RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 KCTD17Q8N5Z5 321 aa13.48□□□□□ -0.25
RAB3IP-201ENST00000247833 TMEM143Q96AN5 459 aa13.48□□□□□ -0.25
RAB3IP-201ENST00000247833 CHST7Q9NS84 486 aa13.48□□□□□ -0.25
RAB3IP-201ENST00000247833 CDR2Q01850 454 aa13.47□□□□□ -0.25
RAB3IP-201ENST00000247833 MTM1Q13496 603 aa13.47□□□□□ -0.25
RAB3IP-201ENST00000247833 SNRNP48Q6IEG0 339 aaKnown RBP13.47□□□□□ -0.25
RAB3IP-201ENST00000247833 CHADLQ6NUI6 762 aa13.47□□□□□ -0.25
RAB3IP-201ENST00000247833 C11orf63Q6NUN7 778 aa13.47□□□□□ -0.25
RAB3IP-201ENST00000247833 TBC1D1Q86TI0 1168 aaPredicted RBP13.47□□□□□ -0.25
RAB3IP-201ENST00000247833 PRUNE1Q86TP1 453 aa13.47□□□□□ -0.25
RAB3IP-201ENST00000247833 SLC9A9Q8IVB4 645 aa13.47□□□□□ -0.25
RAB3IP-201ENST00000247833 SRRM1Q8IYB3 904 aaKnown RBP13.47□□□□□ -0.25
RAB3IP-201ENST00000247833 EIF1ADQ8N9N8 165 aaKnown RBP13.47□□□□□ -0.25
RAB3IP-201ENST00000247833 RUNDC3BQ96NL0 473 aa13.47□□□□□ -0.25
RAB3IP-201ENST00000247833 TMEM8AQ9HCN3 771 aa13.47□□□□□ -0.25
RAB3IP-201ENST00000247833 KLC4Q9NSK0 619 aa13.47□□□□□ -0.25
RAB3IP-201ENST00000247833 PCDHA10Q9Y5I2 948 aa13.47□□□□□ -0.25
RAB3IP-201ENST00000247833 ASTN2O75129 1339 aaPredicted RBP13.47□□□□□ -0.25
RAB3IP-201ENST00000247833 POC1B-GALNT4F8VUJ3 575 aa13.47□□□□□ -0.25
RAB3IP-201ENST00000247833 CHRNB2P17787 502 aa13.47□□□□□ -0.25
RAB3IP-201ENST00000247833 STX2P32856 288 aa13.47□□□□□ -0.25
RAB3IP-201ENST00000247833 LMO3Q8TAP4 145 aa13.47□□□□□ -0.25
RAB3IP-201ENST00000247833 DEPTORQ8TB45 409 aa13.47□□□□□ -0.25
RAB3IP-201ENST00000247833 ATP6V0A1Q93050 837 aa13.47□□□□□ -0.25
RAB3IP-201ENST00000247833 IMPG2Q9BZV3 1241 aa13.47□□□□□ -0.25
RAB3IP-201ENST00000247833 CDC42EP4Q9H3Q1 356 aaKnown RBP13.47□□□□□ -0.25
RAB3IP-201ENST00000247833 SLC40A1Q9NP59 571 aa13.47□□□□□ -0.25
RAB3IP-201ENST00000247833 ADAM22Q9P0K1 906 aa13.47□□□□□ -0.25
RAB3IP-201ENST00000247833 CTNNAL1Q9UBT7 734 aa13.47□□□□□ -0.25
RAB3IP-201ENST00000247833 ZNF148Q9UQR1 794 aa13.47□□□□□ -0.25
RAB3IP-201ENST00000247833 JAK3P52333 1124 aa13.46□□□□□ -0.25
RAB3IP-201ENST00000247833 KRT76Q01546 638 aa13.46□□□□□ -0.25
RAB3IP-201ENST00000247833 DCUN1D2Q6PH85 259 aa13.46□□□□□ -0.25
RAB3IP-201ENST00000247833 SEPT14Q6ZU15 432 aa13.46□□□□□ -0.25
RAB3IP-201ENST00000247833 VTI1AQ96AJ9 217 aa13.46□□□□□ -0.25
RAB3IP-201ENST00000247833 AKT1S1Q96B36 256 aa13.46□□□□□ -0.25
RAB3IP-201ENST00000247833 ACSF2Q96CM8 615 aaPredicted RBP13.46□□□□□ -0.25
RAB3IP-201ENST00000247833 POLR3FQ9H1D9 316 aaPredicted RBP13.46□□□□□ -0.25
RAB3IP-201ENST00000247833 STK32BQ9NY57 414 aa13.46□□□□□ -0.25
RAB3IP-201ENST00000247833 PGM5Q15124 567 aa13.46□□□□□ -0.25
RAB3IP-201ENST00000247833 SPDYE2Q495Y8 402 aa13.46□□□□□ -0.25
RAB3IP-201ENST00000247833 EEPD1Q7L9B9 569 aa13.46□□□□□ -0.25
RAB3IP-201ENST00000247833 FAM71AQ8IYT1 594 aa13.46□□□□□ -0.25
RAB3IP-201ENST00000247833 GPD1LQ8N335 351 aa13.46□□□□□ -0.25
RAB3IP-201ENST00000247833 GIMAP7Q8NHV1 300 aa13.46□□□□□ -0.25
RAB3IP-201ENST00000247833 RPS6KC1Q96S38 1066 aa13.46□□□□□ -0.25
RAB3IP-201ENST00000247833 CCDC77Q9BR77 488 aa13.46□□□□□ -0.25
RAB3IP-201ENST00000247833 PDCD2LQ9BRP1 358 aa13.46□□□□□ -0.25
RAB3IP-201ENST00000247833 NKIRAS1Q9NYS0 192 aa13.46□□□□□ -0.25
RAB3IP-201ENST00000247833 STK38LQ9Y2H1 464 aa13.46□□□□□ -0.25
RAB3IP-201ENST00000247833 P4HA2O15460 535 aa13.46□□□□□ -0.26
RAB3IP-201ENST00000247833 CCNE2O96020 404 aa13.46□□□□□ -0.26
RAB3IP-201ENST00000247833 NR3C2P08235 984 aa13.46□□□□□ -0.26
RAB3IP-201ENST00000247833 ITGA8P53708 1063 aa13.46□□□□□ -0.26
RAB3IP-201ENST00000247833 TMED2Q15363 201 aa13.46□□□□□ -0.26
RAB3IP-201ENST00000247833 ZDHHC24Q6UX98 284 aa13.46□□□□□ -0.26
RAB3IP-201ENST00000247833 ZBTB33Q86T24 672 aa13.46□□□□□ -0.26
RAB3IP-201ENST00000247833 RIPK2O43353 540 aa13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 NPM3O75607 178 aaKnown RBP13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 RALAP11233 206 aa13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 NEFHP12036 1026 aa13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 GZMAP12544 262 aa13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 MUTP22033 750 aa13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 ADSSP30520 456 aa13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 FKBP1AP62942 108 aaKnown RBP13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 DYNLT1P63172 113 aa13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 FAM47EQ6ZV65 393 aa13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 ZDHHC18Q9NUE0 388 aa13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 FGFR1OP2Q9NVK5 253 aa13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 UVRAGQ9P2Y5 699 aa13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 TCP11X1B4DZS4 312 aa13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 GBP1P32455 592 aa13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 GTF2BQ00403 316 aa13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 SEPT7Q16181 437 aaKnown RBP13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 WDR78Q5VTH9 848 aa13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 ACAD10Q6JQN1 1059 aa13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 SCARA5Q6ZMJ2 495 aa13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 ZDHHC14Q8IZN3 488 aa13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 BSNDQ8WZ55 320 aa13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 FAM129AQ9BZQ8 928 aa13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 VPS37BQ9H9H4 285 aa13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 GRHL1Q9NZI5 618 aa13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 WNT10BO00744 389 aa13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 WDR46O15213 610 aaKnown RBP13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 BRAFP15056 766 aa13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 KRT15P19012 456 aa13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 OSTNP61366 133 aa13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 POU5F1Q01860 360 aaKnown RBP13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 EN1Q05925 392 aaPredicted RBP13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 NFIL3Q16649 462 aa13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 PCNX4Q63HM2 1172 aa13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 NHSQ6T4R5 1651 aa13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 CCDC63Q8NA47 563 aa13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 TMEM161BQ8NDZ6 487 aa13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 SHC3Q92529 594 aa13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 OSBPL7Q9BZF2 842 aa13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 PICK1Q9NRD5 415 aa13.45□□□□□ -0.26
RAB3IP-201ENST00000247833 ATRNL1Q5VV63 1379 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms