RNA–Protein interactions for RNA: ENST00000225603.8

CBX1-201, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-201ENST00000225603 MEFVO15553 781 aaPredicted RBP19.54■□□□□ 0.72
CBX1-201ENST00000225603 TPM1P09493 284 aa19.54■□□□□ 0.72
CBX1-201ENST00000225603 MCF2P10911 925 aa19.54■□□□□ 0.72
CBX1-201ENST00000225603 CTCFP49711 727 aaPredicted RBP19.54■□□□□ 0.72
CBX1-201ENST00000225603 MNX1P50219 401 aaPredicted RBP19.54■□□□□ 0.72
CBX1-201ENST00000225603 PTK7Q13308 1070 aa19.54■□□□□ 0.72
CBX1-201ENST00000225603 ENOX2Q16206 610 aaKnown RBP19.54■□□□□ 0.72
CBX1-201ENST00000225603 FAM228AQ86W67 206 aa19.54■□□□□ 0.72
CBX1-201ENST00000225603 BRSK2Q8IWQ3 736 aa19.54■□□□□ 0.72
CBX1-201ENST00000225603 NUP58Q9BVL2 599 aa19.54■□□□□ 0.72
CBX1-201ENST00000225603 SIX2Q9NPC8 291 aa19.54■□□□□ 0.72
CBX1-201ENST00000225603 GTPBP10A4D1E9 387 aaKnown RBP19.53■□□□□ 0.72
CBX1-201ENST00000225603 TRIM14Q14142 442 aa19.53■□□□□ 0.72
CBX1-201ENST00000225603 MTF1Q14872 753 aa19.53■□□□□ 0.72
CBX1-201ENST00000225603 LMO3Q8TAP4 145 aa19.53■□□□□ 0.72
CBX1-201ENST00000225603 EIF2AQ9BY44 585 aaKnown RBP19.53■□□□□ 0.72
CBX1-201ENST00000225603 M0QZ92 97 aa19.53■□□□□ 0.72
CBX1-201ENST00000225603 FECHP22830 423 aa19.53■□□□□ 0.72
CBX1-201ENST00000225603 KRT9P35527 623 aa19.53■□□□□ 0.72
CBX1-201ENST00000225603 CLDN10P78369 228 aa19.53■□□□□ 0.72
CBX1-201ENST00000225603 FIGNQ5HY92 759 aa19.53■□□□□ 0.72
CBX1-201ENST00000225603 NEK11Q8NG66 645 aa19.53■□□□□ 0.72
CBX1-201ENST00000225603 DESI2Q9BSY9 194 aa19.53■□□□□ 0.72
CBX1-201ENST00000225603 GANQ9H2C0 597 aa19.53■□□□□ 0.72
CBX1-201ENST00000225603 FANCGO15287 622 aa19.52■□□□□ 0.72
CBX1-201ENST00000225603 STAG3L1P0CL83 205 aa19.52■□□□□ 0.72
CBX1-201ENST00000225603 CDK7P50613 346 aa19.52■□□□□ 0.72
CBX1-201ENST00000225603 SV2AQ7L0J3 742 aa19.52■□□□□ 0.72
CBX1-201ENST00000225603 U2AF1L4Q8WU68 220 aaKnown RBP19.52■□□□□ 0.72
CBX1-201ENST00000225603 ARMC5Q96C12 935 aa19.52■□□□□ 0.72
CBX1-201ENST00000225603 FAM212AQ96EL1 285 aa19.52■□□□□ 0.72
CBX1-201ENST00000225603 FNBP1Q96RU3 617 aa19.52■□□□□ 0.72
CBX1-201ENST00000225603 CRISPLD2Q9H0B8 497 aa19.52■□□□□ 0.72
CBX1-201ENST00000225603 PIN4Q9Y237 131 aaKnown RBP19.52■□□□□ 0.72
CBX1-201ENST00000225603 LUC7L2Q9Y383 392 aaKnown RBP19.52■□□□□ 0.72
CBX1-201ENST00000225603 NPTXRO95502 500 aa19.52■□□□□ 0.71
CBX1-201ENST00000225603 CXCL8P10145 99 aa19.52■□□□□ 0.71
CBX1-201ENST00000225603 MXI1P50539 228 aa19.52■□□□□ 0.71
CBX1-201ENST00000225603 ENPEPQ07075 957 aa19.52■□□□□ 0.71
CBX1-201ENST00000225603 PCBP1Q15365 356 aaKnown RBP eCLIP19.52■□□□□ 0.71
CBX1-201ENST00000225603 EPC2Q52LR7 807 aa19.52■□□□□ 0.71
CBX1-201ENST00000225603 SCARA3Q6AZY7 606 aa19.52■□□□□ 0.71
CBX1-201ENST00000225603 GJB7Q6PEY0 223 aa19.52■□□□□ 0.71
CBX1-201ENST00000225603 RAD9BQ6WBX8 426 aa19.52■□□□□ 0.71
CBX1-201ENST00000225603 SEMA4DQ92854 862 aa19.52■□□□□ 0.71
CBX1-201ENST00000225603 INTS2Q9H0H0 1204 aaKnown RBP19.52■□□□□ 0.71
CBX1-201ENST00000225603 AGO3Q9H9G7 860 aaKnown RBP19.52■□□□□ 0.71
CBX1-201ENST00000225603 TMEM8AQ9HCN3 771 aa19.52■□□□□ 0.71
CBX1-201ENST00000225603 NLRC4Q9NPP4 1024 aa19.52■□□□□ 0.71
CBX1-201ENST00000225603 AJAP1Q9UKB5 411 aaPredicted RBP19.52■□□□□ 0.71
CBX1-201ENST00000225603 SGPL1O95470 568 aa19.51■□□□□ 0.71
CBX1-201ENST00000225603 CCDC175P0C221 793 aa19.51■□□□□ 0.71
CBX1-201ENST00000225603 TNNI1P19237 187 aa19.51■□□□□ 0.71
CBX1-201ENST00000225603 POLR2FP61218 127 aaKnown RBP19.51■□□□□ 0.71
CBX1-201ENST00000225603 ZNF618Q5T7W0 954 aa19.51■□□□□ 0.71
CBX1-201ENST00000225603 KLHDC7AQ5VTJ3 777 aa19.51■□□□□ 0.71
CBX1-201ENST00000225603 NOTUMQ6P988 496 aa19.51■□□□□ 0.71
CBX1-201ENST00000225603 OR5B17Q8NGF7 314 aa19.51■□□□□ 0.71
CBX1-201ENST00000225603 BAP1Q92560 729 aa19.51■□□□□ 0.71
CBX1-201ENST00000225603 ELMO3Q96BJ8 720 aa19.51■□□□□ 0.71
CBX1-201ENST00000225603 PLCB1Q9NQ66 1216 aa19.51■□□□□ 0.71
CBX1-201ENST00000225603 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.51■□□□□ 0.712e-8■■■■■ 67.3
CBX1-201ENST00000225603 ABHD10Q9NUJ1 306 aa19.51■□□□□ 0.71
CBX1-201ENST00000225603 C4BPAP04003 597 aaKnown RBP19.51■□□□□ 0.71
CBX1-201ENST00000225603 KRT39Q6A163 491 aa19.51■□□□□ 0.71
CBX1-201ENST00000225603 C15orf39Q6ZRI6 1047 aa19.51■□□□□ 0.71
CBX1-201ENST00000225603 USP37Q86T82 979 aa19.51■□□□□ 0.71
CBX1-201ENST00000225603 GPIHBP1Q8IV16 184 aa19.51■□□□□ 0.71
CBX1-201ENST00000225603 EHBP1Q8NDI1 1231 aa19.51■□□□□ 0.71
CBX1-201ENST00000225603 TAS1R2Q8TE23 839 aa19.51■□□□□ 0.71
CBX1-201ENST00000225603 CGRRF1Q99675 332 aa19.51■□□□□ 0.71
CBX1-201ENST00000225603 ADPGKQ9BRR6 497 aa19.51■□□□□ 0.71
CBX1-201ENST00000225603 ST3GAL5Q9UNP4 418 aa19.51■□□□□ 0.71
CBX1-201ENST00000225603 A0A1W2PQJ5 194 aa19.5■□□□□ 0.71
CBX1-201ENST00000225603 PMM2O15305 246 aa19.5■□□□□ 0.71
CBX1-201ENST00000225603 P4HA2O15460 535 aa19.5■□□□□ 0.71
CBX1-201ENST00000225603 N4BP1O75113 896 aaKnown RBP19.5■□□□□ 0.71
CBX1-201ENST00000225603 RPS6KA5O75582 802 aa19.5■□□□□ 0.71
CBX1-201ENST00000225603 TFRCP02786 760 aaKnown RBP19.5■□□□□ 0.71
CBX1-201ENST00000225603 GTF2H1P32780 548 aa19.5■□□□□ 0.71
CBX1-201ENST00000225603 UBXN11Q5T124 520 aa19.5■□□□□ 0.71
CBX1-201ENST00000225603 SLC27A1Q6PCB7 646 aa19.5■□□□□ 0.71
CBX1-201ENST00000225603 CCDC94Q9BW85 323 aaPredicted RBP19.5■□□□□ 0.71
CBX1-201ENST00000225603 RPF1Q9H9Y2 349 aaKnown RBP19.5■□□□□ 0.71
CBX1-201ENST00000225603 HES2Q9Y543 173 aa19.5■□□□□ 0.71
CBX1-201ENST00000225603 FHOD1Q9Y613 1164 aa19.5■□□□□ 0.71
CBX1-201ENST00000225603 ADGRG1Q9Y653 693 aa19.5■□□□□ 0.71
CBX1-201ENST00000225603 RPLP2P05387 115 aaKnown RBP19.49■□□□□ 0.71
CBX1-201ENST00000225603 CLTAP09496 248 aa19.49■□□□□ 0.71
CBX1-201ENST00000225603 UCHL3P15374 230 aa19.49■□□□□ 0.71
CBX1-201ENST00000225603 AXLP30530 894 aa19.49■□□□□ 0.71
CBX1-201ENST00000225603 ZBED6P86452 979 aa19.49■□□□□ 0.71
CBX1-201ENST00000225603 PKN2Q16513 984 aaKnown RBP19.49■□□□□ 0.71
CBX1-201ENST00000225603 SLC10A6Q3KNW5 377 aa19.49■□□□□ 0.71
CBX1-201ENST00000225603 TDRD10Q5VZ19 366 aaKnown RBP19.49■□□□□ 0.71
CBX1-201ENST00000225603 TRAF7Q6Q0C0 670 aa19.49■□□□□ 0.71
CBX1-201ENST00000225603 FAM126BQ8IXS8 530 aa19.49■□□□□ 0.71
CBX1-201ENST00000225603 DNAJC7Q99615 494 aa19.49■□□□□ 0.71
CBX1-201ENST00000225603 CXCL16Q9H2A7 254 aa19.49■□□□□ 0.71
CBX1-201ENST00000225603 CEP72Q9P209 647 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms