RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 GGA2Q9UJY4 613 aa23.52■■□□□ 1.36
RNF39-201ENST00000244360 SNCAIPQ9Y6H5 919 aa23.52■■□□□ 1.36
RNF39-201ENST00000244360 GOLGA6L10A0A0M3HER8 536 aa23.52■■□□□ 1.36
RNF39-201ENST00000244360 FAM170AA1A519 330 aa23.52■■□□□ 1.36
RNF39-201ENST00000244360 GRIN3BO60391 1043 aa23.52■■□□□ 1.36
RNF39-201ENST00000244360 USP2O75604 605 aaPredicted RBP23.52■■□□□ 1.36
RNF39-201ENST00000244360 CTNNA1P35221 906 aaKnown RBP23.52■■□□□ 1.36
RNF39-201ENST00000244360 SPDYCQ5MJ68 293 aa23.52■■□□□ 1.36
RNF39-201ENST00000244360 LBX2Q6XYB7 198 aa23.52■■□□□ 1.36
RNF39-201ENST00000244360 GPC2Q8N158 579 aa23.52■■□□□ 1.36
RNF39-201ENST00000244360 CEP89Q96ST8 783 aa23.52■■□□□ 1.36
RNF39-201ENST00000244360 PORCNQ9H237 461 aa23.52■■□□□ 1.36
RNF39-201ENST00000244360 MYH9P35579 1960 aaKnown RBP23.51■■□□□ 1.35
RNF39-201ENST00000244360 H0YGN5 161 aa23.51■■□□□ 1.35
RNF39-201ENST00000244360 KIAA0754O94854 1291 aa23.51■■□□□ 1.35
RNF39-201ENST00000244360 HSPA6P17066 643 aa23.51■■□□□ 1.35
RNF39-201ENST00000244360 LIG4P49917 911 aa23.51■■□□□ 1.35
RNF39-201ENST00000244360 PEX5P50542 639 aa23.51■■□□□ 1.35
RNF39-201ENST00000244360 POLGP54098 1239 aaPredicted RBP23.51■■□□□ 1.35
RNF39-201ENST00000244360 AGBL2Q5U5Z8 902 aa23.51■■□□□ 1.35
RNF39-201ENST00000244360 CYFIP1Q7L576 1253 aa23.51■■□□□ 1.35
RNF39-201ENST00000244360 C3orf20Q8ND61 904 aa23.51■■□□□ 1.35
RNF39-201ENST00000244360 PSPC1Q8WXF1 523 aaKnown RBP23.51■■□□□ 1.35
RNF39-201ENST00000244360 ZNF516Q92618 1163 aa23.51■■□□□ 1.35
RNF39-201ENST00000244360 KRT35Q92764 455 aa23.51■■□□□ 1.35
RNF39-201ENST00000244360 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.51■■□□□ 1.35
RNF39-201ENST00000244360 UVRAGQ9P2Y5 699 aa23.51■■□□□ 1.35
RNF39-201ENST00000244360 TRPC6Q9Y210 931 aa23.51■■□□□ 1.35
RNF39-201ENST00000244360 UTP11Q9Y3A2 253 aaKnown RBP23.51■■□□□ 1.35
RNF39-201ENST00000244360 NFS1Q9Y697 457 aa23.51■■□□□ 1.35
RNF39-201ENST00000244360 DAPK3O43293 454 aa23.51■■□□□ 1.35
RNF39-201ENST00000244360 SORBS3O60504 671 aa23.51■■□□□ 1.35
RNF39-201ENST00000244360 COMTP21964 271 aa23.51■■□□□ 1.35
RNF39-201ENST00000244360 GUCY1A3Q02108 690 aa23.51■■□□□ 1.35
RNF39-201ENST00000244360 CNTN2Q02246 1040 aa23.51■■□□□ 1.35
RNF39-201ENST00000244360 ZNF211Q13398 564 aaPredicted RBP23.51■■□□□ 1.35
RNF39-201ENST00000244360 YTHDF3Q7Z739 585 aaKnown RBP23.51■■□□□ 1.35
RNF39-201ENST00000244360 PROCA1Q8NCQ7 364 aaPredicted RBP23.51■■□□□ 1.35
RNF39-201ENST00000244360 DHX38Q92620 1227 aaKnown RBP23.51■■□□□ 1.35
RNF39-201ENST00000244360 NIFKQ9BYG3 293 aaKnown RBP23.51■■□□□ 1.35
RNF39-201ENST00000244360 CELF4Q9BZC1 486 aaKnown RBP23.51■■□□□ 1.35
RNF39-201ENST00000244360 WNT8AQ9H1J5 351 aa23.51■■□□□ 1.35
RNF39-201ENST00000244360 PAPPA2Q9BXP8 1791 aa23.5■■□□□ 1.35
RNF39-201ENST00000244360 ARL2P36404 184 aa23.5■■□□□ 1.35
RNF39-201ENST00000244360 NAMPTP43490 491 aa23.5■■□□□ 1.35
RNF39-201ENST00000244360 ALDH5A1P51649 535 aaPredicted RBP23.5■■□□□ 1.35
RNF39-201ENST00000244360 FSTL1Q12841 308 aa23.5■■□□□ 1.35
RNF39-201ENST00000244360 ZNF564Q8TBZ8 553 aaPredicted RBP23.5■■□□□ 1.35
RNF39-201ENST00000244360 ASAP3Q8TDY4 903 aa23.5■■□□□ 1.35
RNF39-201ENST00000244360 RAB17Q9H0T7 212 aa23.5■■□□□ 1.35
RNF39-201ENST00000244360 ERVK-5Q9HDB9 667 aa23.5■■□□□ 1.35
RNF39-201ENST00000244360 PTPRFP10586 1907 aa23.5■■□□□ 1.35
RNF39-201ENST00000244360 FAM187AA6NFU0 413 aa23.49■■□□□ 1.35
RNF39-201ENST00000244360 ATMINO43313 823 aaPredicted RBP23.49■■□□□ 1.35
RNF39-201ENST00000244360 GLRA2P23416 452 aa23.49■■□□□ 1.35
RNF39-201ENST00000244360 EDNRBP24530 442 aa23.49■■□□□ 1.35
RNF39-201ENST00000244360 MARCKSL1P49006 195 aa23.49■■□□□ 1.35
RNF39-201ENST00000244360 UAP1Q16222 522 aaPredicted RBP23.49■■□□□ 1.35
RNF39-201ENST00000244360 ZACNQ401N2 412 aa23.49■■□□□ 1.35
RNF39-201ENST00000244360 NAA35Q5VZE5 725 aa23.49■■□□□ 1.35
RNF39-201ENST00000244360 ACAD10Q6JQN1 1059 aa23.49■■□□□ 1.35
RNF39-201ENST00000244360 CCDC125Q86Z20 511 aa23.49■■□□□ 1.35
RNF39-201ENST00000244360 NUP85Q9BW27 656 aa23.49■■□□□ 1.35
RNF39-201ENST00000244360 RABEP2Q9H5N1 569 aa23.49■■□□□ 1.35
RNF39-201ENST00000244360 FBXO40Q9UH90 709 aa23.49■■□□□ 1.35
RNF39-201ENST00000244360 ZNFX1Q9P2E3 1918 aaKnown RBP23.49■■□□□ 1.35
RNF39-201ENST00000244360 GGPS1O95749 300 aa23.49■■□□□ 1.35
RNF39-201ENST00000244360 CTNNA2P26232 953 aa23.49■■□□□ 1.35
RNF39-201ENST00000244360 ZNF844Q08AG5 666 aa23.49■■□□□ 1.35
RNF39-201ENST00000244360 STRN3Q13033 797 aa23.49■■□□□ 1.35
RNF39-201ENST00000244360 VGLL4Q14135 290 aa23.49■■□□□ 1.35
RNF39-201ENST00000244360 DHX34Q14147 1143 aaKnown RBP23.49■■□□□ 1.35
RNF39-201ENST00000244360 MESDQ14696 234 aa23.49■■□□□ 1.35
RNF39-201ENST00000244360 CLEC16AQ2KHT3 1053 aa23.49■■□□□ 1.35
RNF39-201ENST00000244360 TREML2Q5T2D2 321 aa23.49■■□□□ 1.35
RNF39-201ENST00000244360 RIOX2Q8IUF8 465 aa23.49■■□□□ 1.35
RNF39-201ENST00000244360 ANKRD35Q8N283 1001 aa23.49■■□□□ 1.35
RNF39-201ENST00000244360 ATP8B4Q8TF62 1192 aa23.49■■□□□ 1.35
RNF39-201ENST00000244360 TMEM143Q96AN5 459 aa23.49■■□□□ 1.35
RNF39-201ENST00000244360 ZNF653Q96CK0 615 aa23.49■■□□□ 1.35
RNF39-201ENST00000244360 C1orf112Q9NSG2 853 aa23.49■■□□□ 1.35
RNF39-201ENST00000244360 NLRP14Q86W24 1093 aa23.48■■□□□ 1.35
RNF39-201ENST00000244360 ZNF473Q8WTR7 871 aaKnown RBP23.48■■□□□ 1.35
RNF39-201ENST00000244360 PI4K2AQ9BTU6 479 aa23.48■■□□□ 1.35
RNF39-201ENST00000244360 TMEM110-MUSTN1A8MSY1 372 aa23.48■■□□□ 1.35
RNF39-201ENST00000244360 MEFVO15553 781 aaPredicted RBP23.48■■□□□ 1.35
RNF39-201ENST00000244360 FAM107AO95990 144 aa23.48■■□□□ 1.35
RNF39-201ENST00000244360 DR1Q01658 176 aa23.48■■□□□ 1.35
RNF39-201ENST00000244360 DUPD1Q68J44 220 aa23.48■■□□□ 1.35
RNF39-201ENST00000244360 BTBD7Q9P203 1132 aa23.48■■□□□ 1.35
RNF39-201ENST00000244360 CHORDC1Q9UHD1 332 aaPredicted RBP23.48■■□□□ 1.35
RNF39-201ENST00000244360 AGO2Q9UKV8 859 aaKnown RBP23.48■■□□□ 1.35
RNF39-201ENST00000244360 C4BPAP04003 597 aaKnown RBP23.47■■□□□ 1.35
RNF39-201ENST00000244360 UBA1P22314 1058 aaKnown RBP23.47■■□□□ 1.35
RNF39-201ENST00000244360 RFC5P40937 340 aa23.47■■□□□ 1.35
RNF39-201ENST00000244360 NLRP11P59045 1033 aaKnown RBP23.47■■□□□ 1.35
RNF39-201ENST00000244360 TARBP2Q15633 366 aaKnown RBP23.47■■□□□ 1.35
RNF39-201ENST00000244360 CRELD2Q6UXH1 353 aaPredicted RBP23.47■■□□□ 1.35
RNF39-201ENST00000244360 TMC3Q7Z5M5 1100 aa23.47■■□□□ 1.35
RNF39-201ENST00000244360 MYCBPAPQ8TBZ2 947 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms