RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 POMCP01189 267 aa12.03□□□□□ -0.48
TNFAIP3-201ENST00000237289 CASP4P49662 377 aa12.03□□□□□ -0.48
TNFAIP3-201ENST00000237289 ASB7Q9H672 318 aa12.03□□□□□ -0.48
TNFAIP3-201ENST00000237289 FAM207AQ9NSI2 230 aaPredicted RBP12.03□□□□□ -0.48
TNFAIP3-201ENST00000237289 AGAP1Q9UPQ3 857 aa12.03□□□□□ -0.48
TNFAIP3-201ENST00000237289 CSPG5O95196 566 aa12.02□□□□□ -0.48
TNFAIP3-201ENST00000237289 KRT31Q15323 416 aa12.02□□□□□ -0.48
TNFAIP3-201ENST00000237289 RPAINQ86UA6 219 aa12.02□□□□□ -0.48
TNFAIP3-201ENST00000237289 LPPQ93052 612 aa12.02□□□□□ -0.48
TNFAIP3-201ENST00000237289 RNPC3Q96LT9 517 aaKnown RBP12.02□□□□□ -0.48
TNFAIP3-201ENST00000237289 NUP58Q9BVL2 599 aa12.02□□□□□ -0.48
TNFAIP3-201ENST00000237289 GCNT4Q9P109 453 aa12.02□□□□□ -0.48
TNFAIP3-201ENST00000237289 GIT1Q9Y2X7 761 aa12.02□□□□□ -0.48
TNFAIP3-201ENST00000237289 PLXNA1Q9UIW2 1896 aa12.02□□□□□ -0.48
TNFAIP3-201ENST00000237289 GRM5P41594 1212 aa12.02□□□□□ -0.49
TNFAIP3-201ENST00000237289 ARHGAP44Q17R89 818 aa12.02□□□□□ -0.49
TNFAIP3-201ENST00000237289 ZNF699Q32M78 642 aa12.02□□□□□ -0.49
TNFAIP3-201ENST00000237289 PRG3Q9Y2Y8 225 aaPredicted RBP12.02□□□□□ -0.49
TNFAIP3-201ENST00000237289 ZNF236Q9UL36 1845 aa12.02□□□□□ -0.49
TNFAIP3-201ENST00000237289 A0A0B4J269 797 aa12.02□□□□□ -0.49
TNFAIP3-201ENST00000237289 HUS1O60921 280 aa12.02□□□□□ -0.49
TNFAIP3-201ENST00000237289 ZC3H11AO75152 810 aaKnown RBP eCLIP12.02□□□□□ -0.49
TNFAIP3-201ENST00000237289 ARID5AQ03989 594 aa12.02□□□□□ -0.49
TNFAIP3-201ENST00000237289 MCL1Q07820 350 aa12.02□□□□□ -0.49
TNFAIP3-201ENST00000237289 CYP24A1Q07973 514 aa12.02□□□□□ -0.49
TNFAIP3-201ENST00000237289 COBLL1Q53SF7 1204 aa12.02□□□□□ -0.49
TNFAIP3-201ENST00000237289 BRSK2Q8IWQ3 736 aa12.02□□□□□ -0.49
TNFAIP3-201ENST00000237289 COLEC11Q9BWP8 271 aa12.02□□□□□ -0.49
TNFAIP3-201ENST00000237289 EIF2AQ9BY44 585 aaKnown RBP12.02□□□□□ -0.49
TNFAIP3-201ENST00000237289 SNX25Q9H3E2 840 aa12.02□□□□□ -0.49
TNFAIP3-201ENST00000237289 NXF3Q9H4D5 531 aaKnown RBP12.02□□□□□ -0.49
TNFAIP3-201ENST00000237289 AGO3Q9H9G7 860 aaKnown RBP12.02□□□□□ -0.49
TNFAIP3-201ENST00000237289 IL23AQ9NPF7 189 aa12.02□□□□□ -0.49
TNFAIP3-201ENST00000237289 LUC7L2Q9Y383 392 aaKnown RBP12.02□□□□□ -0.49
TNFAIP3-201ENST00000237289 RBBP6Q7Z6E9 1792 aaKnown RBP12.02□□□□□ -0.49
TNFAIP3-201ENST00000237289 TGFB1I1O43294 461 aa12.02□□□□□ -0.49
TNFAIP3-201ENST00000237289 AKAP3O75969 853 aa12.02□□□□□ -0.49
TNFAIP3-201ENST00000237289 IGHA2P01877 340 aa12.02□□□□□ -0.49
TNFAIP3-201ENST00000237289 MLH1P40692 756 aa12.02□□□□□ -0.49
TNFAIP3-201ENST00000237289 CEP57Q86XR8 500 aa12.02□□□□□ -0.49
TNFAIP3-201ENST00000237289 PARP14Q460N5 1801 aa12.01□□□□□ -0.49
TNFAIP3-201ENST00000237289 ALDH2P05091 517 aa12.01□□□□□ -0.49
TNFAIP3-201ENST00000237289 CD19P15391 556 aa12.01□□□□□ -0.49
TNFAIP3-201ENST00000237289 PMS1P54277 932 aaKnown RBP12.01□□□□□ -0.49
TNFAIP3-201ENST00000237289 SLC43A3Q8NBI5 491 aa12.01□□□□□ -0.49
TNFAIP3-201ENST00000237289 FBXL13Q8NEE6 735 aa12.01□□□□□ -0.49
TNFAIP3-201ENST00000237289 HELQQ8TDG4 1101 aa12.01□□□□□ -0.49
TNFAIP3-201ENST00000237289 TMEM169Q96HH4 297 aa12.01□□□□□ -0.49
TNFAIP3-201ENST00000237289 FAM81BQ96LP2 452 aa12.01□□□□□ -0.49
TNFAIP3-201ENST00000237289 KCTD10Q9H3F6 313 aa12.01□□□□□ -0.49
TNFAIP3-201ENST00000237289 PLEKHA5Q9HAU0 1116 aa12.01□□□□□ -0.49
TNFAIP3-201ENST00000237289 LUC7LQ9NQ29 371 aaKnown RBP12.01□□□□□ -0.49
TNFAIP3-201ENST00000237289 DPP3Q9NY33 737 aa12.01□□□□□ -0.49
TNFAIP3-201ENST00000237289 LACTBL1A8MY62 500 aa12.01□□□□□ -0.49
TNFAIP3-201ENST00000237289 EOMESO95936 686 aa12.01□□□□□ -0.49
TNFAIP3-201ENST00000237289 ATP1A3P13637 1013 aa12.01□□□□□ -0.49
TNFAIP3-201ENST00000237289 BMP6P22004 513 aa12.01□□□□□ -0.49
TNFAIP3-201ENST00000237289 SLC8A3P57103 927 aa12.01□□□□□ -0.49
TNFAIP3-201ENST00000237289 TAF12Q16514 161 aa12.01□□□□□ -0.49
TNFAIP3-201ENST00000237289 FAM43BQ6ZT52 329 aaPredicted RBP12.01□□□□□ -0.49
TNFAIP3-201ENST00000237289 EPM2AIP1Q7L775 607 aaPredicted RBP12.01□□□□□ -0.49
TNFAIP3-201ENST00000237289 IFNLR1Q8IU57 520 aaPredicted RBP12.01□□□□□ -0.49
TNFAIP3-201ENST00000237289 TMC2Q8TDI7 906 aa12.01□□□□□ -0.49
TNFAIP3-201ENST00000237289 XPO4Q9C0E2 1151 aaKnown RBP12.01□□□□□ -0.49
TNFAIP3-201ENST00000237289 TLL1O43897 1013 aa12.01□□□□□ -0.49
TNFAIP3-201ENST00000237289 B3GAT3O94766 335 aa12.01□□□□□ -0.49
TNFAIP3-201ENST00000237289 MFAP3P55082 362 aa12.01□□□□□ -0.49
TNFAIP3-201ENST00000237289 ADAM17P78536 824 aa12.01□□□□□ -0.49
TNFAIP3-201ENST00000237289 KRT17Q04695 432 aa12.01□□□□□ -0.49
TNFAIP3-201ENST00000237289 NOMO2Q5JPE7 1267 aa12.01□□□□□ -0.49
TNFAIP3-201ENST00000237289 SLC9A9Q8IVB4 645 aa12.01□□□□□ -0.49
TNFAIP3-201ENST00000237289 CEP120Q8N960 986 aa12.01□□□□□ -0.49
TNFAIP3-201ENST00000237289 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.01□□□□□ -0.49
TNFAIP3-201ENST00000237289 SCNN1GP51170 649 aa12□□□□□ -0.49
TNFAIP3-201ENST00000237289 TMEM40Q8WWA1 233 aa12□□□□□ -0.49
TNFAIP3-201ENST00000237289 CGRRF1Q99675 332 aa12□□□□□ -0.49
TNFAIP3-201ENST00000237289 NLRC4Q9NPP4 1024 aa12□□□□□ -0.49
TNFAIP3-201ENST00000237289 MSRAQ9UJ68 235 aa12□□□□□ -0.49
TNFAIP3-201ENST00000237289 FAN1Q9Y2M0 1017 aa12□□□□□ -0.49
TNFAIP3-201ENST00000237289 CEP83Q9Y592 693 aa12□□□□□ -0.49
TNFAIP3-201ENST00000237289 PCDHB12Q9Y5F1 795 aa12□□□□□ -0.49
TNFAIP3-201ENST00000237289 NCOA4Q13772 614 aa12□□□□□ -0.49
TNFAIP3-201ENST00000237289 ZNF365Q70YC5 407 aa12□□□□□ -0.49
TNFAIP3-201ENST00000237289 NT5DC4Q86YG4 428 aa12□□□□□ -0.49
TNFAIP3-201ENST00000237289 WDR49Q8IV35 697 aa12□□□□□ -0.49
TNFAIP3-201ENST00000237289 DHX40Q8IX18 779 aaKnown RBP12□□□□□ -0.49
TNFAIP3-201ENST00000237289 DDX27Q96GQ7 796 aaKnown RBP12□□□□□ -0.49
TNFAIP3-201ENST00000237289 IKZF4Q9H2S9 585 aa12□□□□□ -0.49
TNFAIP3-201ENST00000237289 TMEM8AQ9HCN3 771 aa12□□□□□ -0.49
TNFAIP3-201ENST00000237289 ERVK-5Q9HDB9 667 aa12□□□□□ -0.49
TNFAIP3-201ENST00000237289 KIAA1217Q5T5P2 1943 aa12□□□□□ -0.49
TNFAIP3-201ENST00000237289 A0A0U1RQF3 1178 aa12□□□□□ -0.49
TNFAIP3-201ENST00000237289 TRIM14Q14142 442 aa12□□□□□ -0.49
TNFAIP3-201ENST00000237289 C1orf53Q5VUE5 145 aa12□□□□□ -0.49
TNFAIP3-201ENST00000237289 C12orf56Q8IXR9 622 aa12□□□□□ -0.49
TNFAIP3-201ENST00000237289 THEM5Q8N1Q8 247 aa12□□□□□ -0.49
TNFAIP3-201ENST00000237289 TMEM161AQ9NX61 479 aa12□□□□□ -0.49
TNFAIP3-201ENST00000237289 UMODL1Q5DID0 1318 aa12□□□□□ -0.49
TNFAIP3-201ENST00000237289 PIGRP01833 764 aa12□□□□□ -0.49
TNFAIP3-201ENST00000237289 ITGB3P05106 788 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms