RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 PLEKHG4Q58EX7 1191 aa29.85■■■□□ 2.37
SMARCD3-201ENST00000262188 MIIPQ5JXC2 388 aa29.85■■■□□ 2.37
SMARCD3-201ENST00000262188 INTS13Q9NVM9 706 aa29.85■■■□□ 2.37
SMARCD3-201ENST00000262188 IPPQ9Y573 584 aa29.85■■■□□ 2.37
SMARCD3-201ENST00000262188 GNA14O95837 355 aa29.84■■■□□ 2.37
SMARCD3-201ENST00000262188 TIMP1P01033 207 aa29.84■■■□□ 2.37
SMARCD3-201ENST00000262188 MARSP56192 900 aaKnown RBP29.84■■■□□ 2.37
SMARCD3-201ENST00000262188 DCAF4L1Q3SXM0 396 aa29.84■■■□□ 2.37
SMARCD3-201ENST00000262188 C1orf220Q5T0J3 134 aa29.84■■■□□ 2.37
SMARCD3-201ENST00000262188 XPO4Q9C0E2 1151 aaKnown RBP29.84■■■□□ 2.37
SMARCD3-201ENST00000262188 PCDHB2Q9Y5E7 798 aa29.84■■■□□ 2.37
SMARCD3-201ENST00000262188 LDHAP00338 332 aaKnown RBP29.84■■■□□ 2.37
SMARCD3-201ENST00000262188 DLATP10515 647 aaKnown RBP29.84■■■□□ 2.37
SMARCD3-201ENST00000262188 CSF2RAP15509 400 aa29.84■■■□□ 2.37
SMARCD3-201ENST00000262188 BFSP1Q12934 665 aa29.84■■■□□ 2.37
SMARCD3-201ENST00000262188 LPPQ93052 612 aa29.84■■■□□ 2.37
SMARCD3-201ENST00000262188 SECISBP2LQ93073 1101 aaKnown RBP29.84■■■□□ 2.37
SMARCD3-201ENST00000262188 MFSD14AQ96MC6 490 aa29.84■■■□□ 2.37
SMARCD3-201ENST00000262188 FAM105AQ9NUU6 356 aa29.84■■■□□ 2.37
SMARCD3-201ENST00000262188 TEX33O43247 280 aa29.83■■■□□ 2.37
SMARCD3-201ENST00000262188 SYN1P17600 705 aa29.83■■■□□ 2.37
SMARCD3-201ENST00000262188 VAMP7P51809 220 aa29.83■■■□□ 2.37
SMARCD3-201ENST00000262188 SLC35C1Q96A29 364 aa29.83■■■□□ 2.37
SMARCD3-201ENST00000262188 TRIM5Q9C035 493 aa29.83■■■□□ 2.37
SMARCD3-201ENST00000262188 CHST12Q9NRB3 414 aa29.83■■■□□ 2.37
SMARCD3-201ENST00000262188 KLK14Q9P0G3 267 aa29.83■■■□□ 2.37
SMARCD3-201ENST00000262188 PTPRJQ12913 1337 aa29.83■■■□□ 2.37
SMARCD3-201ENST00000262188 UBASH3AP57075 661 aa29.83■■■□□ 2.37
SMARCD3-201ENST00000262188 RNF169Q8NCN4 708 aa29.83■■■□□ 2.37
SMARCD3-201ENST00000262188 UTP18Q9Y5J1 556 aaKnown RBP eCLIP29.83■■■□□ 2.37
SMARCD3-201ENST00000262188 LRRIQ3A6PVS8 624 aaPredicted RBP29.82■■■□□ 2.36
SMARCD3-201ENST00000262188 KIAA0391O15091 583 aaKnown RBP29.82■■■□□ 2.36
SMARCD3-201ENST00000262188 KRT13P13646 458 aa29.82■■■□□ 2.36
SMARCD3-201ENST00000262188 GRM5P41594 1212 aa29.82■■■□□ 2.36
SMARCD3-201ENST00000262188 BRSK2Q8IWQ3 736 aa29.82■■■□□ 2.36
SMARCD3-201ENST00000262188 PARD3BQ8TEW8 1205 aa29.82■■■□□ 2.36
SMARCD3-201ENST00000262188 KIAA1586Q9HCI6 787 aa29.82■■■□□ 2.36
SMARCD3-201ENST00000262188 CTIFO43310 598 aaKnown RBP29.81■■■□□ 2.36
SMARCD3-201ENST00000262188 MAN2A1Q16706 1144 aa29.81■■■□□ 2.36
SMARCD3-201ENST00000262188 SLC10A6Q3KNW5 377 aa29.81■■■□□ 2.36
SMARCD3-201ENST00000262188 INTS8Q75QN2 995 aaKnown RBP29.81■■■□□ 2.36
SMARCD3-201ENST00000262188 METTL14Q9HCE5 456 aaKnown RBP29.81■■■□□ 2.36
SMARCD3-201ENST00000262188 LRRC10BA6NIK2 292 aa29.81■■■□□ 2.36
SMARCD3-201ENST00000262188 RECQL4O94761 1208 aa29.81■■■□□ 2.36
SMARCD3-201ENST00000262188 CXCL10P02778 98 aa29.81■■■□□ 2.36
SMARCD3-201ENST00000262188 CLTAP09496 248 aa29.81■■■□□ 2.36
SMARCD3-201ENST00000262188 PPP3CAQ08209 521 aa29.81■■■□□ 2.36
SMARCD3-201ENST00000262188 KCNH2Q12809 1159 aa29.81■■■□□ 2.36
SMARCD3-201ENST00000262188 VWA3BQ502W6 1294 aa29.81■■■□□ 2.36
SMARCD3-201ENST00000262188 SCARA3Q6AZY7 606 aa29.81■■■□□ 2.36
SMARCD3-201ENST00000262188 ANKRD20A12PQ8NF67 263 aa29.81■■■□□ 2.36
SMARCD3-201ENST00000262188 CCDC51Q96ER9 411 aa29.81■■■□□ 2.36
SMARCD3-201ENST00000262188 ACAP3Q96P50 834 aa29.81■■■□□ 2.36
SMARCD3-201ENST00000262188 RPF1Q9H9Y2 349 aaKnown RBP29.81■■■□□ 2.36
SMARCD3-201ENST00000262188 PARP2Q9UGN5 583 aa29.81■■■□□ 2.36
SMARCD3-201ENST00000262188 ACRP10323 421 aa29.8■■■□□ 2.36
SMARCD3-201ENST00000262188 SEPT8Q92599 483 aa29.8■■■□□ 2.36
SMARCD3-201ENST00000262188 LACTBL1A8MY62 500 aa29.79■■■□□ 2.36
SMARCD3-201ENST00000262188 MAPK13O15264 365 aa29.79■■■□□ 2.36
SMARCD3-201ENST00000262188 ATF7P17544 494 aaPredicted RBP29.79■■■□□ 2.36
SMARCD3-201ENST00000262188 GCLMP48507 274 aa29.79■■■□□ 2.36
SMARCD3-201ENST00000262188 PSMD6Q15008 389 aa29.79■■■□□ 2.36
SMARCD3-201ENST00000262188 SARM1Q6SZW1 724 aa29.79■■■□□ 2.36
SMARCD3-201ENST00000262188 NDST4Q9H3R1 872 aa29.79■■■□□ 2.36
SMARCD3-201ENST00000262188 ZMYND8Q9ULU4 1186 aaPredicted RBP29.79■■■□□ 2.36
SMARCD3-201ENST00000262188 A0A1B0GTH6 734 aa29.79■■■□□ 2.36
SMARCD3-201ENST00000262188 ADCY5O95622 1261 aa29.79■■■□□ 2.36
SMARCD3-201ENST00000262188 CBWD6Q4V339 395 aa29.79■■■□□ 2.36
SMARCD3-201ENST00000262188 CBWD3Q5JTY5 395 aa29.79■■■□□ 2.36
SMARCD3-201ENST00000262188 CBWD5Q5RIA9 395 aa29.79■■■□□ 2.36
SMARCD3-201ENST00000262188 ZNF516Q92618 1163 aa29.79■■■□□ 2.36
SMARCD3-201ENST00000262188 GEMIN8Q9NWZ8 242 aaKnown RBP29.79■■■□□ 2.36
SMARCD3-201ENST00000262188 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP29.79■■■□□ 2.36
SMARCD3-201ENST00000262188 ANK1P16157 1881 aa29.79■■■□□ 2.36
SMARCD3-201ENST00000262188 ZNF75DP51815 510 aa29.78■■■□□ 2.36
SMARCD3-201ENST00000262188 AFF1P51825 1210 aaKnown RBP29.78■■■□□ 2.36
SMARCD3-201ENST00000262188 GLRA4Q5JXX5 417 aa29.78■■■□□ 2.36
SMARCD3-201ENST00000262188 MFSD5Q6N075 450 aa29.78■■■□□ 2.36
SMARCD3-201ENST00000262188 RGS18Q9NS28 235 aa29.78■■■□□ 2.36
SMARCD3-201ENST00000262188 TRIP11Q15643 1979 aa29.78■■■□□ 2.36
SMARCD3-201ENST00000262188 PTMAP06454 111 aaKnown RBP29.77■■■□□ 2.36
SMARCD3-201ENST00000262188 EFCAB13Q8IY85 973 aa29.77■■■□□ 2.36
SMARCD3-201ENST00000262188 OR5B17Q8NGF7 314 aa29.77■■■□□ 2.36
SMARCD3-201ENST00000262188 BADQ92934 168 aa29.77■■■□□ 2.36
SMARCD3-201ENST00000262188 BCCIPQ9P287 314 aaKnown RBP eCLIP29.77■■■□□ 2.36
SMARCD3-201ENST00000262188 EVI5O60447 810 aa29.77■■■□□ 2.36
SMARCD3-201ENST00000262188 NFICP08651 508 aa29.77■■■□□ 2.36
SMARCD3-201ENST00000262188 NR1I3Q14994 352 aa29.77■■■□□ 2.36
SMARCD3-201ENST00000262188 APBB1IPQ7Z5R6 666 aaPredicted RBP29.77■■■□□ 2.36
SMARCD3-201ENST00000262188 ELMO3Q96BJ8 720 aa29.77■■■□□ 2.36
SMARCD3-201ENST00000262188 ZFP42Q96MM3 310 aa29.77■■■□□ 2.36
SMARCD3-201ENST00000262188 FNBP1Q96RU3 617 aa29.77■■■□□ 2.36
SMARCD3-201ENST00000262188 TSPYL2Q9H2G4 693 aaPredicted RBP29.77■■■□□ 2.36
SMARCD3-201ENST00000262188 PRKAG2Q9UGJ0 569 aa29.77■■■□□ 2.36
SMARCD3-201ENST00000262188 A0A0U1RQF3 1178 aa29.76■■■□□ 2.35
SMARCD3-201ENST00000262188 TTC26A0AVF1 554 aa29.76■■■□□ 2.35
SMARCD3-201ENST00000262188 LGALS16A8MUM7 142 aa29.76■■■□□ 2.35
SMARCD3-201ENST00000262188 C9IYK1 514 aa29.76■■■□□ 2.35
SMARCD3-201ENST00000262188 ENPP3O14638 875 aa29.76■■■□□ 2.35
SMARCD3-201ENST00000262188 LRRN2O75325 713 aa29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms