aaKnown RBP16.92■□□□□ 0.3
FOXRED1-201ENST00000263578 TNFSF13BQ9Y275 285 aa16.92■□□□□ 0.3
FOXRED1-201ENST00000263578 RRN3P2A6NIE6 340 aa16.91■□□□□ 0.3
FOXRED1-201ENST00000263578 TMEM88BA6NKF7 163 aa16.91■□□□□ 0.3
FOXRED1-201ENST00000263578 ZEB2O60315 1214 aa16.91■□□□□ 0.3
FOXRED1-201ENST00000263578 VNN1O95497 513 aa16.91■□□□□ 0.3
FOXRED1-201ENST00000263578 IGHA2P01877 340 aa16.91■□□□□ 0.3
FOXRED1-201ENST00000263578 AP3M2P53677 418 aa16.91■□□□□ 0.3
FOXRED1-201ENST00000263578 SURF1Q15526 300 aa16.91■□□□□ 0.3
FOXRED1-201ENST00000263578 WDR49Q8IV35 697 aa16.91■□□□□ 0.3
FOXRED1-201ENST00000263578 SLC20A1Q8WUM9 679 aa16.91■□□□□ 0.3
FOXRED1-201ENST00000263578 TATDN2Q93075 761 aa16.91■□□□□ 0.3
FOXRED1-201ENST00000263578 ZIC5Q96T25 663 aa16.91■□□□□ 0.3
FOXRED1-201ENST00000263578 SEPT11Q9NVA2 429 aaKnown RBP16.91■□□□□ 0.3
FOXRED1-201ENST00000263578 IQCF3P0C7M6 154 aa16.91■□□□□ 0.3
FOXRED1-201ENST00000263578 CPT1AP50416 773 aa16.91■□□□□ 0.3
FOXRED1-201ENST00000263578 CHMP4BP1P59074 171 aa16.91■□□□□ 0.3
FOXRED1-201ENST00000263578 EEF1DP3Q658K8 133 aa16.91■□□□□ 0.3
FOXRED1-201ENST00000263578 PAXIP1Q6ZW49 1069 aaPredicted RBP16.91■□□□□ 0.3
FOXRED1-201ENST00000263578 OR5B17Q8NGF7 314 aa16.91■□□□□ 0.3
FOXRED1-201ENST00000263578 EPS8L1Q8TE68 723 aa16.91■□□□□ 0.3
FOXRED1-201ENST00000263578 LMBR1Q8WVP7 490 aa16.91■□□□□ 0.3
FOXRED1-201ENST00000263578 NLRP7Q8WX94 980 aa16.91■□□□□ 0.3
FOXRED1-201ENST00000263578 GOLGA1Q92805 767 aa16.91■□□□□ 0.3
FOXRED1-201ENST00000263578 CDT1Q9H211 546 aa16.91■□□□□ 0.3
FOXRED1-201ENST00000263578 PCDHGC5Q9Y5F6 944 aa16.91■□□□□ 0.3
FOXRED1-201ENST00000263578 KIF3CO14782 793 aa16.9■□□□□ 0.3
FOXRED1-201ENST00000263578 CYP26A1O43174 497 aa16.9■□□□□ 0.3
FOXRED1-201ENST00000263578 CTGFP29279 349 aa16.9■□□□□ 0.3
FOXRED1-201ENST00000263578 RBM10P98175 930 aaKnown RBP16.9■□□□□ 0.3
FOXRED1-201ENST00000263578 IFI16Q16666 785 aaKnown RBP16.9■□□□□ 0.3
FOXRED1-201ENST00000263578 AMHR2Q16671 573 aa16.9■□□□□ 0.3
FOXRED1-201ENST00000263578 DNAAF5Q86Y56 855 aa16.9■□□□□ 0.3
FOXRED1-201ENST00000263578 ELMO3Q96BJ8 720 aa16.9■□□□□ 0.3
FOXRED1-201ENST00000263578 SCLT1Q96NL6 688 aa16.9■□□□□ 0.3
FOXRED1-201ENST00000263578 AP5M1Q9H0R1 490 aa16.9■□□□□ 0.3
FOXRED1-201ENST00000263578 SETD4Q9NVD3 440 aa16.9■□□□□ 0.3
FOXRED1-201ENST00000263578 PUF60Q9UHX1 559 aaKnown RBP16.9■□□□□ 0.3
FOXRED1-201ENST00000263578 NOCTQ9UK39 431 aaKnown RBP16.9■□□□□ 0.3
FOXRED1-201ENST00000263578 SNX12Q9UMY4 172 aa16.9■□□□□ 0.3
FOXRED1-201ENST00000263578 Q9Y3F1 56 aa16.9■□□□□ 0.3
FOXRED1-201ENST00000263578 NRCAMQ92823 1304 aa16.9■□□□□ 0.3
FOXRED1-201ENST00000263578 A0A0A6YYK5 440 aaPredicted RBP16.89■□□□□ 0.3
FOXRED1-201ENST00000263578 PALMO75781 387 aa16.89■□□□□ 0.3
FOXRED1-201ENST00000263578 SGPL1O95470 568 aa16.89■□□□□ 0.3
FOXRED1-201ENST00000263578 TFRCP02786 760 aaKnown RBP16.89■□□□□ 0.3
FOXRED1-201ENST00000263578 SMIM10L2AP0DMW4 78 aa16.89■□□□□ 0.3
FOXRED1-201ENST00000263578 SMIM10L2BP0DMW5 78 aa16.89■□□□□ 0.3
FOXRED1-201ENST00000263578 NFRKBQ6P4R8 1299 aa16.89■□□□□ 0.3
FOXRED1-201ENST00000263578 RSRC2Q7L4I2 434 aaKnown RBP16.89■□□□□ 0.3
FOXRED1-201ENST00000263578 ZNF410Q86VK4 478 aa16.89■□□□□ 0.3
FOXRED1-201ENST00000263578 THNSL1Q8IYQ7 743 aa16.89■□□□□ 0.3
FOXRED1-201ENST00000263578 RPUSD2Q8IZ73 545 aaKnown RBP16.89■□□□□ 0.3
FOXRED1-201ENST00000263578 KIAA0319LQ8IZA0 1049 aa16.89■□□□□ 0.3
FOXRED1-201ENST00000263578 DHX38Q92620 1227 aaKnown RBP16.89■□□□□ 0.3
FOXRED1-201ENST00000263578 KAT2BQ92831 832 aa16.89■□□□□ 0.3
FOXRED1-201ENST00000263578 PHACTR2O75167 634 aa16.89■□□□□ 0.29
FOXRED1-201ENST00000263578 PDE6CP51160 858 aa16.89■□□□□ 0.29
FOXRED1-201ENST00000263578 GALCP54803 685 aa16.89■□□□□ 0.29
FOXRED1-201ENST00000263578 FCGRTP55899 365 aa16.89■□□□□ 0.29
FOXRED1-201ENST00000263578 MFSD10Q14728 455 aa16.89■□□□□ 0.29
FOXRED1-201ENST00000263578 TEX35Q5T0J7 233 aa16.89■□□□□ 0.29
FOXRED1-201ENST00000263578 NOP9Q86U38 636 aaKnown RBP16.89■□□□□ 0.29
FOXRED1-201ENST00000263578 SLC47A2Q86VL8 602 aa16.89■□□□□ 0.29
FOXRED1-201ENST00000263578 CDR2LQ86X02 465 aaPredicted RBP16.89■□□□□ 0.29
FOXRED1-201ENST00000263578 PALB2Q86YC2 1186 aa16.89■□□□□ 0.29
FOXRED1-201ENST00000263578 FAM212AQ96EL1 285 aa16.89■□□□□ 0.29
FOXRED1-201ENST00000263578 TSKSQ9UJT2 592 aa16.89■□□□□ 0.29
FOXRED1-201ENST00000263578 NCANO14594 1321 aa16.88■□□□□ 0.29
FOXRED1-201ENST00000263578 CTAGE15A4D2H0 777 aa16.88■□□□□ 0.29
FOXRED1-201ENST00000263578 GRID2IPA4D2P6 1211 aa16.88■□□□□ 0.29
FOXRED1-201ENST00000263578 TMCO5BA8MYB1 307 aa16.88■□□□□ 0.29
FOXRED1-201ENST00000263578 SRGAP2O75044 1071 aa16.88■□□□□ 0.29
FOXRED1-201ENST00000263578 CSDE1O75534 798 aaKnown RBP16.88■□□□□ 0.29
FOXRED1-201ENST00000263578 TMEM253P0C7T8 217 aa16.88■□□□□ 0.29
FOXRED1-201ENST00000263578 CTAGE8P0CG41 777 aa16.88■□□□□ 0.29
FOXRED1-201ENST00000263578 MCF2P10911 925 aa16.88■□□□□ 0.29
FOXRED1-201ENST00000263578 KRT5P13647 590 aa16.88■□□□□ 0.29
FOXRED1-201ENST00000263578 NOP14P78316 857 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms