RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 NR1D2Q14995 579 aa13.6□□□□□ -0.23
VAMP4-201ENST00000236192 PCGF5Q86SE9 256 aa13.6□□□□□ -0.23
VAMP4-201ENST00000236192 LPIN2Q92539 896 aa13.6□□□□□ -0.23
VAMP4-201ENST00000236192 PRPF18Q99633 342 aaKnown RBP13.6□□□□□ -0.23
VAMP4-201ENST00000236192 FOXP3Q9BZS1 431 aa13.6□□□□□ -0.23
VAMP4-201ENST00000236192 SEPT10Q9P0V9 454 aa13.6□□□□□ -0.23
VAMP4-201ENST00000236192 DNM3Q9UQ16 869 aa13.6□□□□□ -0.23
VAMP4-201ENST00000236192 COQ6Q9Y2Z9 468 aa13.6□□□□□ -0.23
VAMP4-201ENST00000236192 C1orf232A0A0U1RR37 186 aa13.6□□□□□ -0.23
VAMP4-201ENST00000236192 POTEB3A0JP26 581 aa13.6□□□□□ -0.23
VAMP4-201ENST00000236192 POTECB2RU33 542 aa13.6□□□□□ -0.23
VAMP4-201ENST00000236192 GOLGA8RI6L899 631 aa13.6□□□□□ -0.23
VAMP4-201ENST00000236192 SMARCA1P28370 1054 aa13.6□□□□□ -0.23
VAMP4-201ENST00000236192 PMLP29590 882 aa13.6□□□□□ -0.23
VAMP4-201ENST00000236192 COPAP53621 1224 aa13.6□□□□□ -0.23
VAMP4-201ENST00000236192 OVGP1Q12889 678 aa13.6□□□□□ -0.23
VAMP4-201ENST00000236192 POTEBQ6S5H4 581 aa13.6□□□□□ -0.23
VAMP4-201ENST00000236192 PDIK1LQ8N165 341 aa13.6□□□□□ -0.23
VAMP4-201ENST00000236192 OTUD5Q96G74 571 aa13.6□□□□□ -0.23
VAMP4-201ENST00000236192 CCDC195A0A1B0GUA6 201 aa13.6□□□□□ -0.23
VAMP4-201ENST00000236192 GOLGA8IPA6NC78 632 aa13.6□□□□□ -0.23
VAMP4-201ENST00000236192 NUDT17P0C025 328 aa13.6□□□□□ -0.23
VAMP4-201ENST00000236192 DLATP10515 647 aaKnown RBP13.6□□□□□ -0.23
VAMP4-201ENST00000236192 GARSP41250 739 aaKnown RBP13.6□□□□□ -0.23
VAMP4-201ENST00000236192 INPP1P49441 399 aa13.6□□□□□ -0.23
VAMP4-201ENST00000236192 RASA2Q15283 850 aa13.6□□□□□ -0.23
VAMP4-201ENST00000236192 LMBRD2Q68DH5 695 aaPredicted RBP13.6□□□□□ -0.23
VAMP4-201ENST00000236192 FBXO25Q8TCJ0 367 aa13.6□□□□□ -0.23
VAMP4-201ENST00000236192 ARHGEF37A1IGU5 675 aa13.59□□□□□ -0.23
VAMP4-201ENST00000236192 RHOBTB3O94955 611 aa13.59□□□□□ -0.23
VAMP4-201ENST00000236192 ATP2C1P98194 919 aaPredicted RBP13.59□□□□□ -0.23
VAMP4-201ENST00000236192 RSBN1Q5VWQ0 802 aaPredicted RBP13.59□□□□□ -0.23
VAMP4-201ENST00000236192 DCUN1D2Q6PH85 259 aa13.59□□□□□ -0.23
VAMP4-201ENST00000236192 KCNH5Q8NCM2 988 aa13.59□□□□□ -0.23
VAMP4-201ENST00000236192 GLG1Q92896 1179 aa13.59□□□□□ -0.23
VAMP4-201ENST00000236192 POLR3CQ9BUI4 534 aaPredicted RBP13.59□□□□□ -0.23
VAMP4-201ENST00000236192 TMEM120AQ9BXJ8 343 aa13.59□□□□□ -0.23
VAMP4-201ENST00000236192 STK33Q9BYT3 514 aa13.59□□□□□ -0.23
VAMP4-201ENST00000236192 SEMA4AQ9H3S1 761 aa13.59□□□□□ -0.23
VAMP4-201ENST00000236192 NOL6Q9H6R4 1146 aaKnown RBP13.59□□□□□ -0.23
VAMP4-201ENST00000236192 AGAP1Q9UPQ3 857 aa13.59□□□□□ -0.23
VAMP4-201ENST00000236192 TELO2Q9Y4R8 837 aa13.59□□□□□ -0.23
VAMP4-201ENST00000236192 PFASO15067 1338 aa13.59□□□□□ -0.23
VAMP4-201ENST00000236192 GPC5P78333 572 aa13.59□□□□□ -0.23
VAMP4-201ENST00000236192 TUBA3CQ13748 450 aa13.59□□□□□ -0.23
VAMP4-201ENST00000236192 WDR44Q5JSH3 913 aa13.59□□□□□ -0.23
VAMP4-201ENST00000236192 CASC4Q6P4E1 433 aa13.59□□□□□ -0.23
VAMP4-201ENST00000236192 TLK2Q86UE8 772 aa13.59□□□□□ -0.23
VAMP4-201ENST00000236192 FOXP4Q8IVH2 680 aaPredicted RBP13.59□□□□□ -0.23
VAMP4-201ENST00000236192 CDKL2Q92772 493 aa13.59□□□□□ -0.23
VAMP4-201ENST00000236192 ACAP3Q96P50 834 aa13.59□□□□□ -0.23
VAMP4-201ENST00000236192 DDX3XO00571 662 aaKnown RBP eCLIP13.59□□□□□ -0.238e-6■■■■□ 25.2
VAMP4-201ENST00000236192 BCL10O95999 233 aa13.59□□□□□ -0.23
VAMP4-201ENST00000236192 SPIDRQ14159 915 aa13.59□□□□□ -0.23
VAMP4-201ENST00000236192 ILDR1Q86SU0 546 aaPredicted RBP13.59□□□□□ -0.23
VAMP4-201ENST00000236192 ZBED8Q8IZ13 594 aa13.59□□□□□ -0.23
VAMP4-201ENST00000236192 C1orf50Q9BV19 199 aa13.59□□□□□ -0.23
VAMP4-201ENST00000236192 OSBPL6Q9BZF3 934 aa13.59□□□□□ -0.23
VAMP4-201ENST00000236192 CYLDQ9NQC7 956 aa13.59□□□□□ -0.23
VAMP4-201ENST00000236192 LRRC7Q96NW7 1537 aa13.59□□□□□ -0.23
VAMP4-201ENST00000236192 C16orf96A6NNT2 1141 aa13.59□□□□□ -0.23
VAMP4-201ENST00000236192 H0Y626 953 aa13.59□□□□□ -0.23
VAMP4-201ENST00000236192 C4orf50Q6ZRC1 276 aa13.59□□□□□ -0.23
VAMP4-201ENST00000236192 PHC3Q8NDX5 983 aa13.59□□□□□ -0.23
VAMP4-201ENST00000236192 TPCN2Q8NHX9 752 aa13.59□□□□□ -0.23
VAMP4-201ENST00000236192 MTMR8Q96EF0 704 aa13.59□□□□□ -0.23
VAMP4-201ENST00000236192 EHMT1Q9H9B1 1298 aa13.59□□□□□ -0.23
VAMP4-201ENST00000236192 ARHGEF10LQ9HCE6 1279 aa13.59□□□□□ -0.23
VAMP4-201ENST00000236192 STMN3Q9NZ72 180 aa13.59□□□□□ -0.23
VAMP4-201ENST00000236192 ARHGAP20Q9P2F6 1191 aa13.59□□□□□ -0.23
VAMP4-201ENST00000236192 PCDHGA4Q9Y5G9 962 aa13.59□□□□□ -0.23
VAMP4-201ENST00000236192 ORC6Q9Y5N6 252 aa13.59□□□□□ -0.23
VAMP4-201ENST00000236192 POGZQ7Z3K3 1410 aa13.58□□□□□ -0.23
VAMP4-201ENST00000236192 PVALEFA0A1B0GWK0 134 aa13.58□□□□□ -0.24
VAMP4-201ENST00000236192 KRT7P08729 469 aa13.58□□□□□ -0.24
VAMP4-201ENST00000236192 MYL7Q01449 175 aa13.58□□□□□ -0.24
VAMP4-201ENST00000236192 BBS9Q3SYG4 887 aa13.58□□□□□ -0.24
VAMP4-201ENST00000236192 RSPH3Q86UC2 560 aa13.58□□□□□ -0.24
VAMP4-201ENST00000236192 HEATR4Q86WZ0 1026 aa13.58□□□□□ -0.24
VAMP4-201ENST00000236192 PBXIP1Q96AQ6 731 aa13.58□□□□□ -0.24
VAMP4-201ENST00000236192 MYRFQ9Y2G1 1151 aa13.58□□□□□ -0.24
VAMP4-201ENST00000236192 ABCC10Q5T3U5 1492 aa13.58□□□□□ -0.24
VAMP4-201ENST00000236192 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.58□□□□□ -0.24
VAMP4-201ENST00000236192 M0R3G1 203 aa13.58□□□□□ -0.24
VAMP4-201ENST00000236192 GPC4O75487 556 aa13.58□□□□□ -0.24
VAMP4-201ENST00000236192 ALOX5P09917 674 aa13.58□□□□□ -0.24
VAMP4-201ENST00000236192 OTUD4Q01804 1114 aaKnown RBP13.58□□□□□ -0.24
VAMP4-201ENST00000236192 C6orf183Q5T699 404 aa13.58□□□□□ -0.24
VAMP4-201ENST00000236192 FAM228AQ86W67 206 aa13.58□□□□□ -0.24
VAMP4-201ENST00000236192 ZNF786Q8N393 782 aa13.58□□□□□ -0.24
VAMP4-201ENST00000236192 ZC3H15Q8WU90 426 aaKnown RBP13.58□□□□□ -0.24
VAMP4-201ENST00000236192 DACT3Q96B18 629 aaPredicted RBP13.58□□□□□ -0.24
VAMP4-201ENST00000236192 RMND5BQ96G75 393 aaPredicted RBP13.58□□□□□ -0.24
VAMP4-201ENST00000236192 ZBED4O75132 1171 aa13.58□□□□□ -0.24
VAMP4-201ENST00000236192 NSFP46459 744 aaKnown RBP13.58□□□□□ -0.24
VAMP4-201ENST00000236192 MXI1P50539 228 aa13.58□□□□□ -0.24
VAMP4-201ENST00000236192 CLCN2P51788 898 aa13.58□□□□□ -0.24
VAMP4-201ENST00000236192 ACAP1Q15027 740 aa13.58□□□□□ -0.24
VAMP4-201ENST00000236192 CMPK2Q5EBM0 449 aa13.58□□□□□ -0.24
VAMP4-201ENST00000236192 DHDDSQ86SQ9 333 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms