RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 SNX12Q9UMY4 172 aa18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 DNAL1Q4LDG9 190 aa18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 GJC2Q5T442 439 aaPredicted RBP18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 CLEC17AQ6ZS10 378 aa18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 AIPL1Q9NZN9 384 aa18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 AGTP01019 485 aa18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 P4HBP07237 508 aaKnown RBP18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 ZNF211Q13398 564 aaPredicted RBP18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 SLC10A4Q96EP9 437 aa18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 TBC1D4O60343 1298 aa18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 CRKP46108 304 aa18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 TBC1D10CQ8IV04 446 aa18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 MFN1Q8IWA4 741 aa18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 CMTM5Q96DZ9 223 aa18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 POLR3FQ9H1D9 316 aaPredicted RBP18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 PPHLN1Q8NEY8 458 aaKnown RBP18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 TSPAN17Q96FV3 270 aa18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 USP17L15C9J2P7 530 aa18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 USP17L13C9JLJ4 530 aa18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 USP17L11C9JVI0 530 aa18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 USP17L18D6R9N7 530 aa18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 USP17L22D6RA61 530 aa18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 USP17L17D6RBQ6 530 aa18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 USP17L19D6RCP7 530 aa18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 USP17L20D6RJB6 530 aa18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 USP17L24Q0WX57 530 aa18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 KRT72Q14CN4 511 aa18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 USP17L6PQ6QN14 398 aa18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 SEPT3Q9UH03 358 aa18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 PCSK1NQ9UHG2 260 aa18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 SLC16A3O15427 465 aaKnown RBP18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 KCNN4O15554 427 aa18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 PJA2O43164 708 aa18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 PSMD3O43242 534 aa18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 APRTP07741 180 aa18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 SLC9A1P19634 815 aa18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 EIF3EP60228 445 aaKnown RBP18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 KLC1Q07866 573 aa18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 TEX2Q8IWB9 1127 aa18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 TBC1D23Q9NUY8 699 aa18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 ITIH6Q6UXX5 1313 aa18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 PITPNM2Q9BZ72 1349 aa18.41■□□□□ 0.54
NOTCH3-201ENST00000263388 FGFR4P22455 802 aa18.4■□□□□ 0.54
NOTCH3-201ENST00000263388 CDC27P30260 824 aa18.4■□□□□ 0.54
NOTCH3-201ENST00000263388 KCNQ4P56696 695 aa18.4■□□□□ 0.54
NOTCH3-201ENST00000263388 PIGHQ14442 188 aaPredicted RBP18.4■□□□□ 0.54
NOTCH3-201ENST00000263388 ASAP3Q8TDY4 903 aa18.4■□□□□ 0.54
NOTCH3-201ENST00000263388 STK33Q9BYT3 514 aa18.4■□□□□ 0.54
NOTCH3-201ENST00000263388 DHX35Q9H5Z1 703 aaKnown RBP18.4■□□□□ 0.54
NOTCH3-201ENST00000263388 PALLDQ8WX93 1383 aa18.4■□□□□ 0.54
NOTCH3-201ENST00000263388 PSMC5P62195 406 aa18.4■□□□□ 0.54
NOTCH3-201ENST00000263388 MTHFD1LQ6UB35 978 aa18.4■□□□□ 0.54
NOTCH3-201ENST00000263388 FASTKD5Q7L8L6 764 aaKnown RBP18.4■□□□□ 0.54
NOTCH3-201ENST00000263388 TNIP2Q8NFZ5 429 aa18.4■□□□□ 0.54
NOTCH3-201ENST00000263388 SESN1Q9Y6P5 492 aa18.4■□□□□ 0.54
NOTCH3-201ENST00000263388 GUCY1A3Q02108 690 aa18.4■□□□□ 0.54
NOTCH3-201ENST00000263388 C16orf89Q6UX73 402 aa18.4■□□□□ 0.54
NOTCH3-201ENST00000263388 BATF3Q9NR55 127 aa18.4■□□□□ 0.54
NOTCH3-201ENST00000263388 AURKCQ9UQB9 309 aa18.4■□□□□ 0.54
NOTCH3-201ENST00000263388 ATP1A1P05023 1023 aaKnown RBP18.4■□□□□ 0.54
NOTCH3-201ENST00000263388 MYL3P08590 195 aa18.4■□□□□ 0.54
NOTCH3-201ENST00000263388 RANBP1P43487 201 aa18.4■□□□□ 0.54
NOTCH3-201ENST00000263388 SPATA21Q7Z572 469 aa18.4■□□□□ 0.54
NOTCH3-201ENST00000263388 MASTLQ96GX5 879 aa18.4■□□□□ 0.54
NOTCH3-201ENST00000263388 MAD2L2Q9UI95 211 aa18.4■□□□□ 0.54
NOTCH3-201ENST00000263388 PCDHB8Q9UN66 801 aa18.4■□□□□ 0.54
NOTCH3-201ENST00000263388 ASIC4Q96FT7 647 aa18.4■□□□□ 0.54
NOTCH3-201ENST00000263388 FOXP3Q9BZS1 431 aa18.4■□□□□ 0.54
NOTCH3-201ENST00000263388 AGO2Q9UKV8 859 aaKnown RBP18.4■□□□□ 0.54
NOTCH3-201ENST00000263388 MROH7-TTC4A0A0A0MT08 1334 aa18.4■□□□□ 0.54
NOTCH3-201ENST00000263388 ESYT3A0FGR9 886 aa18.4■□□□□ 0.54
NOTCH3-201ENST00000263388 DFFAO00273 331 aa18.4■□□□□ 0.54
NOTCH3-201ENST00000263388 SNAP25P60880 206 aa18.4■□□□□ 0.54
NOTCH3-201ENST00000263388 SLC18A3Q16572 532 aa18.4■□□□□ 0.54
NOTCH3-201ENST00000263388 ZNF746Q6NUN9 644 aaPredicted RBP18.4■□□□□ 0.54
NOTCH3-201ENST00000263388 PRUNE1Q86TP1 453 aa18.4■□□□□ 0.54
NOTCH3-201ENST00000263388 CASP1P29466 404 aa18.4■□□□□ 0.54
NOTCH3-201ENST00000263388 KCNV1Q6PIU1 500 aa18.4■□□□□ 0.54
NOTCH3-201ENST00000263388 TRABDQ9H4I3 376 aa18.4■□□□□ 0.54
NOTCH3-201ENST00000263388 METP08581 1390 aa18.39■□□□□ 0.54
NOTCH3-201ENST00000263388 PHF2O75151 1096 aa18.39■□□□□ 0.54
NOTCH3-201ENST00000263388 SPATA17Q96L03 361 aa18.39■□□□□ 0.54
NOTCH3-201ENST00000263388 KIAA0391O15091 583 aaKnown RBP18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 COPB2P35606 906 aa18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 DAB2IPQ5VWQ8 1189 aa18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 INTS2Q9H0H0 1204 aaKnown RBP18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 SYTL2Q9HCH5 934 aa18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 AMACRQ9UHK6 382 aa18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 FRMPD1Q5SYB0 1578 aa18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 MYH13Q9UKX3 1938 aa18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 MEFVO15553 781 aaPredicted RBP18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 PRR29P0C7W0 189 aa18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 BLVRAP53004 296 aa18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 CCDC15Q0P6D6 951 aa18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 RASGRP2Q7LDG7 609 aa18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 NDFIP2Q9NV92 336 aa18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 ZNF711Q9Y462 761 aa18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 UBA6A0AVT1 1052 aaPredicted RBP18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 FDX1P10109 184 aa18.39■□□□□ 0.53
NOTCH3-201ENST00000263388 DMC1Q14565 340 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms