RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 TLR9Q9NR96 1032 aa15.03■□□□□ -0
VEGFA-201ENST00000230480 AAASQ9NRG9 546 aa15.03■□□□□ -0
VEGFA-201ENST00000230480 CLEC1BQ9P126 229 aa15.03■□□□□ -0
VEGFA-201ENST00000230480 KCNG1Q9UIX4 513 aa15.03■□□□□ -0
VEGFA-201ENST00000230480 PLXNA3P51805 1871 aa15.02■□□□□ -0
VEGFA-201ENST00000230480 TTC26A0AVF1 554 aa15.02■□□□□ -0
VEGFA-201ENST00000230480 TBX10O75333 385 aa15.02■□□□□ -0
VEGFA-201ENST00000230480 TBCAO75347 108 aaKnown RBP15.02■□□□□ -0
VEGFA-201ENST00000230480 PRPF6O94906 941 aaKnown RBP15.02■□□□□ -0
VEGFA-201ENST00000230480 ALDH2P05091 517 aa15.02■□□□□ -0
VEGFA-201ENST00000230480 IDEP14735 1019 aa15.02■□□□□ -0
VEGFA-201ENST00000230480 KCNE1P15382 129 aa15.02■□□□□ -0
VEGFA-201ENST00000230480 GAP43P17677 238 aa15.02■□□□□ -0
VEGFA-201ENST00000230480 AFMP43652 599 aa15.02■□□□□ -0
VEGFA-201ENST00000230480 ALDH7A1P49419 539 aaKnown RBP15.02■□□□□ -0
VEGFA-201ENST00000230480 KCNQ1P51787 676 aa15.02■□□□□ -0
VEGFA-201ENST00000230480 GRIK3Q13003 919 aa15.02■□□□□ -0
VEGFA-201ENST00000230480 SNW1Q13573 536 aaKnown RBP15.02■□□□□ -0
VEGFA-201ENST00000230480 ENOX2Q16206 610 aaKnown RBP15.02■□□□□ -0
VEGFA-201ENST00000230480 CSPP1Q1MSJ5 1256 aa15.02■□□□□ -0
VEGFA-201ENST00000230480 HERC4Q5GLZ8 1057 aaPredicted RBP15.02■□□□□ -0
VEGFA-201ENST00000230480 MRPL43Q8N983 215 aaKnown RBP15.02■□□□□ -0
VEGFA-201ENST00000230480 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.02■□□□□ -0
VEGFA-201ENST00000230480 URGCPQ8TCY9 931 aa15.02■□□□□ -0
VEGFA-201ENST00000230480 C18orf25Q96B23 403 aaPredicted RBP15.02■□□□□ -0
VEGFA-201ENST00000230480 SCAND2PQ9GZW5 306 aaPredicted RBP15.02■□□□□ -0
VEGFA-201ENST00000230480 CHST7Q9NS84 486 aa15.02■□□□□ -0
VEGFA-201ENST00000230480 CNTN3Q9P232 1028 aa15.02■□□□□ -0
VEGFA-201ENST00000230480 SEL1LQ9UBV2 794 aa15.02■□□□□ -0
VEGFA-201ENST00000230480 CPSF3Q9UKF6 684 aaKnown RBP15.02■□□□□ -0
VEGFA-201ENST00000230480 FAN1Q9Y2M0 1017 aa15.02■□□□□ -0
VEGFA-201ENST00000230480 PRG3Q9Y2Y8 225 aaPredicted RBP15.02■□□□□ -0
VEGFA-201ENST00000230480 C5orf42Q9H799 3197 aa15.02□□□□□ -0.01
VEGFA-201ENST00000230480 TGFB1I1O43294 461 aa15.01□□□□□ -0.01
VEGFA-201ENST00000230480 CTSAP10619 480 aa15.01□□□□□ -0.01
VEGFA-201ENST00000230480 HARSP12081 509 aaKnown RBP15.01□□□□□ -0.01
VEGFA-201ENST00000230480 PPM1AP35813 382 aa15.01□□□□□ -0.01
VEGFA-201ENST00000230480 RNASELQ05823 741 aaKnown RBP15.01□□□□□ -0.01
VEGFA-201ENST00000230480 STRN3Q13033 797 aa15.01□□□□□ -0.01
VEGFA-201ENST00000230480 TUSC3Q13454 348 aa15.01□□□□□ -0.01
VEGFA-201ENST00000230480 NOLC1Q14978 699 aaKnown RBP eCLIP15.01□□□□□ -0.01
VEGFA-201ENST00000230480 DUSP6Q16828 381 aa15.01□□□□□ -0.01
VEGFA-201ENST00000230480 TIGD5Q53EQ6 642 aa15.01□□□□□ -0.01
VEGFA-201ENST00000230480 L1TD1Q5T7N2 865 aaKnown RBP15.01□□□□□ -0.01
VEGFA-201ENST00000230480 KIAA0319Q5VV43 1072 aa15.01□□□□□ -0.01
VEGFA-201ENST00000230480 UNC13DQ70J99 1090 aa15.01□□□□□ -0.01
VEGFA-201ENST00000230480 RBM23Q86U06 439 aaKnown RBP15.01□□□□□ -0.01
VEGFA-201ENST00000230480 FMR1NBQ8N0W7 255 aaPredicted RBP15.01□□□□□ -0.01
VEGFA-201ENST00000230480 VPS52Q8N1B4 723 aa15.01□□□□□ -0.01
VEGFA-201ENST00000230480 ZNF507Q8TCN5 953 aa15.01□□□□□ -0.01
VEGFA-201ENST00000230480 SCFD1Q8WVM8 642 aa15.01□□□□□ -0.01
VEGFA-201ENST00000230480 PABPC5Q96DU9 382 aaKnown RBP15.01□□□□□ -0.01
VEGFA-201ENST00000230480 MSLNLQ96KJ4 702 aa15.01□□□□□ -0.01
VEGFA-201ENST00000230480 B3GALT6Q96L58 329 aa15.01□□□□□ -0.01
VEGFA-201ENST00000230480 TCF25Q9BQ70 676 aa15.01□□□□□ -0.01
VEGFA-201ENST00000230480 ADPGKQ9BRR6 497 aa15.01□□□□□ -0.01
VEGFA-201ENST00000230480 COL25A1Q9BXS0 654 aaPredicted RBP15.01□□□□□ -0.01
VEGFA-201ENST00000230480 UBE2ZQ9H832 354 aaPredicted RBP15.01□□□□□ -0.01
VEGFA-201ENST00000230480 MRPL44Q9H9J2 332 aaKnown RBP15.01□□□□□ -0.01
VEGFA-201ENST00000230480 FAM13BQ9NYF5 915 aa15.01□□□□□ -0.01
VEGFA-201ENST00000230480 ANKFY1Q9P2R3 1169 aa15.01□□□□□ -0.01
VEGFA-201ENST00000230480 IRAK3Q9Y616 596 aa15.01□□□□□ -0.01
VEGFA-201ENST00000230480 MTCL1Q9Y4B5 1905 aaKnown RBP15.01□□□□□ -0.01
VEGFA-201ENST00000230480 CASTOR2A6NHX0 329 aa15□□□□□ -0.01
VEGFA-201ENST00000230480 LACTBL1A8MY62 500 aa15□□□□□ -0.01
VEGFA-201ENST00000230480 H0YCG3 227 aa15□□□□□ -0.01
VEGFA-201ENST00000230480 CLDN3O15551 220 aa15□□□□□ -0.01
VEGFA-201ENST00000230480 GADD45BO75293 160 aaPredicted RBP15□□□□□ -0.01
VEGFA-201ENST00000230480 KIF4AO95239 1232 aa15□□□□□ -0.01
VEGFA-201ENST00000230480 CXCL8P10145 99 aa15□□□□□ -0.01
VEGFA-201ENST00000230480 OR1G1P47890 313 aa15□□□□□ -0.01
VEGFA-201ENST00000230480 NRIP1P48552 1158 aa15□□□□□ -0.01
VEGFA-201ENST00000230480 SPAG1Q07617 926 aa15□□□□□ -0.01
VEGFA-201ENST00000230480 PTPN14Q15678 1187 aa15□□□□□ -0.01
VEGFA-201ENST00000230480 UPP1Q16831 310 aa15□□□□□ -0.01
VEGFA-201ENST00000230480 PLPP4Q5VZY2 271 aa15□□□□□ -0.01
VEGFA-201ENST00000230480 EFHBQ8N7U6 833 aa15□□□□□ -0.01
VEGFA-201ENST00000230480 FSIP1Q8NA03 581 aa15□□□□□ -0.01
VEGFA-201ENST00000230480 SLC22A17Q8WUG5 538 aa15□□□□□ -0.01
VEGFA-201ENST00000230480 FAM84AQ96KN4 292 aa15□□□□□ -0.01
VEGFA-201ENST00000230480 ACAP3Q96P50 834 aa15□□□□□ -0.01
VEGFA-201ENST00000230480 TCHPQ9BT92 498 aa15□□□□□ -0.01
VEGFA-201ENST00000230480 CIZ1Q9ULV3 898 aaPredicted RBP15□□□□□ -0.01
VEGFA-201ENST00000230480 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.99□□□□□ -0.01
VEGFA-201ENST00000230480 HNRNPDLO14979 420 aaKnown RBP14.99□□□□□ -0.01
VEGFA-201ENST00000230480 OGTO15294 1046 aa14.99□□□□□ -0.01
VEGFA-201ENST00000230480 CLASP2O75122 1294 aaKnown RBP14.99□□□□□ -0.01
VEGFA-201ENST00000230480 THP07101 528 aa14.99□□□□□ -0.01
VEGFA-201ENST00000230480 SCP2P22307 547 aa14.99□□□□□ -0.01
VEGFA-201ENST00000230480 ACOT2P49753 483 aa14.99□□□□□ -0.01
VEGFA-201ENST00000230480 LIG4P49917 911 aa14.99□□□□□ -0.01
VEGFA-201ENST00000230480 CLCNKBP51801 687 aa14.99□□□□□ -0.01
VEGFA-201ENST00000230480 GUCY2FP51841 1108 aa14.99□□□□□ -0.01
VEGFA-201ENST00000230480 DPYDQ12882 1025 aa14.99□□□□□ -0.01
VEGFA-201ENST00000230480 STK4Q13043 487 aa14.99□□□□□ -0.01
VEGFA-201ENST00000230480 TMEM132AQ24JP5 1023 aa14.99□□□□□ -0.01
VEGFA-201ENST00000230480 TMEM184AQ6ZMB5 413 aa14.99□□□□□ -0.01
VEGFA-201ENST00000230480 KRBA2Q6ZNG9 492 aa14.99□□□□□ -0.01
VEGFA-201ENST00000230480 KIAA0895Q8NCT3 520 aa14.99□□□□□ -0.01
VEGFA-201ENST00000230480 HLA-CQ95604 372 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms