RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 CCDC134Q9H6E4 229 aa16.65■□□□□ 0.26
CTSD-201ENST00000236671 COL20A1Q9P218 1284 aa16.65■□□□□ 0.26
CTSD-201ENST00000236671 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.65■□□□□ 0.26
CTSD-201ENST00000236671 GTF3C4Q9UKN8 822 aa16.65■□□□□ 0.26
CTSD-201ENST00000236671 PTPN22Q9Y2R2 807 aa16.65■□□□□ 0.26
CTSD-201ENST00000236671 PASKQ96RG2 1323 aa16.65■□□□□ 0.26
CTSD-201ENST00000236671 CHUKO15111 745 aa16.64■□□□□ 0.25
CTSD-201ENST00000236671 HSD17B4P51659 736 aa16.64■□□□□ 0.25
CTSD-201ENST00000236671 XRCC4Q13426 336 aa16.64■□□□□ 0.25
CTSD-201ENST00000236671 ZNF568Q3ZCX4 644 aa16.64■□□□□ 0.25
CTSD-201ENST00000236671 TAX1BP1Q86VP1 789 aa16.64■□□□□ 0.25
CTSD-201ENST00000236671 LRRC34Q8IZ02 419 aa16.64■□□□□ 0.25
CTSD-201ENST00000236671 IL31RAQ8NI17 732 aa16.64■□□□□ 0.25
CTSD-201ENST00000236671 SEMA4DQ92854 862 aa16.64■□□□□ 0.25
CTSD-201ENST00000236671 ZKSCAN4Q969J2 545 aaPredicted RBP16.64■□□□□ 0.25
CTSD-201ENST00000236671 ZNF653Q96CK0 615 aa16.64■□□□□ 0.25
CTSD-201ENST00000236671 ST6GALNAC4Q9H4F1 302 aa16.64■□□□□ 0.25
CTSD-201ENST00000236671 FBXO28Q9NVF7 368 aa16.64■□□□□ 0.25
CTSD-201ENST00000236671 SSC5DA1L4H1 1573 aa16.64■□□□□ 0.25
CTSD-201ENST00000236671 CCT8L1PA6NM43 557 aa16.64■□□□□ 0.25
CTSD-201ENST00000236671 ATP2C2O75185 946 aa16.64■□□□□ 0.25
CTSD-201ENST00000236671 SLCO1A2P46721 670 aa16.64■□□□□ 0.25
CTSD-201ENST00000236671 KCNJ1P48048 391 aa16.64■□□□□ 0.25
CTSD-201ENST00000236671 AUHQ13825 339 aaKnown RBP16.64■□□□□ 0.25
CTSD-201ENST00000236671 ITIH4Q14624 930 aa16.64■□□□□ 0.25
CTSD-201ENST00000236671 MFSD5Q6N075 450 aa16.64■□□□□ 0.25
CTSD-201ENST00000236671 CCDC91Q7Z6B0 441 aa16.64■□□□□ 0.25
CTSD-201ENST00000236671 FAM160B2Q86V87 743 aa16.64■□□□□ 0.25
CTSD-201ENST00000236671 SULF1Q8IWU6 871 aa16.64■□□□□ 0.25
CTSD-201ENST00000236671 PPM1KQ8N3J5 372 aa16.64■□□□□ 0.25
CTSD-201ENST00000236671 PSPC1Q8WXF1 523 aaKnown RBP16.64■□□□□ 0.25
CTSD-201ENST00000236671 SGSM3Q96HU1 749 aa16.64■□□□□ 0.25
CTSD-201ENST00000236671 TEPSINQ96N21 525 aa16.64■□□□□ 0.25
CTSD-201ENST00000236671 INTS9Q9NV88 658 aaKnown RBP16.64■□□□□ 0.25
CTSD-201ENST00000236671 GOLGA8IPA6NC78 632 aa16.63■□□□□ 0.25
CTSD-201ENST00000236671 GOLGA8JA6NMD2 632 aa16.63■□□□□ 0.25
CTSD-201ENST00000236671 TP73O15350 636 aa16.63■□□□□ 0.25
CTSD-201ENST00000236671 DNAJC8O75937 253 aaPredicted RBP16.63■□□□□ 0.25
CTSD-201ENST00000236671 ITGBL1O95965 494 aaPredicted RBP16.63■□□□□ 0.25
CTSD-201ENST00000236671 CYP11B1P15538 503 aa16.63■□□□□ 0.25
CTSD-201ENST00000236671 SNRPFP62306 86 aaKnown RBP16.63■□□□□ 0.25
CTSD-201ENST00000236671 MAP2K1Q02750 393 aaPredicted RBP16.63■□□□□ 0.25
CTSD-201ENST00000236671 SPP2Q13103 211 aa16.63■□□□□ 0.25
CTSD-201ENST00000236671 ZYXQ15942 572 aaKnown RBP16.63■□□□□ 0.25
CTSD-201ENST00000236671 SAMD1Q6SPF0 538 aaPredicted RBP16.63■□□□□ 0.25
CTSD-201ENST00000236671 PARP9Q8IXQ6 854 aa16.63■□□□□ 0.25
CTSD-201ENST00000236671 PRMT1Q99873 361 aaKnown RBP16.63■□□□□ 0.25
CTSD-201ENST00000236671 STMN4Q9H169 189 aaPredicted RBP16.63■□□□□ 0.25
CTSD-201ENST00000236671 LRRC19Q9H756 370 aa16.63■□□□□ 0.25
CTSD-201ENST00000236671 UVRAGQ9P2Y5 699 aa16.63■□□□□ 0.25
CTSD-201ENST00000236671 PGAP2Q9UHJ9 254 aa16.63■□□□□ 0.25
CTSD-201ENST00000236671 RASGRF2O14827 1237 aa16.63■□□□□ 0.25
CTSD-201ENST00000236671 LYPLA2O95372 231 aa16.63■□□□□ 0.25
CTSD-201ENST00000236671 ECEL1O95672 775 aa16.63■□□□□ 0.25
CTSD-201ENST00000236671 MFAP3P55082 362 aa16.63■□□□□ 0.25
CTSD-201ENST00000236671 NCKAP1LP55160 1127 aa16.63■□□□□ 0.25
CTSD-201ENST00000236671 GSCP56915 257 aaPredicted RBP16.63■□□□□ 0.25
CTSD-201ENST00000236671 RWDD2BP57060 319 aa16.63■□□□□ 0.25
CTSD-201ENST00000236671 HTRA3P83110 453 aa16.63■□□□□ 0.25
CTSD-201ENST00000236671 CDR2Q01850 454 aa16.63■□□□□ 0.25
CTSD-201ENST00000236671 RNF207Q6ZRF8 634 aa16.63■□□□□ 0.25
CTSD-201ENST00000236671 CBWD2Q8IUF1 395 aa16.63■□□□□ 0.25
CTSD-201ENST00000236671 SLCO2A1Q92959 643 aa16.63■□□□□ 0.25
CTSD-201ENST00000236671 NCAPGQ9BPX3 1015 aa16.63■□□□□ 0.25
CTSD-201ENST00000236671 SH2D3AQ9BRG2 576 aa16.63■□□□□ 0.25
CTSD-201ENST00000236671 AGO4Q9HCK5 861 aaKnown RBP16.63■□□□□ 0.25
CTSD-201ENST00000236671 GPRC5CQ9NQ84 441 aa16.63■□□□□ 0.25
CTSD-201ENST00000236671 AAASQ9NRG9 546 aa16.63■□□□□ 0.25
CTSD-201ENST00000236671 BRCA2P51587 3418 aa16.62■□□□□ 0.25
CTSD-201ENST00000236671 TMEM150BA6NC51 233 aa16.62■□□□□ 0.25
CTSD-201ENST00000236671 SLC16A4O15374 487 aa16.62■□□□□ 0.25
CTSD-201ENST00000236671 ADSSP30520 456 aa16.62■□□□□ 0.25
CTSD-201ENST00000236671 QARSP47897 775 aaKnown RBP16.62■□□□□ 0.25
CTSD-201ENST00000236671 SNRNP35Q16560 246 aaKnown RBP16.62■□□□□ 0.25
CTSD-201ENST00000236671 NSMFQ6X4W1 530 aa16.62■□□□□ 0.25
CTSD-201ENST00000236671 NIPA1Q7RTP0 329 aa16.62■□□□□ 0.25
CTSD-201ENST00000236671 ANKS4BQ8N8V4 417 aa16.62■□□□□ 0.25
CTSD-201ENST00000236671 HELQQ8TDG4 1101 aa16.62■□□□□ 0.25
CTSD-201ENST00000236671 AGBL1Q96MI9 1066 aa16.62■□□□□ 0.25
CTSD-201ENST00000236671 POP1Q99575 1024 aaKnown RBP16.62■□□□□ 0.25
CTSD-201ENST00000236671 TMOD2Q9NZR1 351 aa16.62■□□□□ 0.25
CTSD-201ENST00000236671 FEM1BQ9UK73 627 aa16.62■□□□□ 0.25
CTSD-201ENST00000236671 ZNFX1Q9P2E3 1918 aaKnown RBP16.62■□□□□ 0.25
CTSD-201ENST00000236671 CLDN3O15551 220 aa16.61■□□□□ 0.25
CTSD-201ENST00000236671 DLATP10515 647 aaKnown RBP16.61■□□□□ 0.25
CTSD-201ENST00000236671 YWHABP31946 246 aaKnown RBP16.61■□□□□ 0.25
CTSD-201ENST00000236671 PEX3P56589 373 aa16.61■□□□□ 0.25
CTSD-201ENST00000236671 SNCBQ16143 134 aa16.61■□□□□ 0.25
CTSD-201ENST00000236671 CNGA2Q16280 664 aa16.61■□□□□ 0.25
CTSD-201ENST00000236671 TRMT10CQ7L0Y3 403 aaKnown RBP16.61■□□□□ 0.25
CTSD-201ENST00000236671 FAM228AQ86W67 206 aa16.61■□□□□ 0.25
CTSD-201ENST00000236671 CCDC25Q86WR0 208 aa16.61■□□□□ 0.25
CTSD-201ENST00000236671 ZC3H15Q8WU90 426 aaKnown RBP16.61■□□□□ 0.25
CTSD-201ENST00000236671 DDX1Q92499 740 aaKnown RBP16.61■□□□□ 0.25
CTSD-201ENST00000236671 CDCA5Q96FF9 252 aa16.61■□□□□ 0.25
CTSD-201ENST00000236671 DDX23Q9BUQ8 820 aaKnown RBP16.61■□□□□ 0.25
CTSD-201ENST00000236671 CDC42EP4Q9H3Q1 356 aaKnown RBP16.61■□□□□ 0.25
CTSD-201ENST00000236671 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.61■□□□□ 0.257e-17■□□□□ 10.2
CTSD-201ENST00000236671 COQ4Q9Y3A0 265 aa16.61■□□□□ 0.25
CTSD-201ENST00000236671 ZNF536O15090 1300 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms