RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 TMEM57Q8N5G2 664 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 GATA6Q92908 595 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 ALKBH8Q96BT7 664 aaKnown RBP8.22□□□□□ -1.09
GPNMB-201ENST00000258733 TMA16Q96EY4 203 aaKnown RBP8.22□□□□□ -1.09
GPNMB-201ENST00000258733 CMTM3Q96MX0 182 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 ESYT1Q9BSJ8 1104 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 SELENOOQ9BVL4 669 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 GGNBP2Q9H3C7 697 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 RNF41Q9H4P4 317 aaPredicted RBP8.22□□□□□ -1.09
GPNMB-201ENST00000258733 CAAP1Q9H8G2 361 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 MARCH7Q9H992 704 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 ASNSD1Q9NWL6 643 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 GPRC5BQ9NZH0 403 aa8.22□□□□□ -1.09
GPNMB-201ENST00000258733 SYNMO15061 1565 aa8.21□□□□□ -1.09
GPNMB-201ENST00000258733 SMCO2A6NFE2 343 aa8.21□□□□□ -1.09
GPNMB-201ENST00000258733 CENPBD1B2RD01 187 aa8.21□□□□□ -1.09
GPNMB-201ENST00000258733 TNFRSF10BO14763 440 aa8.21□□□□□ -1.09
GPNMB-201ENST00000258733 RASGRP1O95267 797 aa8.21□□□□□ -1.09
GPNMB-201ENST00000258733 TARSP26639 723 aaKnown RBP8.21□□□□□ -1.09
GPNMB-201ENST00000258733 RGS2P41220 211 aa8.21□□□□□ -1.09
GPNMB-201ENST00000258733 VPS41P49754 854 aa8.21□□□□□ -1.09
GPNMB-201ENST00000258733 BCAP31P51572 246 aa8.21□□□□□ -1.09
GPNMB-201ENST00000258733 MRPS5P82675 430 aaKnown RBP8.21□□□□□ -1.09
GPNMB-201ENST00000258733 CHRNEQ04844 493 aa8.21□□□□□ -1.09
GPNMB-201ENST00000258733 WSCD2Q2TBF2 565 aa8.21□□□□□ -1.09
GPNMB-201ENST00000258733 STRA8Q7Z7C7 330 aa8.21□□□□□ -1.09
GPNMB-201ENST00000258733 GLRX5Q86SX6 157 aa8.21□□□□□ -1.09
GPNMB-201ENST00000258733 TBC1D21Q8IYX1 336 aa8.21□□□□□ -1.09
GPNMB-201ENST00000258733 IPMKQ8NFU5 416 aa8.21□□□□□ -1.09
GPNMB-201ENST00000258733 FAM89AQ96GI7 184 aa8.21□□□□□ -1.09
GPNMB-201ENST00000258733 COX4I2Q96KJ9 171 aa8.21□□□□□ -1.09
GPNMB-201ENST00000258733 CEP170P1Q96L14 293 aa8.21□□□□□ -1.09
GPNMB-201ENST00000258733 GDAP1L1Q96MZ0 367 aa8.21□□□□□ -1.09
GPNMB-201ENST00000258733 RUNDC3BQ96NL0 473 aa8.21□□□□□ -1.09
GPNMB-201ENST00000258733 EDEM3Q9BZQ6 932 aa8.21□□□□□ -1.09
GPNMB-201ENST00000258733 MRM3Q9HC36 420 aaKnown RBP8.21□□□□□ -1.09
GPNMB-201ENST00000258733 POLHQ9Y253 713 aa8.21□□□□□ -1.09
GPNMB-201ENST00000258733 AP3M1Q9Y2T2 418 aa8.21□□□□□ -1.09
GPNMB-201ENST00000258733 PPP2R2CQ9Y2T4 447 aa8.21□□□□□ -1.09
GPNMB-201ENST00000258733 COQ6Q9Y2Z9 468 aa8.21□□□□□ -1.09
GPNMB-201ENST00000258733 EID1Q9Y6B2 187 aa8.21□□□□□ -1.09
GPNMB-201ENST00000258733 SBNO1A3KN83 1393 aa8.21□□□□□ -1.09
GPNMB-201ENST00000258733 PCM1Q15154 2024 aa8.21□□□□□ -1.09
GPNMB-201ENST00000258733 A2MP01023 1474 aa8.21□□□□□ -1.09
GPNMB-201ENST00000258733 GMNCA6NCL1 334 aa8.21□□□□□ -1.1
GPNMB-201ENST00000258733 PIK3CDO00329 1044 aa8.21□□□□□ -1.1
GPNMB-201ENST00000258733 TOR1BO14657 336 aa8.21□□□□□ -1.1
GPNMB-201ENST00000258733 GPC4O75487 556 aa8.21□□□□□ -1.1
GPNMB-201ENST00000258733 RHOBTB3O94955 611 aa8.21□□□□□ -1.1
GPNMB-201ENST00000258733 SNX4O95219 450 aa8.21□□□□□ -1.1
GPNMB-201ENST00000258733 ZBTB11O95625 1053 aaPredicted RBP8.21□□□□□ -1.1
GPNMB-201ENST00000258733 PABPC4LP0CB38 370 aaKnown RBP8.21□□□□□ -1.1
GPNMB-201ENST00000258733 CALB2P22676 271 aa8.21□□□□□ -1.1
GPNMB-201ENST00000258733 HADHAP40939 763 aa8.21□□□□□ -1.1
GPNMB-201ENST00000258733 STAT2P52630 851 aa8.21□□□□□ -1.1
GPNMB-201ENST00000258733 P2RX3P56373 397 aa8.21□□□□□ -1.1
GPNMB-201ENST00000258733 KCNJ2P63252 427 aa8.21□□□□□ -1.1
GPNMB-201ENST00000258733 TGFBIQ15582 683 aa8.21□□□□□ -1.1
GPNMB-201ENST00000258733 KCNJ8Q15842 424 aa8.21□□□□□ -1.1
GPNMB-201ENST00000258733 FAM209BQ5JX69 171 aa8.21□□□□□ -1.1
GPNMB-201ENST00000258733 RBM43Q6ZSC3 357 aaKnown RBP8.21□□□□□ -1.1
GPNMB-201ENST00000258733 LRRC71Q8N4P6 559 aa8.21□□□□□ -1.1
GPNMB-201ENST00000258733 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.21□□□□□ -1.1
GPNMB-201ENST00000258733 CFAP61Q8NHU2 1237 aa8.21□□□□□ -1.1
GPNMB-201ENST00000258733 GIPC3Q8TF64 312 aa8.21□□□□□ -1.1
GPNMB-201ENST00000258733 APBA2Q99767 749 aa8.21□□□□□ -1.1
GPNMB-201ENST00000258733 HEMGNQ9BXL5 484 aa8.21□□□□□ -1.1
GPNMB-201ENST00000258733 CDH19Q9H159 772 aa8.21□□□□□ -1.1
GPNMB-201ENST00000258733 CRLF2Q9HC73 371 aa8.21□□□□□ -1.1
GPNMB-201ENST00000258733 ATP6V1HQ9UI12 483 aa8.21□□□□□ -1.1
GPNMB-201ENST00000258733 TEKT2Q9UIF3 430 aa8.21□□□□□ -1.1
GPNMB-201ENST00000258733 PCDHGA2Q9Y5H1 932 aa8.21□□□□□ -1.1
GPNMB-201ENST00000258733 MYO3AQ8NEV4 1616 aa8.21□□□□□ -1.1
GPNMB-201ENST00000258733 CFAP74Q9C0B2 1584 aa8.21□□□□□ -1.1
GPNMB-201ENST00000258733 NPHP3Q7Z494 1330 aa8.21□□□□□ -1.1
GPNMB-201ENST00000258733 C5orf60A6NFR6 353 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 LRRIQ4A6NIV6 560 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 CHURC1-FNTBB4DL54 471 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 PRRT4C9JH25 899 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 ZBTB43O43298 467 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 ZBTB14O43829 449 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 COBLO75128 1261 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 PIGNO95427 931 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 ICAM2P13598 275 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 IDUAP35475 653 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 HSPA9P38646 679 aaKnown RBP8.2□□□□□ -1.1
GPNMB-201ENST00000258733 ADCY7P51828 1080 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 COPB1P53618 953 aaKnown RBP8.2□□□□□ -1.1
GPNMB-201ENST00000258733 ATN1P54259 1190 aaPredicted RBP8.2□□□□□ -1.1
GPNMB-201ENST00000258733 RTP1P59025 263 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 PRAMEP78395 509 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 FKBP4Q02790 459 aaKnown RBP eCLIP8.2□□□□□ -1.1
GPNMB-201ENST00000258733 KPNB1Q14974 876 aaKnown RBP8.2□□□□□ -1.1
GPNMB-201ENST00000258733 OASLQ15646 514 aaKnown RBP8.2□□□□□ -1.1
GPNMB-201ENST00000258733 GRIK5Q16478 980 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 IKBIPQ70UQ0 350 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 KCTD20Q7Z5Y7 419 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 FAM124AQ86V42 546 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 GALNT13Q8IUC8 556 aa8.2□□□□□ -1.1
GPNMB-201ENST00000258733 NPAS4Q8IUM7 802 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms