RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 CPB2Q96IY4 423 aa20.25■□□□□ 0.83
TNFSF9-201ENST00000245817 EIF3CQ99613 913 aaKnown RBP20.25■□□□□ 0.83
TNFSF9-201ENST00000245817 CDT1Q9H211 546 aa20.25■□□□□ 0.83
TNFSF9-201ENST00000245817 RPF1Q9H9Y2 349 aaKnown RBP20.25■□□□□ 0.83
TNFSF9-201ENST00000245817 CPSF3Q9UKF6 684 aaKnown RBP20.25■□□□□ 0.83
TNFSF9-201ENST00000245817 M0QZ92 97 aa20.24■□□□□ 0.83
TNFSF9-201ENST00000245817 TSPAN1O60635 241 aa20.24■□□□□ 0.83
TNFSF9-201ENST00000245817 PHACTR2O75167 634 aa20.24■□□□□ 0.83
TNFSF9-201ENST00000245817 ARF4P18085 180 aaPredicted RBP20.24■□□□□ 0.83
TNFSF9-201ENST00000245817 CST5P28325 142 aaPredicted RBP20.24■□□□□ 0.83
TNFSF9-201ENST00000245817 JAM2P57087 298 aa20.24■□□□□ 0.83
TNFSF9-201ENST00000245817 OSTNP61366 133 aa20.24■□□□□ 0.83
TNFSF9-201ENST00000245817 MAPK8IP2Q13387 824 aaPredicted RBP20.24■□□□□ 0.83
TNFSF9-201ENST00000245817 HIC1Q14526 733 aa20.24■□□□□ 0.83
TNFSF9-201ENST00000245817 DRAP1Q14919 205 aaPredicted RBP20.24■□□□□ 0.83
TNFSF9-201ENST00000245817 ENOX2Q16206 610 aaKnown RBP20.24■□□□□ 0.83
TNFSF9-201ENST00000245817 ARHGAP44Q17R89 818 aa20.24■□□□□ 0.83
TNFSF9-201ENST00000245817 ARHGAP29Q52LW3 1261 aa20.24■□□□□ 0.83
TNFSF9-201ENST00000245817 LMBRD2Q68DH5 695 aaPredicted RBP20.24■□□□□ 0.83
TNFSF9-201ENST00000245817 PHLDB3Q6NSJ2 640 aa20.24■□□□□ 0.83
TNFSF9-201ENST00000245817 NYAP1Q6ZVC0 841 aa20.24■□□□□ 0.83
TNFSF9-201ENST00000245817 KIAA1328Q86T90 577 aa20.24■□□□□ 0.83
TNFSF9-201ENST00000245817 GPIHBP1Q8IV16 184 aa20.24■□□□□ 0.83
TNFSF9-201ENST00000245817 KLHDC9Q8NEP7 349 aa20.24■□□□□ 0.83
TNFSF9-201ENST00000245817 TAS1R2Q8TE23 839 aa20.24■□□□□ 0.83
TNFSF9-201ENST00000245817 NT5C1BQ96P26 610 aa20.24■□□□□ 0.83
TNFSF9-201ENST00000245817 OSMRQ99650 979 aa20.24■□□□□ 0.83
TNFSF9-201ENST00000245817 GTF2IRD1Q9UHL9 959 aa20.24■□□□□ 0.83
TNFSF9-201ENST00000245817 PTCH2Q9Y6C5 1203 aa20.24■□□□□ 0.83
TNFSF9-201ENST00000245817 FAM189A1O60320 539 aa20.23■□□□□ 0.83
TNFSF9-201ENST00000245817 ZC3H11AO75152 810 aaKnown RBP eCLIP20.23■□□□□ 0.836e-6■■■□□ 16.5
TNFSF9-201ENST00000245817 PLEKP08567 350 aaPredicted RBP20.23■□□□□ 0.83
TNFSF9-201ENST00000245817 HOXC8P31273 242 aa20.23■□□□□ 0.83
TNFSF9-201ENST00000245817 SOX5P35711 763 aa20.23■□□□□ 0.83
TNFSF9-201ENST00000245817 PIK3CAP42336 1068 aa20.23■□□□□ 0.83
TNFSF9-201ENST00000245817 KIF11P52732 1056 aa20.23■□□□□ 0.83
TNFSF9-201ENST00000245817 MFAP3P55082 362 aa20.23■□□□□ 0.83
TNFSF9-201ENST00000245817 WDR49Q8IV35 697 aa20.23■□□□□ 0.83
TNFSF9-201ENST00000245817 TXLNBQ8N3L3 684 aa20.23■□□□□ 0.83
TNFSF9-201ENST00000245817 ZNF516Q92618 1163 aa20.23■□□□□ 0.83
TNFSF9-201ENST00000245817 FAM81BQ96LP2 452 aa20.23■□□□□ 0.83
TNFSF9-201ENST00000245817 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.23■□□□□ 0.83
TNFSF9-201ENST00000245817 PDZD7Q9H5P4 517 aa20.23■□□□□ 0.83
TNFSF9-201ENST00000245817 HMX1Q9NP08 348 aaPredicted RBP20.23■□□□□ 0.83
TNFSF9-201ENST00000245817 LZTFL1Q9NQ48 299 aa20.23■□□□□ 0.83
TNFSF9-201ENST00000245817 CENPFP49454 3210 aa20.23■□□□□ 0.83
TNFSF9-201ENST00000245817 F8VZ95 297 aa20.22■□□□□ 0.83
TNFSF9-201ENST00000245817 CABYRO75952 493 aa20.22■□□□□ 0.83
TNFSF9-201ENST00000245817 IL18RAPO95256 599 aa20.22■□□□□ 0.83
TNFSF9-201ENST00000245817 C4BPAP04003 597 aaKnown RBP20.22■□□□□ 0.83
TNFSF9-201ENST00000245817 INHAP05111 366 aa20.22■□□□□ 0.83
TNFSF9-201ENST00000245817 CLTAP09496 248 aa20.22■□□□□ 0.83
TNFSF9-201ENST00000245817 DARSP14868 501 aaKnown RBP20.22■□□□□ 0.83
TNFSF9-201ENST00000245817 EIF4BP23588 611 aaKnown RBP20.22■□□□□ 0.83
TNFSF9-201ENST00000245817 GRK4P32298 578 aa20.22■□□□□ 0.83
TNFSF9-201ENST00000245817 ZACNQ401N2 412 aa20.22■□□□□ 0.83
TNFSF9-201ENST00000245817 HGSNATQ68CP4 663 aa20.22■□□□□ 0.83
TNFSF9-201ENST00000245817 VPS36Q86VN1 386 aa20.22■□□□□ 0.83
TNFSF9-201ENST00000245817 PPM1KQ8N3J5 372 aa20.22■□□□□ 0.83
TNFSF9-201ENST00000245817 ZNF592Q92610 1267 aa20.22■□□□□ 0.83
TNFSF9-201ENST00000245817 SEMA4DQ92854 862 aa20.22■□□□□ 0.83
TNFSF9-201ENST00000245817 LUC7LQ9NQ29 371 aaKnown RBP20.22■□□□□ 0.83
TNFSF9-201ENST00000245817 A0A1B0GUA9 196 aa20.22■□□□□ 0.83
TNFSF9-201ENST00000245817 GFPT2O94808 682 aa20.22■□□□□ 0.83
TNFSF9-201ENST00000245817 CLSTN1O94985 981 aa20.22■□□□□ 0.83
TNFSF9-201ENST00000245817 RPLP2P05387 115 aaKnown RBP20.22■□□□□ 0.83
TNFSF9-201ENST00000245817 FGFR4P22455 802 aa20.22■□□□□ 0.83
TNFSF9-201ENST00000245817 CRYBB1P53674 252 aaPredicted RBP20.22■□□□□ 0.83
TNFSF9-201ENST00000245817 POU5F1Q01860 360 aaKnown RBP20.22■□□□□ 0.83
TNFSF9-201ENST00000245817 DUOXA2Q1HG44 320 aa20.22■□□□□ 0.83
TNFSF9-201ENST00000245817 C15orf39Q6ZRI6 1047 aa20.22■□□□□ 0.83
TNFSF9-201ENST00000245817 IRF2BP2Q7Z5L9 587 aa20.22■□□□□ 0.83
TNFSF9-201ENST00000245817 ARHGEF19Q8IW93 802 aa20.22■□□□□ 0.83
TNFSF9-201ENST00000245817 HAUS4Q9H6D7 363 aa20.22■□□□□ 0.83
TNFSF9-201ENST00000245817 C1orf112Q9NSG2 853 aa20.22■□□□□ 0.83
TNFSF9-201ENST00000245817 AJAP1Q9UKB5 411 aaPredicted RBP20.22■□□□□ 0.83
TNFSF9-201ENST00000245817 STAG3L1P0CL83 205 aa20.21■□□□□ 0.83
TNFSF9-201ENST00000245817 AXLP30530 894 aa20.21■□□□□ 0.83
TNFSF9-201ENST00000245817 DCAF4L1Q3SXM0 396 aa20.21■□□□□ 0.83
TNFSF9-201ENST00000245817 TDRD10Q5VZ19 366 aaKnown RBP20.21■□□□□ 0.83
TNFSF9-201ENST00000245817 NOTUMQ6P988 496 aa20.21■□□□□ 0.83
TNFSF9-201ENST00000245817 FBXO46Q6PJ61 603 aaPredicted RBP20.21■□□□□ 0.83
TNFSF9-201ENST00000245817 IMPG2Q9BZV3 1241 aa20.21■□□□□ 0.83
TNFSF9-201ENST00000245817 CDHR5Q9HBB8 845 aa20.21■□□□□ 0.83
TNFSF9-201ENST00000245817 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.21■□□□□ 0.833e-6■■■■■ 93.2
TNFSF9-201ENST00000245817 HLA-DRAP01903 254 aa20.2■□□□□ 0.82
TNFSF9-201ENST00000245817 TNNC2P02585 160 aa20.2■□□□□ 0.82
TNFSF9-201ENST00000245817 TMEM191BP0C7N4 346 aa20.2■□□□□ 0.82
TNFSF9-201ENST00000245817 PRKCIP41743 596 aa20.2■□□□□ 0.82
TNFSF9-201ENST00000245817 WNT7BP56706 349 aa20.2■□□□□ 0.82
TNFSF9-201ENST00000245817 SNX17Q15036 470 aa20.2■□□□□ 0.82
TNFSF9-201ENST00000245817 ENOSF1Q7L5Y1 443 aa20.2■□□□□ 0.82
TNFSF9-201ENST00000245817 KIF18AQ8NI77 898 aa20.2■□□□□ 0.82
TNFSF9-201ENST00000245817 ANKRD36BP1Q96IX9 119 aa20.2■□□□□ 0.82
TNFSF9-201ENST00000245817 KRT86O43790 486 aa20.19■□□□□ 0.82
TNFSF9-201ENST00000245817 KIF5CO60282 957 aa20.19■□□□□ 0.82
TNFSF9-201ENST00000245817 EVI5O60447 810 aa20.19■□□□□ 0.82
TNFSF9-201ENST00000245817 ANXA13P27216 316 aa20.19■□□□□ 0.82
TNFSF9-201ENST00000245817 CYP27A1Q02318 531 aa20.19■□□□□ 0.82
TNFSF9-201ENST00000245817 CCSAPQ6IQ19 270 aaPredicted RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms