RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 CXCL16Q9H2A7 254 aa9.86□□□□□ -0.83
RPA1-201ENST00000254719 TMOD4Q9NZQ9 345 aa9.86□□□□□ -0.83
RPA1-201ENST00000254719 CTTNBP2NLQ9P2B4 639 aa9.86□□□□□ -0.83
RPA1-201ENST00000254719 FEM1BQ9UK73 627 aa9.86□□□□□ -0.83
RPA1-201ENST00000254719 ZNRF3Q9ULT6 936 aa9.86□□□□□ -0.83
RPA1-201ENST00000254719 DIS3Q9Y2L1 958 aaKnown RBP9.86□□□□□ -0.83
RPA1-201ENST00000254719 IKBKGQ9Y6K9 419 aa9.86□□□□□ -0.83
RPA1-201ENST00000254719 SYNGAP1Q96PV0 1343 aa9.86□□□□□ -0.83
RPA1-201ENST00000254719 SCN1AP35498 2009 aa9.86□□□□□ -0.83
RPA1-201ENST00000254719 KIAA0391O15091 583 aaKnown RBP9.86□□□□□ -0.83
RPA1-201ENST00000254719 RPSAP08865 295 aaKnown RBP9.86□□□□□ -0.83
RPA1-201ENST00000254719 ATP2A2P16615 1042 aaKnown RBP9.86□□□□□ -0.83
RPA1-201ENST00000254719 KLF1Q13351 362 aaPredicted RBP9.86□□□□□ -0.83
RPA1-201ENST00000254719 ABHD15Q6UXT9 468 aa9.86□□□□□ -0.83
RPA1-201ENST00000254719 MIER3Q7Z3K6 550 aa9.86□□□□□ -0.83
RPA1-201ENST00000254719 C18orf8Q96DM3 657 aa9.86□□□□□ -0.83
RPA1-201ENST00000254719 TMEM253P0C7T8 217 aa9.86□□□□□ -0.83
RPA1-201ENST00000254719 CETPP11597 493 aa9.86□□□□□ -0.83
RPA1-201ENST00000254719 YWHABP31946 246 aaKnown RBP9.86□□□□□ -0.83
RPA1-201ENST00000254719 STRN3Q13033 797 aa9.86□□□□□ -0.83
RPA1-201ENST00000254719 ZNF211Q13398 564 aaPredicted RBP9.86□□□□□ -0.83
RPA1-201ENST00000254719 MTMR2Q13614 643 aa9.86□□□□□ -0.83
RPA1-201ENST00000254719 PPP2R5AQ15172 486 aa9.86□□□□□ -0.83
RPA1-201ENST00000254719 CYP1B1Q16678 543 aa9.86□□□□□ -0.83
RPA1-201ENST00000254719 FAM182AQ5T1J6 154 aa9.86□□□□□ -0.83
RPA1-201ENST00000254719 TAS1R2Q8TE23 839 aa9.86□□□□□ -0.83
RPA1-201ENST00000254719 ATG4CQ96DT6 458 aa9.86□□□□□ -0.83
RPA1-201ENST00000254719 WDR83Q9BRX9 315 aaKnown RBP9.86□□□□□ -0.83
RPA1-201ENST00000254719 TMEM206Q9H813 350 aa9.86□□□□□ -0.83
RPA1-201ENST00000254719 HSPBP1Q9NZL4 362 aa9.86□□□□□ -0.83
RPA1-201ENST00000254719 INTUQ9ULD6 942 aa9.86□□□□□ -0.83
RPA1-201ENST00000254719 CNMDO75829 334 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 PLS3P13797 630 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 GCAP28676 217 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 CYP2J2P51589 502 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 C2CD6Q53TS8 623 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 WDR78Q5VTH9 848 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 MAP4K3Q8IVH8 894 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 CCDC50Q8IVM0 306 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 C4orf19Q8IY42 314 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 TRPM4Q8TD43 1214 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 TLCD1Q96CP7 247 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 TMBIM4Q9HC24 238 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 FAM114A2Q9NRY5 505 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 KCND2Q9NZV8 630 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 PKD2L1Q9P0L9 805 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 UBE4BO95155 1302 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 DAPK3O43293 454 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 HNRNPH1P31943 449 aaKnown RBP9.85□□□□□ -0.83
RPA1-201ENST00000254719 DSG3P32926 999 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 MAN1A1P33908 653 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 GCLMP48507 274 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 BPIFB4P59827 614 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 ODR4Q5SWX8 454 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 ARFGAP1Q8N6T3 406 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 TTLL6Q8N841 843 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 GLIS1Q8NBF1 620 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 NEK9Q8TD19 979 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 WHAMMQ8TF30 809 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 ZBTB10Q96DT7 871 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 PAGR1Q9BTK6 254 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 NUMBLQ9Y6R0 609 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 RALGAPA2Q2PPJ7 1873 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 CCDC188H7C350 402 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 HGSO14964 777 aaPredicted RBP9.85□□□□□ -0.83
RPA1-201ENST00000254719 GAS8O95995 478 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 PTPRAP18433 802 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 PSEN1P49768 467 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 PTENP60484 403 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 NNTQ13423 1086 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 WDTC1Q8N5D0 677 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.85□□□□□ -0.834e-7■■■■■ 58.1
RPA1-201ENST00000254719 AS3MTQ9HBK9 375 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 SEL1LQ9UBV2 794 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 PPP1R1BQ9UD71 204 aaPredicted RBP9.85□□□□□ -0.83
RPA1-201ENST00000254719 GJD2Q9UKL4 321 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 FAM169AQ9Y6X4 670 aa9.85□□□□□ -0.83
RPA1-201ENST00000254719 KCNK3O14649 394 aa9.84□□□□□ -0.83
RPA1-201ENST00000254719 PPFIA2O75334 1257 aa9.84□□□□□ -0.83
RPA1-201ENST00000254719 CREB1P16220 341 aa9.84□□□□□ -0.83
RPA1-201ENST00000254719 MAP2K2P36507 400 aa9.84□□□□□ -0.83
RPA1-201ENST00000254719 SEC24CP53992 1094 aa9.84□□□□□ -0.83
RPA1-201ENST00000254719 CORO7P57737 925 aa9.84□□□□□ -0.83
RPA1-201ENST00000254719 YWHAEP62258 255 aaKnown RBP9.84□□□□□ -0.83
RPA1-201ENST00000254719 GUCY1A3Q02108 690 aa9.84□□□□□ -0.83
RPA1-201ENST00000254719 TARBP2Q15633 366 aaKnown RBP9.84□□□□□ -0.83
RPA1-201ENST00000254719 TADA2BQ86TJ2 420 aa9.84□□□□□ -0.83
RPA1-201ENST00000254719 LARGE2Q8N3Y3 721 aa9.84□□□□□ -0.83
RPA1-201ENST00000254719 SCLT1Q96NL6 688 aa9.84□□□□□ -0.83
RPA1-201ENST00000254719 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.84□□□□□ -0.835e-6■■■□□ 16.3
RPA1-201ENST00000254719 PI4K2AQ9BTU6 479 aa9.84□□□□□ -0.83
RPA1-201ENST00000254719 PICK1Q9NRD5 415 aa9.84□□□□□ -0.83
RPA1-201ENST00000254719 SUFUQ9UMX1 484 aa9.84□□□□□ -0.83
RPA1-201ENST00000254719 ALG6Q9Y672 507 aa9.84□□□□□ -0.83
RPA1-201ENST00000254719 SLC16A4O15374 487 aa9.84□□□□□ -0.83
RPA1-201ENST00000254719 C4BPAP04003 597 aaKnown RBP9.84□□□□□ -0.83
RPA1-201ENST00000254719 SNX16P57768 344 aa9.84□□□□□ -0.83
RPA1-201ENST00000254719 MPP2Q14168 576 aa9.84□□□□□ -0.83
RPA1-201ENST00000254719 MAMDC4Q6UXC1 1216 aa9.84□□□□□ -0.83
RPA1-201ENST00000254719 DAAM2Q86T65 1068 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms