RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 BHMTQ93088 406 aa19.75■□□□□ 0.75
SMARCC1-201ENST00000254480 EPB41L4AQ9HCS5 686 aaPredicted RBP19.75■□□□□ 0.75
SMARCC1-201ENST00000254480 NFKBIAP25963 317 aa19.75■□□□□ 0.75
SMARCC1-201ENST00000254480 ANO9A1A5B4 782 aa19.74■□□□□ 0.75
SMARCC1-201ENST00000254480 APRTP07741 180 aa19.74■□□□□ 0.75
SMARCC1-201ENST00000254480 HSPA8P11142 646 aaKnown RBP19.74■□□□□ 0.75
SMARCC1-201ENST00000254480 GUCY1A3Q02108 690 aa19.74■□□□□ 0.75
SMARCC1-201ENST00000254480 SMTNL2Q2TAL5 461 aa19.74■□□□□ 0.75
SMARCC1-201ENST00000254480 FRMD5Q7Z6J6 570 aa19.74■□□□□ 0.75
SMARCC1-201ENST00000254480 UBA3Q8TBC4 463 aa19.74■□□□□ 0.75
SMARCC1-201ENST00000254480 GOLPH3Q9H4A6 298 aa19.74■□□□□ 0.75
SMARCC1-201ENST00000254480 TADA2AO75478 443 aa19.74■□□□□ 0.75
SMARCC1-201ENST00000254480 SERPIND1P05546 499 aa19.74■□□□□ 0.75
SMARCC1-201ENST00000254480 HOXD10P28358 340 aa19.74■□□□□ 0.75
SMARCC1-201ENST00000254480 ZNF280CQ8ND82 737 aa19.74■□□□□ 0.75
SMARCC1-201ENST00000254480 SCHIP1Q9P0W5 487 aaPredicted RBP19.74■□□□□ 0.75
SMARCC1-201ENST00000254480 HAUS5O94927 633 aa19.74■□□□□ 0.75
SMARCC1-201ENST00000254480 HOXA7P31268 230 aaPredicted RBP19.74■□□□□ 0.75
SMARCC1-201ENST00000254480 ACSF2Q96CM8 615 aaPredicted RBP19.74■□□□□ 0.75
SMARCC1-201ENST00000254480 SEPT5Q99719 369 aaPredicted RBP19.74■□□□□ 0.75
SMARCC1-201ENST00000254480 POLR3CQ9BUI4 534 aaPredicted RBP19.74■□□□□ 0.75
SMARCC1-201ENST00000254480 MAGEB5Q9BZ81 275 aa19.74■□□□□ 0.75
SMARCC1-201ENST00000254480 DONSONQ9NYP3 566 aa19.74■□□□□ 0.75
SMARCC1-201ENST00000254480 ZC3H4Q9UPT8 1303 aaKnown RBP19.74■□□□□ 0.75
SMARCC1-201ENST00000254480 F8W8V4 182 aa19.74■□□□□ 0.75
SMARCC1-201ENST00000254480 KCNA2P16389 499 aa19.74■□□□□ 0.75
SMARCC1-201ENST00000254480 GJB7Q6PEY0 223 aa19.74■□□□□ 0.75
SMARCC1-201ENST00000254480 CDKL3Q8IVW4 592 aaPredicted RBP19.74■□□□□ 0.75
SMARCC1-201ENST00000254480 APPL2Q8NEU8 664 aa19.74■□□□□ 0.75
SMARCC1-201ENST00000254480 CEP19Q96LK0 163 aa19.74■□□□□ 0.75
SMARCC1-201ENST00000254480 TUFT1Q9NNX1 390 aa19.74■□□□□ 0.75
SMARCC1-201ENST00000254480 WARS2Q9UGM6 360 aaKnown RBP19.74■□□□□ 0.75
SMARCC1-201ENST00000254480 GLI2P10070 1586 aa19.74■□□□□ 0.75
SMARCC1-201ENST00000254480 CLTCL1P53675 1640 aa19.74■□□□□ 0.75
SMARCC1-201ENST00000254480 LRRC7Q96NW7 1537 aa19.74■□□□□ 0.75
SMARCC1-201ENST00000254480 ASMTLO95671 621 aa19.74■□□□□ 0.75
SMARCC1-201ENST00000254480 ARFIP2P53365 341 aa19.74■□□□□ 0.75
SMARCC1-201ENST00000254480 CDK17Q00537 523 aa19.74■□□□□ 0.75
SMARCC1-201ENST00000254480 NCOA4Q13772 614 aa19.74■□□□□ 0.75
SMARCC1-201ENST00000254480 RPAINQ86UA6 219 aa19.74■□□□□ 0.75
SMARCC1-201ENST00000254480 FGFR1OP2Q9NVK5 253 aa19.74■□□□□ 0.75
SMARCC1-201ENST00000254480 CAMTA2O94983 1202 aa19.73■□□□□ 0.75
SMARCC1-201ENST00000254480 ACTN3Q08043 901 aaPredicted RBP19.73■□□□□ 0.75
SMARCC1-201ENST00000254480 SNRNP35Q16560 246 aaKnown RBP19.73■□□□□ 0.75
SMARCC1-201ENST00000254480 TMEM60Q9H2L4 133 aa19.73■□□□□ 0.75
SMARCC1-201ENST00000254480 ATXN3P54252 364 aaPredicted RBP19.73■□□□□ 0.75
SMARCC1-201ENST00000254480 FSCBQ5H9T9 825 aa19.73■□□□□ 0.75
SMARCC1-201ENST00000254480 STRIP1Q5VSL9 837 aa19.73■□□□□ 0.75
SMARCC1-201ENST00000254480 C18orf8Q96DM3 657 aa19.73■□□□□ 0.75
SMARCC1-201ENST00000254480 DDX56Q9NY93 547 aaKnown RBP19.73■□□□□ 0.75
SMARCC1-201ENST00000254480 FHOD1Q9Y613 1164 aa19.73■□□□□ 0.75
SMARCC1-201ENST00000254480 PLEKHG2Q9H7P9 1386 aa19.73■□□□□ 0.75
SMARCC1-201ENST00000254480 PDGFRAP16234 1089 aa19.73■□□□□ 0.75
SMARCC1-201ENST00000254480 SLC9A1P19634 815 aa19.73■□□□□ 0.75
SMARCC1-201ENST00000254480 TEX13BQ9BXU2 312 aa19.73■□□□□ 0.75
SMARCC1-201ENST00000254480 SYNDIG1Q9H7V2 258 aa19.73■□□□□ 0.75
SMARCC1-201ENST00000254480 EFTUD2Q15029 972 aaKnown RBP eCLIP19.73■□□□□ 0.752e-7■■■■□ 22.1
SMARCC1-201ENST00000254480 TBCCQ15814 346 aa19.73■□□□□ 0.75
SMARCC1-201ENST00000254480 AMHR2Q16671 573 aa19.73■□□□□ 0.75
SMARCC1-201ENST00000254480 LRRC37BQ96QE4 947 aa19.73■□□□□ 0.75
SMARCC1-201ENST00000254480 HPS4Q9NQG7 708 aa19.73■□□□□ 0.75
SMARCC1-201ENST00000254480 RTN2O75298 545 aa19.73■□□□□ 0.75
SMARCC1-201ENST00000254480 NR3C2P08235 984 aa19.73■□□□□ 0.75
SMARCC1-201ENST00000254480 PDHBP11177 359 aa19.73■□□□□ 0.75
SMARCC1-201ENST00000254480 RALAP11233 206 aa19.73■□□□□ 0.75
SMARCC1-201ENST00000254480 VEPH1Q14D04 833 aa19.73■□□□□ 0.75
SMARCC1-201ENST00000254480 P3H1Q32P28 736 aa19.73■□□□□ 0.75
SMARCC1-201ENST00000254480 SPATA4Q8NEY3 305 aa19.73■□□□□ 0.75
SMARCC1-201ENST00000254480 SLC26A7Q8TE54 656 aa19.73■□□□□ 0.75
SMARCC1-201ENST00000254480 PABPC5Q96DU9 382 aaKnown RBP19.73■□□□□ 0.75
SMARCC1-201ENST00000254480 ZNF560Q96MR9 790 aa19.73■□□□□ 0.75
SMARCC1-201ENST00000254480 TRIM15Q9C019 465 aa19.73■□□□□ 0.75
SMARCC1-201ENST00000254480 RCAN1P53805 252 aa19.72■□□□□ 0.75
SMARCC1-201ENST00000254480 PRKCEQ02156 737 aa19.72■□□□□ 0.75
SMARCC1-201ENST00000254480 MYBL1P10243 752 aa19.72■□□□□ 0.75
SMARCC1-201ENST00000254480 ALDH18A1P54886 795 aaKnown RBP19.72■□□□□ 0.75
SMARCC1-201ENST00000254480 TMEM132DQ14C87 1099 aa19.72■□□□□ 0.75
SMARCC1-201ENST00000254480 OTULINQ96BN8 352 aa19.72■□□□□ 0.75
SMARCC1-201ENST00000254480 FAM167BQ9BTA0 163 aa19.72■□□□□ 0.75
SMARCC1-201ENST00000254480 THEGQ9P2T0 379 aa19.72■□□□□ 0.75
SMARCC1-201ENST00000254480 GMNCA6NCL1 334 aa19.72■□□□□ 0.75
SMARCC1-201ENST00000254480 UBE2Q2LH0YL09 131 aa19.72■□□□□ 0.75
SMARCC1-201ENST00000254480 GALCP54803 685 aa19.72■□□□□ 0.75
SMARCC1-201ENST00000254480 NPEPPSP55786 919 aa19.72■□□□□ 0.75
SMARCC1-201ENST00000254480 LONRF1Q17RB8 773 aa19.72■□□□□ 0.75
SMARCC1-201ENST00000254480 ITPRIPL1Q6GPH6 555 aa19.72■□□□□ 0.75
SMARCC1-201ENST00000254480 SH2D3CQ8N5H7 860 aa19.72■□□□□ 0.75
SMARCC1-201ENST00000254480 UNC45AQ9H3U1 944 aa19.72■□□□□ 0.75
SMARCC1-201ENST00000254480 ECT2Q9H8V3 914 aa19.72■□□□□ 0.75
SMARCC1-201ENST00000254480 APEX2Q9UBZ4 518 aa19.72■□□□□ 0.75
SMARCC1-201ENST00000254480 MARCOQ9UEW3 520 aaPredicted RBP19.72■□□□□ 0.75
SMARCC1-201ENST00000254480 ALKQ9UM73 1620 aa19.72■□□□□ 0.75
SMARCC1-201ENST00000254480 ORC1Q13415 861 aa19.72■□□□□ 0.75
SMARCC1-201ENST00000254480 EMC2Q15006 297 aa19.72■□□□□ 0.75
SMARCC1-201ENST00000254480 HIF1AQ16665 826 aa19.72■□□□□ 0.75
SMARCC1-201ENST00000254480 PRMT1Q99873 361 aaKnown RBP19.72■□□□□ 0.75
SMARCC1-201ENST00000254480 ING2Q9H160 280 aa19.72■□□□□ 0.75
SMARCC1-201ENST00000254480 FARP1Q9Y4F1 1045 aaPredicted RBP19.72■□□□□ 0.75
SMARCC1-201ENST00000254480 STXBP3O00186 592 aa19.72■□□□□ 0.75
SMARCC1-201ENST00000254480 PDXKO00764 312 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms