RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 PTPN22Q9Y2R2 807 aa10.24□□□□□ -0.77
NIP7-202ENST00000254941 C4BPAP04003 597 aaKnown RBP10.23□□□□□ -0.77
NIP7-202ENST00000254941 AP3M2P53677 418 aa10.23□□□□□ -0.77
NIP7-202ENST00000254941 JAM2P57087 298 aa10.23□□□□□ -0.77
NIP7-202ENST00000254941 C1QTNF8P60827 252 aa10.23□□□□□ -0.77
NIP7-202ENST00000254941 PTPN11Q06124 597 aaPredicted RBP10.23□□□□□ -0.77
NIP7-202ENST00000254941 ENOX2Q16206 610 aaKnown RBP10.23□□□□□ -0.77
NIP7-202ENST00000254941 KYAT1Q16773 422 aa10.23□□□□□ -0.77
NIP7-202ENST00000254941 SFMBT2Q5VUG0 894 aa10.23□□□□□ -0.77
NIP7-202ENST00000254941 IQCEQ6IPM2 695 aa10.23□□□□□ -0.77
NIP7-202ENST00000254941 PHLDB3Q6NSJ2 640 aa10.23□□□□□ -0.77
NIP7-202ENST00000254941 CATSPER4Q7RTX7 472 aa10.23□□□□□ -0.77
NIP7-202ENST00000254941 RSPH3Q86UC2 560 aa10.23□□□□□ -0.77
NIP7-202ENST00000254941 CEP120Q8N960 986 aa10.23□□□□□ -0.77
NIP7-202ENST00000254941 ARRDC4Q8NCT1 418 aa10.23□□□□□ -0.77
NIP7-202ENST00000254941 TAS1R2Q8TE23 839 aa10.23□□□□□ -0.77
NIP7-202ENST00000254941 SH3TC2Q8TF17 1288 aa10.23□□□□□ -0.77
NIP7-202ENST00000254941 SEMA4DQ92854 862 aa10.23□□□□□ -0.77
NIP7-202ENST00000254941 GLT1D1Q96MS3 346 aa10.23□□□□□ -0.77
NIP7-202ENST00000254941 SPAG5Q96R06 1193 aa10.23□□□□□ -0.77
NIP7-202ENST00000254941 CGRRF1Q99675 332 aa10.23□□□□□ -0.77
NIP7-202ENST00000254941 ADPGKQ9BRR6 497 aa10.23□□□□□ -0.77
NIP7-202ENST00000254941 CELF4Q9BZC1 486 aaKnown RBP10.23□□□□□ -0.77
NIP7-202ENST00000254941 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.23□□□□□ -0.774e-6■■■■□ 24.6
NIP7-202ENST00000254941 RAB20Q9NX57 234 aa10.23□□□□□ -0.77
NIP7-202ENST00000254941 PTPRJQ12913 1337 aa10.23□□□□□ -0.77
NIP7-202ENST00000254941 USP27XA6NNY8 438 aa10.23□□□□□ -0.77
NIP7-202ENST00000254941 LRRN2O75325 713 aa10.23□□□□□ -0.77
NIP7-202ENST00000254941 CLTAP09496 248 aa10.23□□□□□ -0.77
NIP7-202ENST00000254941 FGFR4P22455 802 aa10.23□□□□□ -0.77
NIP7-202ENST00000254941 AXLP30530 894 aa10.23□□□□□ -0.77
NIP7-202ENST00000254941 MRPS6P82932 125 aaKnown RBP10.23□□□□□ -0.77
NIP7-202ENST00000254941 PTGISQ16647 500 aa10.23□□□□□ -0.77
NIP7-202ENST00000254941 HGSNATQ68CP4 663 aa10.23□□□□□ -0.77
NIP7-202ENST00000254941 NOTUMQ6P988 496 aa10.23□□□□□ -0.77
NIP7-202ENST00000254941 GJB7Q6PEY0 223 aa10.23□□□□□ -0.77
NIP7-202ENST00000254941 TOGARAM2Q6ZUX3 1019 aa10.23□□□□□ -0.77
NIP7-202ENST00000254941 WDR49Q8IV35 697 aa10.23□□□□□ -0.77
NIP7-202ENST00000254941 CCDC170Q8IYT3 715 aa10.23□□□□□ -0.77
NIP7-202ENST00000254941 DNAJC5GQ8N7S2 189 aa10.23□□□□□ -0.77
NIP7-202ENST00000254941 VTI1AQ96AJ9 217 aa10.23□□□□□ -0.77
NIP7-202ENST00000254941 STK33Q9BYT3 514 aa10.23□□□□□ -0.77
NIP7-202ENST00000254941 NHEJ1Q9H9Q4 299 aaPredicted RBP10.23□□□□□ -0.77
NIP7-202ENST00000254941 RPF1Q9H9Y2 349 aaKnown RBP10.23□□□□□ -0.77
NIP7-202ENST00000254941 ARHGAP20Q9P2F6 1191 aa10.23□□□□□ -0.77
NIP7-202ENST00000254941 DNAJC12Q9UKB3 198 aa10.23□□□□□ -0.77
NIP7-202ENST00000254941 AJAP1Q9UKB5 411 aaPredicted RBP10.23□□□□□ -0.77
NIP7-202ENST00000254941 PPP2R2CQ9Y2T4 447 aa10.23□□□□□ -0.77
NIP7-202ENST00000254941 EPN1Q9Y6I3 576 aaPredicted RBP10.23□□□□□ -0.77
NIP7-202ENST00000254941 M0QZ92 97 aa10.22□□□□□ -0.77
NIP7-202ENST00000254941 TULP1O00294 542 aaPredicted RBP10.22□□□□□ -0.77
NIP7-202ENST00000254941 CCP110O43303 1012 aa10.22□□□□□ -0.77
NIP7-202ENST00000254941 B4GALT4O60513 344 aa10.22□□□□□ -0.77
NIP7-202ENST00000254941 ZC3H11AO75152 810 aaKnown RBP eCLIP10.22□□□□□ -0.77
NIP7-202ENST00000254941 IL18RAPO95256 599 aa10.22□□□□□ -0.77
NIP7-202ENST00000254941 NDUFA10O95299 355 aa10.22□□□□□ -0.77
NIP7-202ENST00000254941 STAG3L1P0CL83 205 aa10.22□□□□□ -0.77
NIP7-202ENST00000254941 CLCN1P35523 988 aa10.22□□□□□ -0.77
NIP7-202ENST00000254941 OSTNP61366 133 aa10.22□□□□□ -0.77
NIP7-202ENST00000254941 RAPGEF1Q13905 1077 aa10.22□□□□□ -0.77
NIP7-202ENST00000254941 DCAF4L1Q3SXM0 396 aa10.22□□□□□ -0.77
NIP7-202ENST00000254941 SLC9C1Q4G0N8 1177 aa10.22□□□□□ -0.77
NIP7-202ENST00000254941 TDRD10Q5VZ19 366 aaKnown RBP10.22□□□□□ -0.77
NIP7-202ENST00000254941 LMBRD2Q68DH5 695 aaPredicted RBP10.22□□□□□ -0.77
NIP7-202ENST00000254941 SLC27A1Q6PCB7 646 aa10.22□□□□□ -0.77
NIP7-202ENST00000254941 IRF2BP2Q7Z5L9 587 aa10.22□□□□□ -0.77
NIP7-202ENST00000254941 APBB1IPQ7Z5R6 666 aaPredicted RBP10.22□□□□□ -0.77
NIP7-202ENST00000254941 TMEM192Q8IY95 271 aa10.22□□□□□ -0.77
NIP7-202ENST00000254941 OR5B17Q8NGF7 314 aa10.22□□□□□ -0.77
NIP7-202ENST00000254941 WNT8BQ93098 351 aa10.22□□□□□ -0.77
NIP7-202ENST00000254941 PAK6Q9NQU5 681 aaPredicted RBP10.22□□□□□ -0.77
NIP7-202ENST00000254941 TRMT1Q9NXH9 659 aaKnown RBP10.22□□□□□ -0.77
NIP7-202ENST00000254941 ADGRG1Q9Y653 693 aa10.22□□□□□ -0.77
NIP7-202ENST00000254941 MKI67P46013 3256 aaKnown RBP10.22□□□□□ -0.77
NIP7-202ENST00000254941 A0A1W2PQ45 241 aaPredicted RBP10.21□□□□□ -0.77
NIP7-202ENST00000254941 A0A1W2PQY0 241 aa10.21□□□□□ -0.77
NIP7-202ENST00000254941 SSU72P8A0A1W2PR75 194 aa10.21□□□□□ -0.77
NIP7-202ENST00000254941 F8VZ95 297 aa10.21□□□□□ -0.77
NIP7-202ENST00000254941 ZSCAN12O43309 604 aa10.21□□□□□ -0.77
NIP7-202ENST00000254941 SERPING1P05155 500 aa10.21□□□□□ -0.77
NIP7-202ENST00000254941 PLEKP08567 350 aaPredicted RBP10.21□□□□□ -0.77
NIP7-202ENST00000254941 CCDC175P0C221 793 aa10.21□□□□□ -0.77
NIP7-202ENST00000254941 CXCL8P10145 99 aa10.21□□□□□ -0.77
NIP7-202ENST00000254941 DRAP1Q14919 205 aaPredicted RBP10.21□□□□□ -0.77
NIP7-202ENST00000254941 DUOXA2Q1HG44 320 aa10.21□□□□□ -0.77
NIP7-202ENST00000254941 FMNL3Q8IVF7 1028 aa10.21□□□□□ -0.77
NIP7-202ENST00000254941 SLC43A3Q8NBI5 491 aa10.21□□□□□ -0.77
NIP7-202ENST00000254941 FAM212AQ96EL1 285 aa10.21□□□□□ -0.77
NIP7-202ENST00000254941 FAM84AQ96KN4 292 aa10.21□□□□□ -0.77
NIP7-202ENST00000254941 PPP1R13BQ96KQ4 1090 aa10.21□□□□□ -0.77
NIP7-202ENST00000254941 DESI2Q9BSY9 194 aa10.21□□□□□ -0.77
NIP7-202ENST00000254941 GPR88Q9GZN0 384 aa10.21□□□□□ -0.77
NIP7-202ENST00000254941 SENP6Q9GZR1 1112 aaPredicted RBP10.21□□□□□ -0.77
NIP7-202ENST00000254941 UNC93B1Q9H1C4 597 aa10.21□□□□□ -0.77
NIP7-202ENST00000254941 UBE2TQ9NPD8 197 aaPredicted RBP10.21□□□□□ -0.77
NIP7-202ENST00000254941 TRPV2Q9Y5S1 764 aa10.21□□□□□ -0.77
NIP7-202ENST00000254941 CDY2AQ9Y6F7 541 aa10.21□□□□□ -0.77
NIP7-202ENST00000254941 MYH10P35580 1976 aa10.21□□□□□ -0.77
NIP7-202ENST00000254941 MEFVO15553 781 aaPredicted RBP10.21□□□□□ -0.78
NIP7-202ENST00000254941 VNN1O95497 513 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms