RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 METTL16Q86W50 562 aaKnown RBP12.78□□□□□ -0.36
COL8A1-201ENST00000261037 PPHLN1Q8NEY8 458 aaKnown RBP12.78□□□□□ -0.36
COL8A1-201ENST00000261037 LRRC37BQ96QE4 947 aa12.78□□□□□ -0.36
COL8A1-201ENST00000261037 ISCA1Q9BUE6 129 aa12.78□□□□□ -0.36
COL8A1-201ENST00000261037 SLC7A5P2Q9GIP4 190 aa12.78□□□□□ -0.36
COL8A1-201ENST00000261037 TJP2Q9UDY2 1190 aa12.78□□□□□ -0.36
COL8A1-201ENST00000261037 USP31Q70CQ4 1352 aa12.78□□□□□ -0.36
COL8A1-201ENST00000261037 RNF103-CHMP3A0A140T963 221 aa12.78□□□□□ -0.36
COL8A1-201ENST00000261037 PDGFRBP09619 1106 aa12.78□□□□□ -0.36
COL8A1-201ENST00000261037 EPHA7Q15375 998 aa12.78□□□□□ -0.36
COL8A1-201ENST00000261037 WDR72Q3MJ13 1102 aa12.78□□□□□ -0.36
COL8A1-201ENST00000261037 ATP11CQ8NB49 1132 aa12.78□□□□□ -0.36
COL8A1-201ENST00000261037 RBM46Q8TBY0 533 aaKnown RBP12.78□□□□□ -0.36
COL8A1-201ENST00000261037 USP11P51784 963 aa12.77□□□□□ -0.36
COL8A1-201ENST00000261037 SP8Q8IXZ3 490 aa12.77□□□□□ -0.36
COL8A1-201ENST00000261037 RFFLQ8WZ73 363 aa12.77□□□□□ -0.36
COL8A1-201ENST00000261037 FARP1Q9Y4F1 1045 aaPredicted RBP12.77□□□□□ -0.36
COL8A1-201ENST00000261037 RTN2O75298 545 aa12.77□□□□□ -0.36
COL8A1-201ENST00000261037 SCP2P22307 547 aa12.77□□□□□ -0.36
COL8A1-201ENST00000261037 SOX11P35716 441 aa12.77□□□□□ -0.36
COL8A1-201ENST00000261037 C16orf87Q6PH81 154 aa12.77□□□□□ -0.36
COL8A1-201ENST00000261037 FRMD5Q7Z6J6 570 aa12.77□□□□□ -0.36
COL8A1-201ENST00000261037 CALR3Q96L12 384 aaKnown RBP12.77□□□□□ -0.36
COL8A1-201ENST00000261037 RNPC3Q96LT9 517 aaKnown RBP12.77□□□□□ -0.36
COL8A1-201ENST00000261037 ZNF560Q96MR9 790 aa12.77□□□□□ -0.36
COL8A1-201ENST00000261037 SYNDIG1Q9H7V2 258 aa12.77□□□□□ -0.36
COL8A1-201ENST00000261037 AIPL1Q9NZN9 384 aa12.77□□□□□ -0.36
COL8A1-201ENST00000261037 MRFAP1Q9Y605 127 aa12.77□□□□□ -0.36
COL8A1-201ENST00000261037 PLEKHG2Q9H7P9 1386 aa12.77□□□□□ -0.37
COL8A1-201ENST00000261037 FAM95CA0A1B0GW59 222 aa12.77□□□□□ -0.37
COL8A1-201ENST00000261037 GRAP2O75791 330 aa12.77□□□□□ -0.37
COL8A1-201ENST00000261037 SEC24DO94855 1032 aaPredicted RBP12.77□□□□□ -0.37
COL8A1-201ENST00000261037 CDK17Q00537 523 aa12.77□□□□□ -0.37
COL8A1-201ENST00000261037 P3H1Q32P28 736 aa12.77□□□□□ -0.37
COL8A1-201ENST00000261037 PLA2G4FQ68DD2 849 aa12.77□□□□□ -0.37
COL8A1-201ENST00000261037 GUF1Q8N442 669 aaKnown RBP12.77□□□□□ -0.37
COL8A1-201ENST00000261037 SLC35G2Q8TBE7 412 aa12.77□□□□□ -0.37
COL8A1-201ENST00000261037 NAF1Q96HR8 494 aaKnown RBP12.77□□□□□ -0.37
COL8A1-201ENST00000261037 MCEEQ96PE7 176 aa12.77□□□□□ -0.37
COL8A1-201ENST00000261037 LBHD1Q9BQE6 289 aaPredicted RBP12.77□□□□□ -0.37
COL8A1-201ENST00000261037 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.77□□□□□ -0.37
COL8A1-201ENST00000261037 LRRIQ1Q96JM4 1722 aa12.77□□□□□ -0.37
COL8A1-201ENST00000261037 ZC3H4Q9UPT8 1303 aaKnown RBP12.77□□□□□ -0.37
COL8A1-201ENST00000261037 GUCY1A3Q02108 690 aa12.77□□□□□ -0.37
COL8A1-201ENST00000261037 APPL2Q8NEU8 664 aa12.77□□□□□ -0.37
COL8A1-201ENST00000261037 ATP6V1G3Q96LB4 118 aa12.77□□□□□ -0.37
COL8A1-201ENST00000261037 REEP2Q9BRK0 252 aa12.77□□□□□ -0.37
COL8A1-201ENST00000261037 TUFT1Q9NNX1 390 aa12.77□□□□□ -0.37
COL8A1-201ENST00000261037 DYRK4Q9NR20 520 aa12.77□□□□□ -0.37
COL8A1-201ENST00000261037 BFARQ9NZS9 450 aa12.77□□□□□ -0.37
COL8A1-201ENST00000261037 ZNF212Q9UDV6 495 aa12.77□□□□□ -0.37
COL8A1-201ENST00000261037 SNX9Q9Y5X1 595 aa12.77□□□□□ -0.37
COL8A1-201ENST00000261037 SNX5Q9Y5X3 404 aa12.77□□□□□ -0.37
COL8A1-201ENST00000261037 ORC4O43929 436 aa12.77□□□□□ -0.37
COL8A1-201ENST00000261037 ASMTLO95671 621 aa12.77□□□□□ -0.37
COL8A1-201ENST00000261037 RARBP10826 455 aa12.77□□□□□ -0.37
COL8A1-201ENST00000261037 ALX1Q15699 326 aa12.77□□□□□ -0.37
COL8A1-201ENST00000261037 C12orf60Q5U649 245 aa12.77□□□□□ -0.37
COL8A1-201ENST00000261037 ATG9AQ7Z3C6 839 aa12.77□□□□□ -0.37
COL8A1-201ENST00000261037 YAF2Q8IY57 180 aa12.77□□□□□ -0.37
COL8A1-201ENST00000261037 NSUN4Q96CB9 384 aaKnown RBP12.77□□□□□ -0.37
COL8A1-201ENST00000261037 DACH2Q96NX9 599 aa12.77□□□□□ -0.37
COL8A1-201ENST00000261037 LRRC1Q9BTT6 524 aa12.77□□□□□ -0.37
COL8A1-201ENST00000261037 KIFC3Q9BVG8 833 aa12.77□□□□□ -0.37
COL8A1-201ENST00000261037 TRIM10Q9UDY6 481 aa12.77□□□□□ -0.37
COL8A1-201ENST00000261037 FLT1P17948 1338 aa12.76□□□□□ -0.37
COL8A1-201ENST00000261037 ASB14A6NK59 587 aa12.76□□□□□ -0.37
COL8A1-201ENST00000261037 KCNA4P22459 653 aa12.76□□□□□ -0.37
COL8A1-201ENST00000261037 TTC23LQ6PF05 361 aa12.76□□□□□ -0.37
COL8A1-201ENST00000261037 ELMO2Q96JJ3 720 aa12.76□□□□□ -0.37
COL8A1-201ENST00000261037 EIF2AQ9BY44 585 aaKnown RBP12.76□□□□□ -0.37
COL8A1-201ENST00000261037 SMARCAL1Q9NZC9 954 aa12.76□□□□□ -0.37
COL8A1-201ENST00000261037 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.76□□□□□ -0.37
COL8A1-201ENST00000261037 TNPO2O14787 897 aaKnown RBP12.76□□□□□ -0.37
COL8A1-201ENST00000261037 MYO1DO94832 1006 aa12.76□□□□□ -0.37
COL8A1-201ENST00000261037 PCSK7Q16549 785 aa12.76□□□□□ -0.37
COL8A1-201ENST00000261037 RAET1EQ8TD07 263 aa12.76□□□□□ -0.37
COL8A1-201ENST00000261037 TMEM117Q9H0C3 514 aa12.76□□□□□ -0.37
COL8A1-201ENST00000261037 ZCCHC17Q9NP64 241 aaKnown RBP12.76□□□□□ -0.37
COL8A1-201ENST00000261037 MAP3K20Q9NYL2 800 aaKnown RBP12.76□□□□□ -0.37
COL8A1-201ENST00000261037 OVOS2A0A0G2JMS6 1433 aa12.76□□□□□ -0.37
COL8A1-201ENST00000261037 OVOS2A0A0J9YW53 1432 aa12.76□□□□□ -0.37
COL8A1-201ENST00000261037 OVOS2Q6IE36 1432 aa12.76□□□□□ -0.37
COL8A1-201ENST00000261037 FAM187AA6NFU0 413 aa12.76□□□□□ -0.37
COL8A1-201ENST00000261037 MEFVO15553 781 aaPredicted RBP12.76□□□□□ -0.37
COL8A1-201ENST00000261037 ATMINO43313 823 aaPredicted RBP12.76□□□□□ -0.37
COL8A1-201ENST00000261037 ENO1P06733 434 aaKnown RBP12.76□□□□□ -0.37
COL8A1-201ENST00000261037 FMR1Q06787 632 aaKnown RBP eCLIP12.76□□□□□ -0.37
COL8A1-201ENST00000261037 BAATQ14032 418 aaPredicted RBP12.76□□□□□ -0.37
COL8A1-201ENST00000261037 HIF1AQ16665 826 aa12.76□□□□□ -0.37
COL8A1-201ENST00000261037 LONRF1Q17RB8 773 aa12.76□□□□□ -0.37
COL8A1-201ENST00000261037 FAM117BQ6P1L5 589 aa12.76□□□□□ -0.37
COL8A1-201ENST00000261037 NEDD1Q8NHV4 660 aa12.76□□□□□ -0.37
COL8A1-201ENST00000261037 TBC1D16Q8TBP0 767 aa12.76□□□□□ -0.37
COL8A1-201ENST00000261037 WDR24Q96S15 920 aa12.76□□□□□ -0.37
COL8A1-201ENST00000261037 YIPF2Q9BWQ6 316 aa12.76□□□□□ -0.37
COL8A1-201ENST00000261037 HPS4Q9NQG7 708 aa12.76□□□□□ -0.37
COL8A1-201ENST00000261037 AURKCQ9UQB9 309 aa12.76□□□□□ -0.37
COL8A1-201ENST00000261037 DAGLAQ9Y4D2 1042 aa12.76□□□□□ -0.37
COL8A1-201ENST00000261037 HOXD10P28358 340 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms