RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 CEP120Q8N960 986 aa24.14■■□□□ 1.46
SIX3-201ENST00000260653 OR5B17Q8NGF7 314 aa24.14■■□□□ 1.46
SIX3-201ENST00000260653 SCLT1Q96NL6 688 aa24.14■■□□□ 1.46
SIX3-201ENST00000260653 SYT11Q9BT88 431 aa24.14■■□□□ 1.46
SIX3-201ENST00000260653 LUC7LQ9NQ29 371 aaKnown RBP24.14■■□□□ 1.46
SIX3-201ENST00000260653 MRFAP1Q9Y605 127 aa24.14■■□□□ 1.46
SIX3-201ENST00000260653 MYH10P35580 1976 aa24.14■■□□□ 1.45
SIX3-201ENST00000260653 HLA-DRAP01903 254 aa24.14■■□□□ 1.45
SIX3-201ENST00000260653 AKR1A1P14550 325 aa24.14■■□□□ 1.45
SIX3-201ENST00000260653 ANXA13P27216 316 aa24.14■■□□□ 1.45
SIX3-201ENST00000260653 VPS36Q86VN1 386 aa24.14■■□□□ 1.45
SIX3-201ENST00000260653 THNSL1Q8IYQ7 743 aa24.14■■□□□ 1.45
SIX3-201ENST00000260653 LNX1Q8TBB1 728 aaPredicted RBP24.14■■□□□ 1.45
SIX3-201ENST00000260653 CAPNS2Q96L46 248 aa24.14■■□□□ 1.45
SIX3-201ENST00000260653 FAM49AQ9H0Q0 323 aaPredicted RBP24.14■■□□□ 1.45
SIX3-201ENST00000260653 CDT1Q9H211 546 aa24.14■■□□□ 1.45
SIX3-201ENST00000260653 CPSF3Q9UKF6 684 aaKnown RBP24.14■■□□□ 1.45
SIX3-201ENST00000260653 NENFQ9UMX5 172 aa24.14■■□□□ 1.45
SIX3-201ENST00000260653 TNFSF13BQ9Y275 285 aa24.14■■□□□ 1.45
SIX3-201ENST00000260653 Q9Y3F1 56 aa24.14■■□□□ 1.45
SIX3-201ENST00000260653 NRCAMQ92823 1304 aa24.13■■□□□ 1.45
SIX3-201ENST00000260653 MOCS3O95396 460 aa24.13■■□□□ 1.45
SIX3-201ENST00000260653 VNN1O95497 513 aa24.13■■□□□ 1.45
SIX3-201ENST00000260653 CCDC172P0C7W6 258 aa24.13■■□□□ 1.45
SIX3-201ENST00000260653 USP8P40818 1118 aa24.13■■□□□ 1.45
SIX3-201ENST00000260653 MFAP3P55082 362 aa24.13■■□□□ 1.45
SIX3-201ENST00000260653 OSTNP61366 133 aa24.13■■□□□ 1.45
SIX3-201ENST00000260653 HIC1Q14526 733 aa24.13■■□□□ 1.45
SIX3-201ENST00000260653 BMS1Q14692 1282 aaKnown RBP24.13■■□□□ 1.45
SIX3-201ENST00000260653 FAM187BQ17R55 369 aa24.13■■□□□ 1.45
SIX3-201ENST00000260653 ALKBH5Q6P6C2 394 aaKnown RBP24.13■■□□□ 1.45
SIX3-201ENST00000260653 GLYCTKQ8IVS8 523 aa24.13■■□□□ 1.45
SIX3-201ENST00000260653 ZEB2O60315 1214 aa24.13■■□□□ 1.45
SIX3-201ENST00000260653 PIK3CAP42336 1068 aa24.13■■□□□ 1.45
SIX3-201ENST00000260653 PRKCZQ05513 592 aa24.13■■□□□ 1.45
SIX3-201ENST00000260653 FSCN1Q16658 493 aaKnown RBP24.13■■□□□ 1.45
SIX3-201ENST00000260653 TXLNBQ8N3L3 684 aa24.13■■□□□ 1.45
SIX3-201ENST00000260653 VTI1AQ96AJ9 217 aa24.13■■□□□ 1.45
SIX3-201ENST00000260653 FAM212AQ96EL1 285 aa24.13■■□□□ 1.45
SIX3-201ENST00000260653 HTTP42858 3142 aa24.12■■□□□ 1.45
SIX3-201ENST00000260653 ENC1O14682 589 aa24.12■■□□□ 1.45
SIX3-201ENST00000260653 CYBAP13498 195 aa24.12■■□□□ 1.45
SIX3-201ENST00000260653 PSEN2P49810 448 aa24.12■■□□□ 1.45
SIX3-201ENST00000260653 TMEM62Q0P6H9 643 aa24.12■■□□□ 1.45
SIX3-201ENST00000260653 NAB2Q15742 525 aa24.12■■□□□ 1.45
SIX3-201ENST00000260653 SHC3Q92529 594 aa24.12■■□□□ 1.45
SIX3-201ENST00000260653 NAA30Q147X3 362 aaPredicted RBP24.12■■□□□ 1.45
SIX3-201ENST00000260653 KIZQ2M2Z5 673 aa24.12■■□□□ 1.45
SIX3-201ENST00000260653 DEFB115Q30KQ5 88 aa24.12■■□□□ 1.45
SIX3-201ENST00000260653 SLC30A5Q8TAD4 765 aa24.12■■□□□ 1.45
SIX3-201ENST00000260653 CPB2Q96IY4 423 aa24.12■■□□□ 1.45
SIX3-201ENST00000260653 TRIP12Q14669 1992 aaPredicted RBP24.12■■□□□ 1.45
SIX3-201ENST00000260653 MYADML2A6NDP7 307 aa24.11■■□□□ 1.45
SIX3-201ENST00000260653 HAS3O00219 553 aa24.11■■□□□ 1.45
SIX3-201ENST00000260653 DYNC1I1O14576 645 aa24.11■■□□□ 1.45
SIX3-201ENST00000260653 FAM71AQ8IYT1 594 aa24.11■■□□□ 1.45
SIX3-201ENST00000260653 DHX38Q92620 1227 aaKnown RBP24.11■■□□□ 1.45
SIX3-201ENST00000260653 C1orf112Q9NSG2 853 aa24.11■■□□□ 1.45
SIX3-201ENST00000260653 DNAH12Q6ZR08 3092 aa24.11■■□□□ 1.45
SIX3-201ENST00000260653 GPR25O00155 361 aa24.11■■□□□ 1.45
SIX3-201ENST00000260653 ZC3H11AO75152 810 aaKnown RBP eCLIP24.11■■□□□ 1.45
SIX3-201ENST00000260653 SCARA3Q6AZY7 606 aa24.11■■□□□ 1.45
SIX3-201ENST00000260653 TMEM192Q8IY95 271 aa24.11■■□□□ 1.45
SIX3-201ENST00000260653 U2AF1L4Q8WU68 220 aaKnown RBP24.11■■□□□ 1.45
SIX3-201ENST00000260653 SLC20A1Q8WUM9 679 aa24.11■■□□□ 1.45
SIX3-201ENST00000260653 CARD6Q9BX69 1037 aa24.11■■□□□ 1.45
SIX3-201ENST00000260653 PDZD7Q9H5P4 517 aa24.11■■□□□ 1.45
SIX3-201ENST00000260653 GINS2Q9Y248 185 aa24.11■■□□□ 1.45
SIX3-201ENST00000260653 MBLAC1A4D2B0 266 aaPredicted RBP24.1■■□□□ 1.45
SIX3-201ENST00000260653 BUB1O43683 1085 aa24.1■■□□□ 1.45
SIX3-201ENST00000260653 ARF4P18085 180 aaPredicted RBP24.1■■□□□ 1.45
SIX3-201ENST00000260653 TRIM32Q13049 653 aa24.1■■□□□ 1.45
SIX3-201ENST00000260653 MFSD14CQ5VZR4 134 aa24.1■■□□□ 1.45
SIX3-201ENST00000260653 SPOPLQ6IQ16 392 aa24.1■■□□□ 1.45
SIX3-201ENST00000260653 RUFY4Q6ZNE9 571 aa24.1■■□□□ 1.45
SIX3-201ENST00000260653 IPO4Q8TEX9 1081 aaKnown RBP24.1■■□□□ 1.45
SIX3-201ENST00000260653 ARID3AQ99856 593 aa24.1■■□□□ 1.45
SIX3-201ENST00000260653 ACP6Q9NPH0 428 aa24.1■■□□□ 1.45
SIX3-201ENST00000260653 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.1■■□□□ 1.45
SIX3-201ENST00000260653 V9GYY5 206 aaPredicted RBP24.1■■□□□ 1.45
SIX3-201ENST00000260653 ATP1A1P05023 1023 aaKnown RBP24.1■■□□□ 1.45
SIX3-201ENST00000260653 C10orf76Q5T2E6 689 aa24.1■■□□□ 1.45
SIX3-201ENST00000260653 ZNF410Q86VK4 478 aa24.1■■□□□ 1.45
SIX3-201ENST00000260653 PALB2Q86YC2 1186 aa24.1■■□□□ 1.45
SIX3-201ENST00000260653 WDR49Q8IV35 697 aa24.1■■□□□ 1.45
SIX3-201ENST00000260653 TRIM58Q8NG06 486 aa24.1■■□□□ 1.45
SIX3-201ENST00000260653 MTMR12Q9C0I1 747 aa24.1■■□□□ 1.45
SIX3-201ENST00000260653 ANK1P16157 1881 aa24.09■■□□□ 1.45
SIX3-201ENST00000260653 CYP26A1O43174 497 aa24.09■■□□□ 1.45
SIX3-201ENST00000260653 DUSP11O75319 330 aaKnown RBP24.09■■□□□ 1.45
SIX3-201ENST00000260653 TACC1O75410 805 aa24.09■■□□□ 1.45
SIX3-201ENST00000260653 TFRCP02786 760 aaKnown RBP24.09■■□□□ 1.45
SIX3-201ENST00000260653 C6orf222P0C671 652 aaPredicted RBP24.09■■□□□ 1.45
SIX3-201ENST00000260653 FGFR4P22455 802 aa24.09■■□□□ 1.45
SIX3-201ENST00000260653 PURAQ00577 322 aaKnown RBP24.09■■□□□ 1.45
SIX3-201ENST00000260653 GCNT1Q02742 428 aa24.09■■□□□ 1.45
SIX3-201ENST00000260653 WDR44Q5JSH3 913 aa24.09■■□□□ 1.45
SIX3-201ENST00000260653 ERO1AQ96HE7 468 aa24.09■■□□□ 1.45
SIX3-201ENST00000260653 HDAC6Q9UBN7 1215 aa24.09■■□□□ 1.45
SIX3-201ENST00000260653 TSPAN1O60635 241 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms