RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 TUBGCP4Q9UGJ1 667 aa21.23■□□□□ 0.99
HOXC13-201ENST00000243056 AMACRQ9UHK6 382 aa21.23■□□□□ 0.99
HOXC13-201ENST00000243056 VWA5AO00534 786 aa21.22■□□□□ 0.99
HOXC13-201ENST00000243056 GFPT2O94808 682 aa21.22■□□□□ 0.99
HOXC13-201ENST00000243056 KLRC1P26715 233 aa21.22■□□□□ 0.99
HOXC13-201ENST00000243056 PLOD1Q02809 727 aaPredicted RBP21.22■□□□□ 0.99
HOXC13-201ENST00000243056 UBAP2Q5T6F2 1119 aaKnown RBP21.22■□□□□ 0.99
HOXC13-201ENST00000243056 FAM47EQ6ZV65 393 aa21.22■□□□□ 0.99
HOXC13-201ENST00000243056 ZC3H18Q86VM9 953 aaKnown RBP21.22■□□□□ 0.99
HOXC13-201ENST00000243056 FAM114A2Q9NRY5 505 aa21.22■□□□□ 0.99
HOXC13-201ENST00000243056 TMOD4Q9NZQ9 345 aa21.22■□□□□ 0.99
HOXC13-201ENST00000243056 SCN4AP35499 1836 aa21.22■□□□□ 0.99
HOXC13-201ENST00000243056 MROH7Q68CQ1 1323 aa21.22■□□□□ 0.99
HOXC13-201ENST00000243056 CCDC166P0CW27 439 aa21.21■□□□□ 0.99
HOXC13-201ENST00000243056 P3H1Q32P28 736 aa21.21■□□□□ 0.99
HOXC13-201ENST00000243056 SEPT14Q6ZU15 432 aa21.21■□□□□ 0.99
HOXC13-201ENST00000243056 CSGALNACT2Q8N6G5 542 aa21.21■□□□□ 0.99
HOXC13-201ENST00000243056 TSPAN18Q96SJ8 248 aa21.21■□□□□ 0.99
HOXC13-201ENST00000243056 ANO3Q9BYT9 981 aa21.21■□□□□ 0.99
HOXC13-201ENST00000243056 R3HDMLQ9H3Y0 253 aa21.21■□□□□ 0.99
HOXC13-201ENST00000243056 SLC38A10Q9HBR0 1119 aa21.21■□□□□ 0.99
HOXC13-201ENST00000243056 MAGEA13PA6NCF6 341 aa21.21■□□□□ 0.99
HOXC13-201ENST00000243056 RGS16O15492 202 aaPredicted RBP21.21■□□□□ 0.99
HOXC13-201ENST00000243056 TTI1O43156 1089 aa21.21■□□□□ 0.99
HOXC13-201ENST00000243056 MTIF2P46199 727 aaKnown RBP21.21■□□□□ 0.99
HOXC13-201ENST00000243056 ZRSR2Q15696 482 aaKnown RBP21.21■□□□□ 0.99
HOXC13-201ENST00000243056 PPP1R18Q6NYC8 613 aa21.21■□□□□ 0.99
HOXC13-201ENST00000243056 ZNF365Q70YC5 407 aa21.21■□□□□ 0.99
HOXC13-201ENST00000243056 RRAGAQ7L523 313 aa21.21■□□□□ 0.99
HOXC13-201ENST00000243056 NRG4Q8WWG1 115 aa21.21■□□□□ 0.99
HOXC13-201ENST00000243056 CELF4Q9BZC1 486 aaKnown RBP21.21■□□□□ 0.99
HOXC13-201ENST00000243056 GINM1Q9NU53 330 aa21.21■□□□□ 0.99
HOXC13-201ENST00000243056 PDP2Q9P2J9 529 aa21.21■□□□□ 0.99
HOXC13-201ENST00000243056 NUDT17P0C025 328 aa21.2■□□□□ 0.99
HOXC13-201ENST00000243056 ITGA4P13612 1032 aa21.2■□□□□ 0.99
HOXC13-201ENST00000243056 PAX3P23760 479 aa21.2■□□□□ 0.99
HOXC13-201ENST00000243056 TRAPPC10P48553 1259 aa21.2■□□□□ 0.99
HOXC13-201ENST00000243056 BTG3Q14201 252 aaPredicted RBP21.2■□□□□ 0.99
HOXC13-201ENST00000243056 CGB2Q6NT52 195 aa21.2■□□□□ 0.99
HOXC13-201ENST00000243056 TSHZ1Q6ZSZ6 1077 aa21.2■□□□□ 0.99
HOXC13-201ENST00000243056 SMC1BQ8NDV3 1235 aa21.2■□□□□ 0.99
HOXC13-201ENST00000243056 MGARPQ8TDB4 240 aa21.2■□□□□ 0.99
HOXC13-201ENST00000243056 RNF25Q96BH1 459 aaPredicted RBP21.2■□□□□ 0.99
HOXC13-201ENST00000243056 DDX50Q9BQ39 737 aaKnown RBP21.2■□□□□ 0.99
HOXC13-201ENST00000243056 INTUQ9ULD6 942 aa21.2■□□□□ 0.99
HOXC13-201ENST00000243056 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.2■□□□□ 0.98
HOXC13-201ENST00000243056 CELF2O95319 508 aaKnown RBP21.2■□□□□ 0.98
HOXC13-201ENST00000243056 VHLP40337 213 aa21.2■□□□□ 0.98
HOXC13-201ENST00000243056 GJA8P48165 433 aa21.2■□□□□ 0.98
HOXC13-201ENST00000243056 NAB2Q15742 525 aa21.2■□□□□ 0.98
HOXC13-201ENST00000243056 COL20A1Q9P218 1284 aa21.2■□□□□ 0.98
HOXC13-201ENST00000243056 CHMP2BQ9UQN3 213 aa21.2■□□□□ 0.98
HOXC13-201ENST00000243056 SIK3Q9Y2K2 1263 aa21.2■□□□□ 0.98
HOXC13-201ENST00000243056 WDR90Q96KV7 1748 aa21.2■□□□□ 0.98
HOXC13-201ENST00000243056 C19orf81C9J6K1 198 aa21.19■□□□□ 0.98
HOXC13-201ENST00000243056 CEP104O60308 925 aa21.19■□□□□ 0.98
HOXC13-201ENST00000243056 ICAM1P05362 532 aa21.19■□□□□ 0.98
HOXC13-201ENST00000243056 TXKP42681 527 aa21.19■□□□□ 0.98
HOXC13-201ENST00000243056 CATSPERGQ6ZRH7 1159 aa21.19■□□□□ 0.98
HOXC13-201ENST00000243056 ECHDC2Q86YB7 292 aa21.19■□□□□ 0.98
HOXC13-201ENST00000243056 RNF168Q8IYW5 571 aaPredicted RBP21.19■□□□□ 0.98
HOXC13-201ENST00000243056 SEC14L1Q92503 715 aa21.19■□□□□ 0.98
HOXC13-201ENST00000243056 DENND2DQ9H6A0 471 aaPredicted RBP21.19■□□□□ 0.98
HOXC13-201ENST00000243056 PLA2G6O60733 806 aa21.19■□□□□ 0.98
HOXC13-201ENST00000243056 UBTFL6P0CB48 400 aaPredicted RBP21.19■□□□□ 0.98
HOXC13-201ENST00000243056 TECP42680 631 aa21.19■□□□□ 0.98
HOXC13-201ENST00000243056 TMEM132BQ14DG7 1078 aa21.19■□□□□ 0.98
HOXC13-201ENST00000243056 PTPROQ16827 1216 aa21.19■□□□□ 0.98
HOXC13-201ENST00000243056 ARHGAP18Q8N392 663 aa21.19■□□□□ 0.98
HOXC13-201ENST00000243056 ZBTB8BQ8NAP8 495 aaPredicted RBP21.19■□□□□ 0.98
HOXC13-201ENST00000243056 SCG3Q8WXD2 468 aaKnown RBP21.19■□□□□ 0.98
HOXC13-201ENST00000243056 TRIM31Q9BZY9 425 aa21.19■□□□□ 0.98
HOXC13-201ENST00000243056 TXLNGQ9NUQ3 528 aa21.19■□□□□ 0.98
HOXC13-201ENST00000243056 SUN2Q9UH99 717 aa21.19■□□□□ 0.98
HOXC13-201ENST00000243056 SKIP12755 728 aa21.18■□□□□ 0.98
HOXC13-201ENST00000243056 CYP11B2P19099 503 aa21.18■□□□□ 0.98
HOXC13-201ENST00000243056 HGSNATQ68CP4 663 aa21.18■□□□□ 0.98
HOXC13-201ENST00000243056 ERO1BQ86YB8 467 aa21.18■□□□□ 0.98
HOXC13-201ENST00000243056 AGGF1Q8N302 714 aaeCLIP21.18■□□□□ 0.98
HOXC13-201ENST00000243056 SMYD1Q8NB12 490 aa21.18■□□□□ 0.98
HOXC13-201ENST00000243056 CLEC4DQ8WXI8 215 aa21.18■□□□□ 0.98
HOXC13-201ENST00000243056 TAF4BQ92750 862 aa21.18■□□□□ 0.98
HOXC13-201ENST00000243056 DDX27Q96GQ7 796 aaKnown RBP21.18■□□□□ 0.98
HOXC13-201ENST00000243056 FMO2Q99518 471 aa21.18■□□□□ 0.98
HOXC13-201ENST00000243056 GOLPH3Q9H4A6 298 aa21.18■□□□□ 0.98
HOXC13-201ENST00000243056 CTDP1Q9Y5B0 961 aaPredicted RBP21.18■□□□□ 0.98
HOXC13-201ENST00000243056 USH1CQ9Y6N9 552 aa21.18■□□□□ 0.98
HOXC13-201ENST00000243056 PSMA7O14818 248 aa21.18■□□□□ 0.98
HOXC13-201ENST00000243056 AGTP01019 485 aa21.18■□□□□ 0.98
HOXC13-201ENST00000243056 TARSP26639 723 aaKnown RBP21.18■□□□□ 0.98
HOXC13-201ENST00000243056 EPHB2P29323 1055 aa21.18■□□□□ 0.98
HOXC13-201ENST00000243056 COG2Q14746 738 aa21.18■□□□□ 0.98
HOXC13-201ENST00000243056 DUS1LQ6P1R4 473 aaKnown RBP21.18■□□□□ 0.98
HOXC13-201ENST00000243056 BAP1Q92560 729 aa21.18■□□□□ 0.98
HOXC13-201ENST00000243056 HIC2Q96JB3 615 aa21.18■□□□□ 0.98
HOXC13-201ENST00000243056 TRIM51Q9BSJ1 452 aa21.18■□□□□ 0.98
HOXC13-201ENST00000243056 CCDC113Q9H0I3 377 aa21.18■□□□□ 0.98
HOXC13-201ENST00000243056 MYLK2Q9H1R3 596 aa21.18■□□□□ 0.98
HOXC13-201ENST00000243056 WDR37Q9Y2I8 494 aa21.18■□□□□ 0.98
HOXC13-201ENST00000243056 USP20Q9Y2K6 914 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms