RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 CCDC65Q8IXS2 484 aa19.45■□□□□ 0.7
PTPN12-201ENST00000248594 PIP4K2CQ8TBX8 421 aa19.45■□□□□ 0.7
PTPN12-201ENST00000248594 NAT14Q8WUY8 206 aa19.45■□□□□ 0.7
PTPN12-201ENST00000248594 LENG1Q96BZ8 264 aaPredicted RBP19.45■□□□□ 0.7
PTPN12-201ENST00000248594 SLC4A9Q96Q91 983 aa19.45■□□□□ 0.7
PTPN12-201ENST00000248594 ROPN1BQ9BZX4 212 aaPredicted RBP19.45■□□□□ 0.7
PTPN12-201ENST00000248594 ROPN1Q9HAT0 212 aaPredicted RBP19.45■□□□□ 0.7
PTPN12-201ENST00000248594 TMCO1Q9UM00 188 aa19.45■□□□□ 0.7
PTPN12-201ENST00000248594 CYTH3O43739 400 aa19.45■□□□□ 0.7
PTPN12-201ENST00000248594 TROVE2P10155 538 aaKnown RBP eCLIP19.45■□□□□ 0.7
PTPN12-201ENST00000248594 YARSP54577 528 aaKnown RBP19.45■□□□□ 0.7
PTPN12-201ENST00000248594 ADARP55265 1226 aaKnown RBP19.45■□□□□ 0.7
PTPN12-201ENST00000248594 DSG1Q02413 1049 aa19.45■□□□□ 0.7
PTPN12-201ENST00000248594 PKN2Q16513 984 aaKnown RBP19.45■□□□□ 0.7
PTPN12-201ENST00000248594 OTOAQ7RTW8 1153 aa19.45■□□□□ 0.7
PTPN12-201ENST00000248594 NUMBLQ9Y6R0 609 aa19.45■□□□□ 0.7
PTPN12-201ENST00000248594 B2RBV5 119 aa19.45■□□□□ 0.7
PTPN12-201ENST00000248594 KLRF2D3W0D1 207 aa19.45■□□□□ 0.7
PTPN12-201ENST00000248594 TTC4O95801 387 aa19.45■□□□□ 0.7
PTPN12-201ENST00000248594 AP1B1Q10567 949 aa19.45■□□□□ 0.7
PTPN12-201ENST00000248594 PDE1CQ14123 709 aaPredicted RBP19.45■□□□□ 0.7
PTPN12-201ENST00000248594 C1orf146Q5VVC0 180 aa19.45■□□□□ 0.7
PTPN12-201ENST00000248594 LVRNQ6Q4G3 990 aa19.45■□□□□ 0.7
PTPN12-201ENST00000248594 BRINP3Q76B58 766 aa19.45■□□□□ 0.7
PTPN12-201ENST00000248594 CLNKQ7Z7G1 428 aa19.45■□□□□ 0.7
PTPN12-201ENST00000248594 C6orf50Q9HD87 102 aa19.45■□□□□ 0.7
PTPN12-201ENST00000248594 PAIP2BQ9ULR5 123 aaKnown RBP19.45■□□□□ 0.7
PTPN12-201ENST00000248594 POLD1P28340 1107 aa19.44■□□□□ 0.7
PTPN12-201ENST00000248594 OCRLQ01968 901 aa19.44■□□□□ 0.7
PTPN12-201ENST00000248594 SLC1A5Q15758 541 aa19.44■□□□□ 0.7
PTPN12-201ENST00000248594 SH2D4BQ5SQS7 431 aa19.44■□□□□ 0.7
PTPN12-201ENST00000248594 SMC1BQ8NDV3 1235 aa19.44■□□□□ 0.7
PTPN12-201ENST00000248594 MAML1Q92585 1016 aa19.44■□□□□ 0.7
PTPN12-201ENST00000248594 IWS1Q96ST2 819 aa19.44■□□□□ 0.7
PTPN12-201ENST00000248594 BTBD10Q9BSF8 475 aa19.44■□□□□ 0.7
PTPN12-201ENST00000248594 NINJ2Q9NZG7 142 aa19.44■□□□□ 0.7
PTPN12-201ENST00000248594 PPP2R5EQ16537 467 aa19.44■□□□□ 0.7
PTPN12-201ENST00000248594 TRIM67Q6ZTA4 783 aa19.44■□□□□ 0.7
PTPN12-201ENST00000248594 SCFD1Q8WVM8 642 aa19.44■□□□□ 0.7
PTPN12-201ENST00000248594 DNAJC12Q9UKB3 198 aa19.44■□□□□ 0.7
PTPN12-201ENST00000248594 POTEB3A0JP26 581 aa19.44■□□□□ 0.7
PTPN12-201ENST00000248594 SIGLEC16A6NMB1 481 aa19.44■□□□□ 0.7
PTPN12-201ENST00000248594 POTECB2RU33 542 aa19.44■□□□□ 0.7
PTPN12-201ENST00000248594 ATF2P15336 505 aa19.44■□□□□ 0.7
PTPN12-201ENST00000248594 CHRNDQ07001 517 aa19.44■□□□□ 0.7
PTPN12-201ENST00000248594 R3HDM1Q15032 1099 aaKnown RBP19.44■□□□□ 0.7
PTPN12-201ENST00000248594 C6orf163Q5TEZ5 329 aa19.44■□□□□ 0.7
PTPN12-201ENST00000248594 LPCAT4Q643R3 524 aa19.44■□□□□ 0.7
PTPN12-201ENST00000248594 POTEBQ6S5H4 581 aa19.44■□□□□ 0.7
PTPN12-201ENST00000248594 RGS9BPQ6ZS82 235 aa19.44■□□□□ 0.7
PTPN12-201ENST00000248594 REXO1Q8N1G1 1221 aaKnown RBP19.44■□□□□ 0.7
PTPN12-201ENST00000248594 RAB34Q9BZG1 259 aa19.44■□□□□ 0.7
PTPN12-201ENST00000248594 ACP6Q9NPH0 428 aa19.44■□□□□ 0.7
PTPN12-201ENST00000248594 CDH16O75309 829 aa19.43■□□□□ 0.7
PTPN12-201ENST00000248594 CIB2O75838 187 aa19.43■□□□□ 0.7
PTPN12-201ENST00000248594 FTLP02792 175 aaPredicted RBP19.43■□□□□ 0.7
PTPN12-201ENST00000248594 TRIM49P0CI25 452 aa19.43■□□□□ 0.7
PTPN12-201ENST00000248594 TRIM49CP0CI26 452 aa19.43■□□□□ 0.7
PTPN12-201ENST00000248594 TSPY3P0CV98 308 aa19.43■□□□□ 0.7
PTPN12-201ENST00000248594 TSPY8P0CW00 308 aa19.43■□□□□ 0.7
PTPN12-201ENST00000248594 VCAM1P19320 739 aa19.43■□□□□ 0.7
PTPN12-201ENST00000248594 LSAMPQ13449 338 aa19.43■□□□□ 0.7
PTPN12-201ENST00000248594 SLC44A4Q53GD3 710 aa19.43■□□□□ 0.7
PTPN12-201ENST00000248594 MFSD5Q6N075 450 aa19.43■□□□□ 0.7
PTPN12-201ENST00000248594 CCDC174Q6PII3 467 aa19.43■□□□□ 0.7
PTPN12-201ENST00000248594 TRMT10CQ7L0Y3 403 aaKnown RBP19.43■□□□□ 0.7
PTPN12-201ENST00000248594 KRT25Q7Z3Z0 450 aa19.43■□□□□ 0.7
PTPN12-201ENST00000248594 SLFN11Q7Z7L1 901 aa19.43■□□□□ 0.7
PTPN12-201ENST00000248594 SLC20A1Q8WUM9 679 aa19.43■□□□□ 0.7
PTPN12-201ENST00000248594 PYDC1Q8WXC3 89 aa19.43■□□□□ 0.7
PTPN12-201ENST00000248594 PALM3A6NDB9 673 aaPredicted RBP19.43■□□□□ 0.7
PTPN12-201ENST00000248594 GOLGA8SH3BPF8 625 aa19.43■□□□□ 0.7
PTPN12-201ENST00000248594 GOLGA8MH3BSY2 632 aa19.43■□□□□ 0.7
PTPN12-201ENST00000248594 CSF1RP07333 972 aa19.43■□□□□ 0.7
PTPN12-201ENST00000248594 KITP10721 976 aa19.43■□□□□ 0.7
PTPN12-201ENST00000248594 CCR3P51677 355 aa19.43■□□□□ 0.7
PTPN12-201ENST00000248594 HIRAP54198 1017 aaPredicted RBP19.43■□□□□ 0.7
PTPN12-201ENST00000248594 PABPC4Q13310 644 aaKnown RBP eCLIP19.43■□□□□ 0.7
PTPN12-201ENST00000248594 UBE2SQ16763 222 aa19.43■□□□□ 0.7
PTPN12-201ENST00000248594 GRAMD1BQ3KR37 738 aa19.43■□□□□ 0.7
PTPN12-201ENST00000248594 PROM2Q8N271 834 aa19.43■□□□□ 0.7
PTPN12-201ENST00000248594 NME8Q8N427 588 aa19.43■□□□□ 0.7
PTPN12-201ENST00000248594 SHCBP1LQ9BZQ2 653 aa19.43■□□□□ 0.7
PTPN12-201ENST00000248594 SAYSD1Q9NPB0 183 aa19.43■□□□□ 0.7
PTPN12-201ENST00000248594 TRAF3IP3Q9Y228 551 aa19.43■□□□□ 0.7
PTPN12-201ENST00000248594 ZNF510Q9Y2H8 683 aa19.43■□□□□ 0.7
PTPN12-201ENST00000248594 PCDH11YQ9BZA8 1340 aa19.43■□□□□ 0.7
PTPN12-201ENST00000248594 MYOCOSA0A1B0GUC4 107 aa19.42■□□□□ 0.7
PTPN12-201ENST00000248594 DKC1O60832 514 aaKnown RBP eCLIP19.42■□□□□ 0.7
PTPN12-201ENST00000248594 TRPA1O75762 1119 aa19.42■□□□□ 0.7
PTPN12-201ENST00000248594 ZBTB48P10074 688 aaPredicted RBP19.42■□□□□ 0.7
PTPN12-201ENST00000248594 PLS3P13797 630 aa19.42■□□□□ 0.7
PTPN12-201ENST00000248594 EPHB1P54762 984 aa19.42■□□□□ 0.7
PTPN12-201ENST00000248594 TTLL12Q14166 644 aaPredicted RBP19.42■□□□□ 0.7
PTPN12-201ENST00000248594 TRMT1LQ7Z2T5 733 aaKnown RBP19.42■□□□□ 0.7
PTPN12-201ENST00000248594 VGLL2Q8N8G2 317 aa19.42■□□□□ 0.7
PTPN12-201ENST00000248594 HSPBAP1Q96EW2 488 aa19.42■□□□□ 0.7
PTPN12-201ENST00000248594 AAASQ9NRG9 546 aa19.42■□□□□ 0.7
PTPN12-201ENST00000248594 CHST7Q9NS84 486 aa19.42■□□□□ 0.7
PTPN12-201ENST00000248594 ZNF180Q9UJW8 692 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms