RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 CARD6Q9BX69 1037 aa16.06■□□□□ 0.16
CCDC47-201ENST00000225726 INTUQ9ULD6 942 aa16.06■□□□□ 0.16
CCDC47-201ENST00000225726 B4GALT5O43286 388 aa16.06■□□□□ 0.16
CCDC47-201ENST00000225726 TNFSF9P41273 254 aa16.06■□□□□ 0.16
CCDC47-201ENST00000225726 PIK3CAP42336 1068 aa16.06■□□□□ 0.16
CCDC47-201ENST00000225726 AMPD2Q01433 879 aa16.06■□□□□ 0.16
CCDC47-201ENST00000225726 GCNT1Q02742 428 aa16.06■□□□□ 0.16
CCDC47-201ENST00000225726 KAT2BQ92831 832 aa16.06■□□□□ 0.16
CCDC47-201ENST00000225726 LENG1Q96BZ8 264 aaPredicted RBP16.06■□□□□ 0.16
CCDC47-201ENST00000225726 KAT6AQ92794 2004 aa16.05■□□□□ 0.16
CCDC47-201ENST00000225726 SMIM10L2AP0DMW4 78 aa16.05■□□□□ 0.16
CCDC47-201ENST00000225726 SMIM10L2BP0DMW5 78 aa16.05■□□□□ 0.16
CCDC47-201ENST00000225726 SEZ6Q53EL9 994 aa16.05■□□□□ 0.16
CCDC47-201ENST00000225726 WDR44Q5JSH3 913 aa16.05■□□□□ 0.16
CCDC47-201ENST00000225726 CYP4F22Q6NT55 531 aa16.05■□□□□ 0.16
CCDC47-201ENST00000225726 ZNF410Q86VK4 478 aa16.05■□□□□ 0.16
CCDC47-201ENST00000225726 WDR49Q8IV35 697 aa16.05■□□□□ 0.16
CCDC47-201ENST00000225726 PACSIN1Q9BY11 444 aa16.05■□□□□ 0.16
CCDC47-201ENST00000225726 C1orf112Q9NSG2 853 aa16.05■□□□□ 0.16
CCDC47-201ENST00000225726 CAPN6Q9Y6Q1 641 aa16.05■□□□□ 0.16
CCDC47-201ENST00000225726 NRCAMQ92823 1304 aa16.05■□□□□ 0.16
CCDC47-201ENST00000225726 BIRC3Q13489 604 aa16.05■□□□□ 0.16
CCDC47-201ENST00000225726 MFSD10Q14728 455 aa16.05■□□□□ 0.16
CCDC47-201ENST00000225726 AMHR2Q16671 573 aa16.05■□□□□ 0.16
CCDC47-201ENST00000225726 PAPD7Q5XG87 772 aaKnown RBP16.05■□□□□ 0.16
CCDC47-201ENST00000225726 KIAA0319LQ8IZA0 1049 aa16.05■□□□□ 0.16
CCDC47-201ENST00000225726 U2AF1L4Q8WU68 220 aaKnown RBP16.05■□□□□ 0.16
CCDC47-201ENST00000225726 AGPAT1Q99943 283 aa16.05■□□□□ 0.16
CCDC47-201ENST00000225726 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.05■□□□□ 0.166e-6■■■□□ 15
CCDC47-201ENST00000225726 SETD4Q9NVD3 440 aa16.05■□□□□ 0.16
CCDC47-201ENST00000225726 VNN1O95497 513 aa16.04■□□□□ 0.16
CCDC47-201ENST00000225726 IQCF3P0C7M6 154 aa16.04■□□□□ 0.16
CCDC47-201ENST00000225726 TNFAIP3P21580 790 aa16.04■□□□□ 0.16
CCDC47-201ENST00000225726 NFRKBQ6P4R8 1299 aa16.04■□□□□ 0.16
CCDC47-201ENST00000225726 TRAPPC11Q7Z392 1133 aa16.04■□□□□ 0.16
CCDC47-201ENST00000225726 LMBR1Q8WVP7 490 aa16.04■□□□□ 0.16
CCDC47-201ENST00000225726 NLRP7Q8WX94 980 aa16.04■□□□□ 0.16
CCDC47-201ENST00000225726 TATDN2Q93075 761 aa16.04■□□□□ 0.16
CCDC47-201ENST00000225726 SALL4Q9UJQ4 1053 aa16.04■□□□□ 0.16
CCDC47-201ENST00000225726 ATP1A1P05023 1023 aaKnown RBP16.04■□□□□ 0.16
CCDC47-201ENST00000225726 PSEN2P49810 448 aa16.04■□□□□ 0.16
CCDC47-201ENST00000225726 WHAMMP3Q1A5X7 153 aa16.04■□□□□ 0.16
CCDC47-201ENST00000225726 EEF1DP3Q658K8 133 aa16.04■□□□□ 0.16
CCDC47-201ENST00000225726 SRGAP1Q7Z6B7 1085 aa16.04■□□□□ 0.16
CCDC47-201ENST00000225726 GLYCTKQ8IVS8 523 aa16.04■□□□□ 0.16
CCDC47-201ENST00000225726 CDT1Q9H211 546 aa16.04■□□□□ 0.16
CCDC47-201ENST00000225726 JRKLQ9Y4A0 524 aa16.04■□□□□ 0.16
CCDC47-201ENST00000225726 HAS3O00219 553 aa16.04■□□□□ 0.16
CCDC47-201ENST00000225726 AKR1A1P14550 325 aa16.04■□□□□ 0.16
CCDC47-201ENST00000225726 PSMC4P43686 418 aa16.04■□□□□ 0.16
CCDC47-201ENST00000225726 NOGQ13253 232 aa16.04■□□□□ 0.16
CCDC47-201ENST00000225726 LRRN4CLQ8ND94 238 aa16.04■□□□□ 0.16
CCDC47-201ENST00000225726 IPO4Q8TEX9 1081 aaKnown RBP16.04■□□□□ 0.16
CCDC47-201ENST00000225726 FAM84AQ96KN4 292 aa16.04■□□□□ 0.16
CCDC47-201ENST00000225726 PI4K2AQ9BTU6 479 aa16.04■□□□□ 0.16
CCDC47-201ENST00000225726 MYL3P08590 195 aa16.03■□□□□ 0.16
CCDC47-201ENST00000225726 H2AFZP0C0S5 128 aa16.03■□□□□ 0.16
CCDC47-201ENST00000225726 MCF2P10911 925 aa16.03■□□□□ 0.16
CCDC47-201ENST00000225726 LACTBP83111 547 aaPredicted RBP16.03■□□□□ 0.16
CCDC47-201ENST00000225726 CDC42EP1Q00587 391 aa16.03■□□□□ 0.16
CCDC47-201ENST00000225726 NCBP1Q09161 790 aaKnown RBP16.03■□□□□ 0.16
CCDC47-201ENST00000225726 H2AFVQ71UI9 128 aa16.03■□□□□ 0.16
CCDC47-201ENST00000225726 PPP1R16BQ96T49 567 aa16.03■□□□□ 0.16
CCDC47-201ENST00000225726 TADA3O75528 432 aa16.03■□□□□ 0.16
CCDC47-201ENST00000225726 USP8P40818 1118 aa16.03■□□□□ 0.16
CCDC47-201ENST00000225726 CEP112Q8N8E3 955 aa16.03■□□□□ 0.16
CCDC47-201ENST00000225726 OR5B17Q8NGF7 314 aa16.03■□□□□ 0.16
CCDC47-201ENST00000225726 SCLT1Q96NL6 688 aa16.03■□□□□ 0.16
CCDC47-201ENST00000225726 MBLAC1A4D2B0 266 aaPredicted RBP16.03■□□□□ 0.16
CCDC47-201ENST00000225726 ENC1O14682 589 aa16.03■□□□□ 0.16
CCDC47-201ENST00000225726 MFSD14CQ5VZR4 134 aa16.03■□□□□ 0.16
CCDC47-201ENST00000225726 KATNAL1Q9BW62 490 aa16.03■□□□□ 0.16
CCDC47-201ENST00000225726 ARHGAP39Q9C0H5 1083 aa16.03■□□□□ 0.16
CCDC47-201ENST00000225726 PDZD7Q9H5P4 517 aa16.03■□□□□ 0.16
CCDC47-201ENST00000225726 SMIM35A0A1B0GVV1 85 aa16.02■□□□□ 0.16
CCDC47-201ENST00000225726 EFCAB8A8MWE9 144 aa16.02■□□□□ 0.16
CCDC47-201ENST00000225726 BUB1O43683 1085 aa16.02■□□□□ 0.16
CCDC47-201ENST00000225726 IL18RAPO95256 599 aa16.02■□□□□ 0.16
CCDC47-201ENST00000225726 NAP1L1P55209 391 aaKnown RBP16.02■□□□□ 0.16
CCDC47-201ENST00000225726 ZNF771Q7L3S4 317 aaPredicted RBP16.02■□□□□ 0.16
CCDC47-201ENST00000225726 REM2Q8IYK8 340 aaPredicted RBP16.02■□□□□ 0.16
CCDC47-201ENST00000225726 THNSL1Q8IYQ7 743 aa16.02■□□□□ 0.16
CCDC47-201ENST00000225726 SLC20A1Q8WUM9 679 aa16.02■□□□□ 0.16
CCDC47-201ENST00000225726 TMEM51Q9NW97 253 aa16.02■□□□□ 0.16
CCDC47-201ENST00000225726 SAR1BQ9Y6B6 198 aa16.02■□□□□ 0.16
CCDC47-201ENST00000225726 A0A0A6YYK5 440 aaPredicted RBP16.02■□□□□ 0.15
CCDC47-201ENST00000225726 PHACTR2O75167 634 aa16.02■□□□□ 0.15
CCDC47-201ENST00000225726 TOMM70O94826 608 aa16.02■□□□□ 0.15
CCDC47-201ENST00000225726 SGPL1O95470 568 aa16.02■□□□□ 0.15
CCDC47-201ENST00000225726 POU5F1Q01860 360 aaKnown RBP16.02■□□□□ 0.15
CCDC47-201ENST00000225726 FSCN1Q16658 493 aaKnown RBP16.02■□□□□ 0.15
CCDC47-201ENST00000225726 KYAT1Q16773 422 aa16.02■□□□□ 0.15
CCDC47-201ENST00000225726 TRPV1Q8NER1 839 aa16.02■□□□□ 0.15
CCDC47-201ENST00000225726 NOCTQ9UK39 431 aaKnown RBP16.02■□□□□ 0.15
CCDC47-201ENST00000225726 ANK1P16157 1881 aa16.02■□□□□ 0.15
CCDC47-201ENST00000225726 CYP26A1O43174 497 aa16.02■□□□□ 0.15
CCDC47-201ENST00000225726 DUSP11O75319 330 aaKnown RBP16.02■□□□□ 0.15
CCDC47-201ENST00000225726 CYBAP13498 195 aa16.02■□□□□ 0.15
CCDC47-201ENST00000225726 CHMP4BP1P59074 171 aa16.02■□□□□ 0.15
CCDC47-201ENST00000225726 IFI16Q16666 785 aaKnown RBP16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms