RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 DOCK6Q96HP0 2047 aa20.9■□□□□ 0.94
TM6SF1-201ENST00000258909 VWA3AA6NCI4 1184 aa20.89■□□□□ 0.94
TM6SF1-201ENST00000258909 GBP2P32456 591 aaPredicted RBP20.89■□□□□ 0.94
TM6SF1-201ENST00000258909 ATP2C1P98194 919 aaPredicted RBP20.89■□□□□ 0.94
TM6SF1-201ENST00000258909 DMP1Q13316 513 aaPredicted RBP20.89■□□□□ 0.94
TM6SF1-201ENST00000258909 TAS1R3Q7RTX0 852 aa20.89■□□□□ 0.94
TM6SF1-201ENST00000258909 LNX1Q8TBB1 728 aaPredicted RBP20.89■□□□□ 0.94
TM6SF1-201ENST00000258909 PNMA5Q96PV4 448 aa20.89■□□□□ 0.94
TM6SF1-201ENST00000258909 ACO2Q99798 780 aaKnown RBP20.89■□□□□ 0.94
TM6SF1-201ENST00000258909 TARS2Q9BW92 718 aaKnown RBP20.89■□□□□ 0.94
TM6SF1-201ENST00000258909 NT5C3AQ9H0P0 336 aa20.89■□□□□ 0.94
TM6SF1-201ENST00000258909 CDT1Q9H211 546 aa20.89■□□□□ 0.94
TM6SF1-201ENST00000258909 PLEKHA4Q9H4M7 779 aa20.89■□□□□ 0.94
TM6SF1-201ENST00000258909 UPF2Q9HAU5 1272 aaKnown RBP20.89■□□□□ 0.94
TM6SF1-201ENST00000258909 PIDD1Q9HB75 910 aa20.89■□□□□ 0.94
TM6SF1-201ENST00000258909 GOLGA2P5Q9HBQ8 144 aa20.89■□□□□ 0.94
TM6SF1-201ENST00000258909 WDR6Q9NNW5 1121 aaKnown RBP20.89■□□□□ 0.94
TM6SF1-201ENST00000258909 MYH11P35749 1972 aa20.89■□□□□ 0.93
TM6SF1-201ENST00000258909 CLUHO75153 1309 aa20.89■□□□□ 0.93
TM6SF1-201ENST00000258909 PHLPP2Q6ZVD8 1323 aa20.89■□□□□ 0.93
TM6SF1-201ENST00000258909 SLC16A4O15374 487 aa20.88■□□□□ 0.93
TM6SF1-201ENST00000258909 MRE11P49959 708 aa20.88■□□□□ 0.93
TM6SF1-201ENST00000258909 TCF15Q12870 199 aa20.88■□□□□ 0.93
TM6SF1-201ENST00000258909 PSMD5Q16401 504 aa20.88■□□□□ 0.93
TM6SF1-201ENST00000258909 ZNF568Q3ZCX4 644 aa20.88■□□□□ 0.93
TM6SF1-201ENST00000258909 GPR65Q8IYL9 337 aa20.88■□□□□ 0.93
TM6SF1-201ENST00000258909 HDAC7Q8WUI4 952 aa20.88■□□□□ 0.93
TM6SF1-201ENST00000258909 DRC1Q96MC2 740 aa20.88■□□□□ 0.93
TM6SF1-201ENST00000258909 PPP1R10Q96QC0 940 aaKnown RBP20.88■□□□□ 0.93
TM6SF1-201ENST00000258909 CLSTN3Q9BQT9 956 aa20.88■□□□□ 0.93
TM6SF1-201ENST00000258909 KCNK12Q9HB15 430 aa20.88■□□□□ 0.93
TM6SF1-201ENST00000258909 DOCK8Q8NF50 2099 aa20.88■□□□□ 0.93
TM6SF1-201ENST00000258909 CACNA1HO95180 2353 aa20.88■□□□□ 0.93
TM6SF1-201ENST00000258909 ADAM12O43184 909 aa20.88■□□□□ 0.93
TM6SF1-201ENST00000258909 CLCNKBP51801 687 aa20.88■□□□□ 0.93
TM6SF1-201ENST00000258909 CREMQ03060 361 aa20.88■□□□□ 0.93
TM6SF1-201ENST00000258909 RSAD2Q8WXG1 361 aa20.88■□□□□ 0.93
TM6SF1-201ENST00000258909 PIK3R5Q8WYR1 880 aa20.88■□□□□ 0.93
TM6SF1-201ENST00000258909 MYADMQ96S97 322 aa20.88■□□□□ 0.93
TM6SF1-201ENST00000258909 MRPL4Q9BYD3 311 aaKnown RBP20.88■□□□□ 0.93
TM6SF1-201ENST00000258909 TMEM134Q9H6X4 195 aa20.88■□□□□ 0.93
TM6SF1-201ENST00000258909 PTPRHQ9HD43 1115 aa20.88■□□□□ 0.93
TM6SF1-201ENST00000258909 ARHGAP28Q9P2N2 729 aa20.88■□□□□ 0.93
TM6SF1-201ENST00000258909 SMC3Q9UQE7 1217 aa20.88■□□□□ 0.93
TM6SF1-201ENST00000258909 I3L4J1 428 aa20.87■□□□□ 0.93
TM6SF1-201ENST00000258909 B3GAT3O94766 335 aa20.87■□□□□ 0.93
TM6SF1-201ENST00000258909 HARSP12081 509 aaKnown RBP20.87■□□□□ 0.93
TM6SF1-201ENST00000258909 PTPN5P54829 565 aa20.87■□□□□ 0.93
TM6SF1-201ENST00000258909 TDGQ13569 410 aa20.87■□□□□ 0.93
TM6SF1-201ENST00000258909 APBB1IPQ7Z5R6 666 aaPredicted RBP20.87■□□□□ 0.93
TM6SF1-201ENST00000258909 ST13P5Q8NFI4 369 aaPredicted RBP20.87■□□□□ 0.93
TM6SF1-201ENST00000258909 TCHPQ9BT92 498 aa20.87■□□□□ 0.93
TM6SF1-201ENST00000258909 CCDC94Q9BW85 323 aaPredicted RBP20.87■□□□□ 0.93
TM6SF1-201ENST00000258909 PRKD2Q9BZL6 878 aa20.87■□□□□ 0.93
TM6SF1-201ENST00000258909 NPHP3-ACAD11A0A0J9YXS1 232 aa20.86■□□□□ 0.93
TM6SF1-201ENST00000258909 SMIM28A0A1B0GU29 152 aa20.86■□□□□ 0.93
TM6SF1-201ENST00000258909 ZMYND10O75800 440 aa20.86■□□□□ 0.93
TM6SF1-201ENST00000258909 GRM5P41594 1212 aa20.86■□□□□ 0.93
TM6SF1-201ENST00000258909 CACNB1Q02641 598 aaPredicted RBP20.86■□□□□ 0.93
TM6SF1-201ENST00000258909 SOX4Q06945 474 aaPredicted RBP20.86■□□□□ 0.93
TM6SF1-201ENST00000258909 CD300LGQ6UXG3 332 aa20.86■□□□□ 0.93
TM6SF1-201ENST00000258909 CYP26C1Q6V0L0 522 aa20.86■□□□□ 0.93
TM6SF1-201ENST00000258909 STAMQ92783 540 aa20.86■□□□□ 0.93
TM6SF1-201ENST00000258909 ZBTB45Q96K62 511 aaPredicted RBP20.86■□□□□ 0.93
TM6SF1-201ENST00000258909 ZDHHC7Q9NXF8 308 aa20.86■□□□□ 0.93
TM6SF1-201ENST00000258909 CITO14578 2027 aa20.85■□□□□ 0.93
TM6SF1-201ENST00000258909 NARSO43776 548 aaKnown RBP20.85■□□□□ 0.93
TM6SF1-201ENST00000258909 C1RP00736 705 aa20.85■□□□□ 0.93
TM6SF1-201ENST00000258909 YARSP54577 528 aaKnown RBP20.85■□□□□ 0.93
TM6SF1-201ENST00000258909 ELAVL2Q12926 359 aaKnown RBP20.85■□□□□ 0.93
TM6SF1-201ENST00000258909 UPP1Q16831 310 aa20.85■□□□□ 0.93
TM6SF1-201ENST00000258909 HYIQ5T013 277 aa20.85■□□□□ 0.93
TM6SF1-201ENST00000258909 LARP1BQ659C4 914 aaKnown RBP20.85■□□□□ 0.93
TM6SF1-201ENST00000258909 DCLRE1AQ6PJP8 1040 aa20.85■□□□□ 0.93
TM6SF1-201ENST00000258909 GET4Q7L5D6 327 aaPredicted RBP20.85■□□□□ 0.93
TM6SF1-201ENST00000258909 TMEM105Q8N8V8 129 aa20.85■□□□□ 0.93
TM6SF1-201ENST00000258909 SYT2Q8N9I0 419 aaPredicted RBP20.85■□□□□ 0.93
TM6SF1-201ENST00000258909 C3orf58Q8NDZ4 430 aa20.85■□□□□ 0.93
TM6SF1-201ENST00000258909 CDK5RAP3Q96JB5 506 aa20.85■□□□□ 0.93
TM6SF1-201ENST00000258909 PRRX2Q99811 253 aa20.85■□□□□ 0.93
TM6SF1-201ENST00000258909 RHOBTB2Q9BYZ6 727 aa20.85■□□□□ 0.93
TM6SF1-201ENST00000258909 MFSD1Q9H3U5 465 aa20.85■□□□□ 0.93
TM6SF1-201ENST00000258909 FAM86C1Q9NVL1 165 aa20.85■□□□□ 0.93
TM6SF1-201ENST00000258909 FBXW11Q9UKB1 542 aa20.85■□□□□ 0.93
TM6SF1-201ENST00000258909 RBM19Q9Y4C8 960 aaKnown RBP20.85■□□□□ 0.93
TM6SF1-201ENST00000258909 ABLIM1O14639 778 aa20.84■□□□□ 0.93
TM6SF1-201ENST00000258909 PLA2G4BP0C869 781 aa20.84■□□□□ 0.93
TM6SF1-201ENST00000258909 GUCY2CP25092 1073 aa20.84■□□□□ 0.93
TM6SF1-201ENST00000258909 BRCC3P46736 316 aa20.84■□□□□ 0.93
TM6SF1-201ENST00000258909 SLC12A3P55017 1021 aa20.84■□□□□ 0.93
TM6SF1-201ENST00000258909 SEZ6Q53EL9 994 aa20.84■□□□□ 0.93
TM6SF1-201ENST00000258909 ALKAL1Q6UXT8 129 aa20.84■□□□□ 0.93
TM6SF1-201ENST00000258909 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.84■□□□□ 0.93
TM6SF1-201ENST00000258909 ZMAT2Q96NC0 199 aaKnown RBP20.84■□□□□ 0.93
TM6SF1-201ENST00000258909 TBC1D32Q96NH3 1257 aa20.84■□□□□ 0.93
TM6SF1-201ENST00000258909 C17orf75Q9HAS0 396 aa20.84■□□□□ 0.93
TM6SF1-201ENST00000258909 USP34Q70CQ2 3546 aa20.84■□□□□ 0.93
TM6SF1-201ENST00000258909 PLS3P13797 630 aa20.83■□□□□ 0.93
TM6SF1-201ENST00000258909 FGFR3P22607 806 aa20.83■□□□□ 0.93
TM6SF1-201ENST00000258909 PROZP22891 400 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms