RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 CGRRF1Q99675 332 aa20.12■□□□□ 0.81
SNX17-201ENST00000233575 TSEN34Q9BSV6 310 aaKnown RBP20.12■□□□□ 0.81
SNX17-201ENST00000233575 OSBPL7Q9BZF2 842 aa20.12■□□□□ 0.81
SNX17-201ENST00000233575 PAK6Q9NQU5 681 aaPredicted RBP20.12■□□□□ 0.81
SNX17-201ENST00000233575 APEX2Q9UBZ4 518 aa20.12■□□□□ 0.81
SNX17-201ENST00000233575 COQ4Q9Y3A0 265 aa20.12■□□□□ 0.81
SNX17-201ENST00000233575 HNRNPH3P31942 346 aaKnown RBP20.12■□□□□ 0.81
SNX17-201ENST00000233575 CETN1Q12798 172 aa20.12■□□□□ 0.81
SNX17-201ENST00000233575 TSR1Q2NL82 804 aaKnown RBP20.12■□□□□ 0.81
SNX17-201ENST00000233575 ZACNQ401N2 412 aa20.12■□□□□ 0.81
SNX17-201ENST00000233575 TMTC1Q8IUR5 882 aa20.12■□□□□ 0.81
SNX17-201ENST00000233575 DHX38Q92620 1227 aaKnown RBP20.12■□□□□ 0.81
SNX17-201ENST00000233575 EIF2AQ9BY44 585 aaKnown RBP20.12■□□□□ 0.81
SNX17-201ENST00000233575 DNAJC12Q9UKB3 198 aa20.12■□□□□ 0.81
SNX17-201ENST00000233575 NOC2LQ9Y3T9 749 aaKnown RBP20.12■□□□□ 0.81
SNX17-201ENST00000233575 NPTXRO95502 500 aa20.11■□□□□ 0.81
SNX17-201ENST00000233575 FAM228AQ86W67 206 aa20.11■□□□□ 0.81
SNX17-201ENST00000233575 ARRDC4Q8NCT1 418 aa20.11■□□□□ 0.81
SNX17-201ENST00000233575 FBXL13Q8NEE6 735 aa20.11■□□□□ 0.81
SNX17-201ENST00000233575 PI4K2AQ9BTU6 479 aa20.11■□□□□ 0.81
SNX17-201ENST00000233575 ARHGAP20Q9P2F6 1191 aa20.11■□□□□ 0.81
SNX17-201ENST00000233575 FBXL5Q9UKA1 691 aa20.11■□□□□ 0.81
SNX17-201ENST00000233575 TRPV2Q9Y5S1 764 aa20.11■□□□□ 0.81
SNX17-201ENST00000233575 VNN1O95497 513 aa20.1■□□□□ 0.81
SNX17-201ENST00000233575 THPOP40225 353 aa20.1■□□□□ 0.81
SNX17-201ENST00000233575 JAM2P57087 298 aa20.1■□□□□ 0.81
SNX17-201ENST00000233575 ARID5AQ03989 594 aa20.1■□□□□ 0.81
SNX17-201ENST00000233575 EFCAB13Q8IY85 973 aa20.1■□□□□ 0.81
SNX17-201ENST00000233575 CCAR2Q8N163 923 aaKnown RBP20.1■□□□□ 0.81
SNX17-201ENST00000233575 TMEM130Q8N3G9 435 aa20.1■□□□□ 0.81
SNX17-201ENST00000233575 KAT5Q92993 513 aa20.1■□□□□ 0.81
SNX17-201ENST00000233575 SPAG5Q96R06 1193 aa20.1■□□□□ 0.81
SNX17-201ENST00000233575 RNF208Q9H0X6 261 aa20.1■□□□□ 0.81
SNX17-201ENST00000233575 TRPV6Q9H1D0 765 aa20.1■□□□□ 0.81
SNX17-201ENST00000233575 RPF1Q9H9Y2 349 aaKnown RBP20.1■□□□□ 0.81
SNX17-201ENST00000233575 STARD7Q9NQZ5 370 aa20.1■□□□□ 0.81
SNX17-201ENST00000233575 ZNHIT6Q9NWK9 470 aaKnown RBP20.1■□□□□ 0.81
SNX17-201ENST00000233575 RAB20Q9NX57 234 aa20.1■□□□□ 0.81
SNX17-201ENST00000233575 PIN4Q9Y237 131 aaKnown RBP20.1■□□□□ 0.81
SNX17-201ENST00000233575 CCL5P13501 91 aa20.1■□□□□ 0.81
SNX17-201ENST00000233575 KCNJ6P48051 423 aa20.1■□□□□ 0.81
SNX17-201ENST00000233575 MGAT3Q09327 533 aa20.1■□□□□ 0.81
SNX17-201ENST00000233575 BIRC3Q13489 604 aa20.1■□□□□ 0.81
SNX17-201ENST00000233575 HSP90AA2PQ14568 343 aaPredicted RBP20.1■□□□□ 0.81
SNX17-201ENST00000233575 SFMBT2Q5VUG0 894 aa20.1■□□□□ 0.81
SNX17-201ENST00000233575 HGSNATQ68CP4 663 aa20.1■□□□□ 0.81
SNX17-201ENST00000233575 NOTUMQ6P988 496 aa20.1■□□□□ 0.81
SNX17-201ENST00000233575 RSPH3Q86UC2 560 aa20.1■□□□□ 0.81
SNX17-201ENST00000233575 ADPGKQ9BRR6 497 aa20.1■□□□□ 0.81
SNX17-201ENST00000233575 MTMR12Q9C0I1 747 aa20.1■□□□□ 0.81
SNX17-201ENST00000233575 GPR88Q9GZN0 384 aa20.1■□□□□ 0.81
SNX17-201ENST00000233575 SENP6Q9GZR1 1112 aaPredicted RBP20.1■□□□□ 0.81
SNX17-201ENST00000233575 HES2Q9Y543 173 aa20.1■□□□□ 0.81
SNX17-201ENST00000233575 M0QZ92 97 aa20.09■□□□□ 0.81
SNX17-201ENST00000233575 SLC27A1Q6PCB7 646 aa20.09■□□□□ 0.81
SNX17-201ENST00000233575 RPAINQ86UA6 219 aa20.09■□□□□ 0.81
SNX17-201ENST00000233575 WDR49Q8IV35 697 aa20.09■□□□□ 0.81
SNX17-201ENST00000233575 CXCL16Q9H2A7 254 aa20.09■□□□□ 0.81
SNX17-201ENST00000233575 UBE2TQ9NPD8 197 aaPredicted RBP20.09■□□□□ 0.81
SNX17-201ENST00000233575 PHF24Q9UPV7 400 aa20.09■□□□□ 0.81
SNX17-201ENST00000233575 NOD1Q9Y239 953 aa20.09■□□□□ 0.81
SNX17-201ENST00000233575 LACTBL1A8MY62 500 aa20.09■□□□□ 0.81
SNX17-201ENST00000233575 KBTBD13C9JR72 458 aa20.09■□□□□ 0.81
SNX17-201ENST00000233575 B4GALT4O60513 344 aa20.09■□□□□ 0.81
SNX17-201ENST00000233575 CLTAP09496 248 aa20.09■□□□□ 0.81
SNX17-201ENST00000233575 NCBP1Q09161 790 aaKnown RBP20.09■□□□□ 0.81
SNX17-201ENST00000233575 DRAP1Q14919 205 aaPredicted RBP20.09■□□□□ 0.81
SNX17-201ENST00000233575 PCBP1Q15365 356 aaKnown RBP eCLIP20.09■□□□□ 0.814e-22■■■■■ 62.2
SNX17-201ENST00000233575 ARHGAP44Q17R89 818 aa20.09■□□□□ 0.81
SNX17-201ENST00000233575 SLC10A6Q3KNW5 377 aa20.09■□□□□ 0.81
SNX17-201ENST00000233575 ACRBPQ8NEB7 543 aa20.09■□□□□ 0.81
SNX17-201ENST00000233575 NHEJ1Q9H9Q4 299 aaPredicted RBP20.09■□□□□ 0.81
SNX17-201ENST00000233575 SPTLC3Q9NUV7 552 aa20.09■□□□□ 0.81
SNX17-201ENST00000233575 A0A0U1RQJ8 604 aa20.08■□□□□ 0.8
SNX17-201ENST00000233575 HLA-DRAP01903 254 aa20.08■□□□□ 0.8
SNX17-201ENST00000233575 NFICP08651 508 aa20.08■□□□□ 0.8
SNX17-201ENST00000233575 TFAMQ00059 246 aaKnown RBP20.08■□□□□ 0.8
SNX17-201ENST00000233575 PTPN11Q06124 597 aaPredicted RBP20.08■□□□□ 0.8
SNX17-201ENST00000233575 TRIM71Q2Q1W2 868 aaKnown RBP20.08■□□□□ 0.8
SNX17-201ENST00000233575 SLC43A3Q8NBI5 491 aa20.08■□□□□ 0.8
SNX17-201ENST00000233575 ATRIPQ8WXE1 791 aa20.08■□□□□ 0.8
SNX17-201ENST00000233575 TATDN2Q93075 761 aa20.08■□□□□ 0.8
SNX17-201ENST00000233575 AIPL1Q9NZN9 384 aa20.08■□□□□ 0.8
SNX17-201ENST00000233575 F8VZ95 297 aa20.07■□□□□ 0.8
SNX17-201ENST00000233575 PIK3CAP42336 1068 aa20.07■□□□□ 0.8
SNX17-201ENST00000233575 CDK17Q00537 523 aa20.07■□□□□ 0.8
SNX17-201ENST00000233575 PTK7Q13308 1070 aa20.07■□□□□ 0.8
SNX17-201ENST00000233575 DCAF4L1Q3SXM0 396 aa20.07■□□□□ 0.8
SNX17-201ENST00000233575 UBXN11Q5T124 520 aa20.07■□□□□ 0.8
SNX17-201ENST00000233575 SPOPLQ6IQ16 392 aa20.07■□□□□ 0.8
SNX17-201ENST00000233575 ZNF710Q8N1W2 664 aa20.07■□□□□ 0.8
SNX17-201ENST00000233575 SYN2Q92777 582 aaPredicted RBP20.07■□□□□ 0.8
SNX17-201ENST00000233575 KREMEN1Q96MU8 473 aa20.07■□□□□ 0.8
SNX17-201ENST00000233575 STK33Q9BYT3 514 aa20.07■□□□□ 0.8
SNX17-201ENST00000233575 NXF3Q9H4D5 531 aaKnown RBP20.07■□□□□ 0.8
SNX17-201ENST00000233575 SNTG2Q9NY99 539 aa20.07■□□□□ 0.8
SNX17-201ENST00000233575 PPP2R2CQ9Y2T4 447 aa20.07■□□□□ 0.8
SNX17-201ENST00000233575 CITO14578 2027 aa20.07■□□□□ 0.8
SNX17-201ENST00000233575 TRIP11Q15643 1979 aa20.07■□□□□ 0.8
SNX17-201ENST00000233575 MROH7Q68CQ1 1323 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms