RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 PWWP2AQ96N64 755 aa14.58□□□□□ -0.08
NFKB1-201ENST00000226574 NRBP2Q9NSY0 501 aa14.58□□□□□ -0.08
NFKB1-201ENST00000226574 RBAKQ9NYW8 714 aaPredicted RBP14.58□□□□□ -0.08
NFKB1-201ENST00000226574 CTNNAL1Q9UBT7 734 aa14.58□□□□□ -0.08
NFKB1-201ENST00000226574 CHMP2BQ9UQN3 213 aa14.58□□□□□ -0.08
NFKB1-201ENST00000226574 NEURL4Q96JN8 1562 aa14.58□□□□□ -0.08
NFKB1-201ENST00000226574 CCDC78A2IDD5 438 aa14.58□□□□□ -0.08
NFKB1-201ENST00000226574 PYGMP11217 842 aa14.58□□□□□ -0.08
NFKB1-201ENST00000226574 MARCKSL1P49006 195 aa14.58□□□□□ -0.08
NFKB1-201ENST00000226574 SLC12A2P55011 1212 aa14.58□□□□□ -0.08
NFKB1-201ENST00000226574 PSMC1P62191 440 aaKnown RBP14.58□□□□□ -0.08
NFKB1-201ENST00000226574 SEPT12Q8IYM1 358 aa14.58□□□□□ -0.08
NFKB1-201ENST00000226574 DDX27Q96GQ7 796 aaKnown RBP14.58□□□□□ -0.08
NFKB1-201ENST00000226574 TRAIPQ9BWF2 469 aa14.58□□□□□ -0.08
NFKB1-201ENST00000226574 STOML1Q9UBI4 398 aa14.58□□□□□ -0.08
NFKB1-201ENST00000226574 RIC1Q4ADV7 1423 aa14.58□□□□□ -0.08
NFKB1-201ENST00000226574 PFASO15067 1338 aa14.58□□□□□ -0.08
NFKB1-201ENST00000226574 PITPNM2Q9BZ72 1349 aa14.58□□□□□ -0.08
NFKB1-201ENST00000226574 DLG5Q8TDM6 1919 aa14.57□□□□□ -0.08
NFKB1-201ENST00000226574 FAM47DPA6NHR8 397 aa14.57□□□□□ -0.08
NFKB1-201ENST00000226574 DCDC2CA8MYV0 355 aa14.57□□□□□ -0.08
NFKB1-201ENST00000226574 ENO1P06733 434 aaKnown RBP14.57□□□□□ -0.08
NFKB1-201ENST00000226574 ECM1Q16610 540 aa14.57□□□□□ -0.08
NFKB1-201ENST00000226574 PRAMEF18Q5VWM3 479 aa14.57□□□□□ -0.08
NFKB1-201ENST00000226574 ACTRT1Q8TDG2 376 aa14.57□□□□□ -0.08
NFKB1-201ENST00000226574 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.57□□□□□ -0.08
NFKB1-201ENST00000226574 RUBCNQ92622 972 aa14.57□□□□□ -0.08
NFKB1-201ENST00000226574 ZSWIM1Q9BR11 485 aa14.57□□□□□ -0.08
NFKB1-201ENST00000226574 CLEC11AQ9Y240 323 aa14.57□□□□□ -0.08
NFKB1-201ENST00000226574 FAM86B1E9PN63 330 aa14.57□□□□□ -0.08
NFKB1-201ENST00000226574 EML1O00423 815 aa14.57□□□□□ -0.08
NFKB1-201ENST00000226574 CLGNO14967 610 aa14.57□□□□□ -0.08
NFKB1-201ENST00000226574 NKRFO15226 690 aaKnown RBP eCLIP14.57□□□□□ -0.08
NFKB1-201ENST00000226574 WEE2P0C1S8 567 aa14.57□□□□□ -0.08
NFKB1-201ENST00000226574 FAM86B2P0C5J1 330 aa14.57□□□□□ -0.08
NFKB1-201ENST00000226574 RRM1P23921 792 aa14.57□□□□□ -0.08
NFKB1-201ENST00000226574 CNGA1P29973 690 aa14.57□□□□□ -0.08
NFKB1-201ENST00000226574 RPL21P46778 160 aaKnown RBP14.57□□□□□ -0.08
NFKB1-201ENST00000226574 DRP2Q13474 957 aa14.57□□□□□ -0.08
NFKB1-201ENST00000226574 HIF1AQ16665 826 aa14.57□□□□□ -0.08
NFKB1-201ENST00000226574 KCNT1Q5JUK3 1230 aa14.57□□□□□ -0.08
NFKB1-201ENST00000226574 DAB2IPQ5VWQ8 1189 aa14.57□□□□□ -0.08
NFKB1-201ENST00000226574 PODNQ7Z5L7 613 aa14.57□□□□□ -0.08
NFKB1-201ENST00000226574 AKT3Q9Y243 479 aa14.57□□□□□ -0.08
NFKB1-201ENST00000226574 TULP2O00295 520 aa14.57□□□□□ -0.08
NFKB1-201ENST00000226574 ASNSP08243 561 aa14.57□□□□□ -0.08
NFKB1-201ENST00000226574 ASPHQ12797 758 aa14.57□□□□□ -0.08
NFKB1-201ENST00000226574 FAXCQ5TGI0 409 aa14.57□□□□□ -0.08
NFKB1-201ENST00000226574 GADL1Q6ZQY3 521 aa14.57□□□□□ -0.08
NFKB1-201ENST00000226574 C3orf62Q6ZUJ4 267 aa14.57□□□□□ -0.08
NFKB1-201ENST00000226574 MCEEQ96PE7 176 aa14.57□□□□□ -0.08
NFKB1-201ENST00000226574 NUF2Q9BZD4 464 aa14.57□□□□□ -0.08
NFKB1-201ENST00000226574 VPS11Q9H270 941 aa14.57□□□□□ -0.08
NFKB1-201ENST00000226574 RIOX1Q9H6W3 641 aa14.57□□□□□ -0.08
NFKB1-201ENST00000226574 METTL5Q9NRN9 209 aaKnown RBP14.57□□□□□ -0.08
NFKB1-201ENST00000226574 AIPL1Q9NZN9 384 aa14.57□□□□□ -0.08
NFKB1-201ENST00000226574 AGO2Q9UKV8 859 aaKnown RBP14.57□□□□□ -0.08
NFKB1-201ENST00000226574 FNDC3AQ9Y2H6 1198 aaKnown RBP14.57□□□□□ -0.08
NFKB1-201ENST00000226574 SCINQ9Y6U3 715 aa14.57□□□□□ -0.08
NFKB1-201ENST00000226574 DDTLA6NHG4 134 aaPredicted RBP14.56□□□□□ -0.08
NFKB1-201ENST00000226574 FOXO6A8MYZ6 492 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 TLR2O60603 784 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 CBWD6Q4V339 395 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 CBWD3Q5JTY5 395 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 CBWD5Q5RIA9 395 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 LVRNQ6Q4G3 990 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 PRUNE1Q86TP1 453 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 NT5DC3Q86UY8 548 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 FUKQ8N0W3 1084 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 RBM41Q96IZ5 413 aaKnown RBP14.56□□□□□ -0.08
NFKB1-201ENST00000226574 DDX4Q9NQI0 724 aaKnown RBP14.56□□□□□ -0.08
NFKB1-201ENST00000226574 ABCF3Q9NUQ8 709 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 IQANK1A0A1B0GTG1 560 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 SLC16A3O15427 465 aaKnown RBP14.56□□□□□ -0.08
NFKB1-201ENST00000226574 GJB6O95452 261 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 ITIH2P19823 946 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 PPATQ06203 517 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 ZFPM1Q8IX07 1006 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 ARMC2Q8NEN0 867 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 TAS1R2Q8TE23 839 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 TNFRSF25Q93038 417 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 ABTB1Q969K4 478 aaPredicted RBP14.56□□□□□ -0.08
NFKB1-201ENST00000226574 MIS12Q9H081 205 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 QTRT2Q9H974 415 aaKnown RBP14.56□□□□□ -0.08
NFKB1-201ENST00000226574 RNF146Q9NTX7 359 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 LOC100653049A0A140TA62 436 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 KRT34O76011 436 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 KRT37O76014 449 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 APRTP07741 180 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 NPR1P16066 1061 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 ORC1Q13415 861 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 BIRC2Q13490 618 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 QPCTQ16769 361 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 ANKRD20A8PQ5CZ79 823 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 SLC26A7Q8TE54 656 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 CDKL2Q92772 493 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 ANKRD36BP1Q96IX9 119 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 GDF3Q9NR23 364 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 KCNH7Q9NS40 1196 aa14.56□□□□□ -0.08
NFKB1-201ENST00000226574 GOLGA4Q13439 2230 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms