RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 KCNMB3Q9NPA1 279 aa15.29■□□□□ 0.04
SFXN3-201ENST00000224807 TXLNGQ9NUQ3 528 aa15.29■□□□□ 0.04
SFXN3-201ENST00000224807 ARMCX1Q9P291 453 aa15.29■□□□□ 0.04
SFXN3-201ENST00000224807 ZNF219Q9P2Y4 722 aaPredicted RBP15.29■□□□□ 0.04
SFXN3-201ENST00000224807 USP20Q9Y2K6 914 aa15.29■□□□□ 0.04
SFXN3-201ENST00000224807 MAST2Q6P0Q8 1798 aa15.29■□□□□ 0.04
SFXN3-201ENST00000224807 PEX11AO75192 247 aa15.29■□□□□ 0.04
SFXN3-201ENST00000224807 CALB2P22676 271 aa15.29■□□□□ 0.04
SFXN3-201ENST00000224807 RRM1P23921 792 aa15.29■□□□□ 0.04
SFXN3-201ENST00000224807 SERPINB4P48594 390 aa15.29■□□□□ 0.04
SFXN3-201ENST00000224807 RWDD2BP57060 319 aa15.29■□□□□ 0.04
SFXN3-201ENST00000224807 STRN3Q13033 797 aa15.29■□□□□ 0.04
SFXN3-201ENST00000224807 ORC2Q13416 577 aaPredicted RBP15.29■□□□□ 0.04
SFXN3-201ENST00000224807 PPP4R3CPQ6ZMV5 832 aa15.29■□□□□ 0.04
SFXN3-201ENST00000224807 SLC25A41Q8N5S1 370 aa15.29■□□□□ 0.04
SFXN3-201ENST00000224807 JDP2Q8WYK2 163 aa15.29■□□□□ 0.04
SFXN3-201ENST00000224807 CBWD1Q9BRT8 395 aa15.29■□□□□ 0.04
SFXN3-201ENST00000224807 ZFP69BQ9UJL9 534 aa15.29■□□□□ 0.04
SFXN3-201ENST00000224807 CORO1CQ9ULV4 474 aaPredicted RBP15.29■□□□□ 0.04
SFXN3-201ENST00000224807 TRAF3IP3Q9Y228 551 aa15.29■□□□□ 0.04
SFXN3-201ENST00000224807 SORBS3O60504 671 aa15.28■□□□□ 0.04
SFXN3-201ENST00000224807 LUC7L3O95232 432 aaKnown RBP15.28■□□□□ 0.04
SFXN3-201ENST00000224807 KRT10P13645 584 aa15.28■□□□□ 0.04
SFXN3-201ENST00000224807 RPA3P35244 121 aaPredicted RBP15.28■□□□□ 0.04
SFXN3-201ENST00000224807 KLC1Q07866 573 aa15.28■□□□□ 0.04
SFXN3-201ENST00000224807 RASIP1Q5U651 963 aa15.28■□□□□ 0.04
SFXN3-201ENST00000224807 RINT1Q6NUQ1 792 aa15.28■□□□□ 0.04
SFXN3-201ENST00000224807 SEC14L1Q92503 715 aa15.28■□□□□ 0.04
SFXN3-201ENST00000224807 TOPORSQ9NS56 1045 aaPredicted RBP15.28■□□□□ 0.04
SFXN3-201ENST00000224807 XIRP1Q702N8 1843 aaKnown RBP15.28■□□□□ 0.04
SFXN3-201ENST00000224807 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.28■□□□□ 0.04
SFXN3-201ENST00000224807 A0A1W2PPM1 405 aa15.28■□□□□ 0.04
SFXN3-201ENST00000224807 BTNL10A8MVZ5 291 aa15.28■□□□□ 0.04
SFXN3-201ENST00000224807 TTC4O95801 387 aa15.28■□□□□ 0.04
SFXN3-201ENST00000224807 TTLL1O95922 423 aa15.28■□□□□ 0.04
SFXN3-201ENST00000224807 BCRP11274 1271 aa15.28■□□□□ 0.04
SFXN3-201ENST00000224807 PLS3P13797 630 aa15.28■□□□□ 0.04
SFXN3-201ENST00000224807 CNGA1P29973 690 aa15.28■□□□□ 0.04
SFXN3-201ENST00000224807 DYNLT1P63172 113 aa15.28■□□□□ 0.04
SFXN3-201ENST00000224807 SEPT2Q15019 361 aa15.28■□□□□ 0.04
SFXN3-201ENST00000224807 ASPRV1Q53RT3 343 aa15.28■□□□□ 0.04
SFXN3-201ENST00000224807 IZUMO3Q5VZ72 239 aa15.28■□□□□ 0.04
SFXN3-201ENST00000224807 ZNF804AQ7Z570 1209 aa15.28■□□□□ 0.04
SFXN3-201ENST00000224807 NOP9Q86U38 636 aaKnown RBP15.28■□□□□ 0.04
SFXN3-201ENST00000224807 TTC1Q99614 292 aa15.28■□□□□ 0.04
SFXN3-201ENST00000224807 FBXO6Q9NRD1 293 aaPredicted RBP15.28■□□□□ 0.04
SFXN3-201ENST00000224807 DOT1LQ8TEK3 1739 aa15.28■□□□□ 0.04
SFXN3-201ENST00000224807 PITPNM2Q9BZ72 1349 aa15.28■□□□□ 0.04
SFXN3-201ENST00000224807 G3V3G9 751 aa15.28■□□□□ 0.04
SFXN3-201ENST00000224807 CAPN9O14815 690 aa15.28■□□□□ 0.04
SFXN3-201ENST00000224807 TPBGLP0DKB5 382 aa15.28■□□□□ 0.04
SFXN3-201ENST00000224807 ALDH3A1P30838 453 aa15.28■□□□□ 0.04
SFXN3-201ENST00000224807 MAPK4P31152 587 aa15.28■□□□□ 0.04
SFXN3-201ENST00000224807 USP4Q13107 963 aa15.28■□□□□ 0.04
SFXN3-201ENST00000224807 DCAF8Q5TAQ9 597 aa15.28■□□□□ 0.04
SFXN3-201ENST00000224807 CCDC174Q6PII3 467 aa15.28■□□□□ 0.04
SFXN3-201ENST00000224807 PHC3Q8NDX5 983 aa15.28■□□□□ 0.04
SFXN3-201ENST00000224807 STK32AQ8WU08 396 aa15.28■□□□□ 0.04
SFXN3-201ENST00000224807 PRR11Q96HE9 360 aaPredicted RBP15.28■□□□□ 0.04
SFXN3-201ENST00000224807 RBM15Q96T37 977 aaKnown RBP eCLIP15.28■□□□□ 0.04
SFXN3-201ENST00000224807 DDX4Q9NQI0 724 aaKnown RBP15.28■□□□□ 0.04
SFXN3-201ENST00000224807 RALAP11233 206 aa15.27■□□□□ 0.04
SFXN3-201ENST00000224807 PEX5P50542 639 aa15.27■□□□□ 0.04
SFXN3-201ENST00000224807 PPP3CAQ08209 521 aa15.27■□□□□ 0.04
SFXN3-201ENST00000224807 KPNB1Q14974 876 aaKnown RBP15.27■□□□□ 0.04
SFXN3-201ENST00000224807 DOK7Q18PE1 504 aa15.27■□□□□ 0.04
SFXN3-201ENST00000224807 GALNTL6Q49A17 601 aa15.27■□□□□ 0.04
SFXN3-201ENST00000224807 TPTE2Q6XPS3 522 aa15.27■□□□□ 0.04
SFXN3-201ENST00000224807 SYT2Q8N9I0 419 aaPredicted RBP15.27■□□□□ 0.04
SFXN3-201ENST00000224807 CCDC77Q9BR77 488 aa15.27■□□□□ 0.04
SFXN3-201ENST00000224807 KIFC3Q9BVG8 833 aa15.27■□□□□ 0.04
SFXN3-201ENST00000224807 TMEM117Q9H0C3 514 aa15.27■□□□□ 0.04
SFXN3-201ENST00000224807 TRABDQ9H4I3 376 aa15.27■□□□□ 0.04
SFXN3-201ENST00000224807 PARVGQ9HBI0 331 aa15.27■□□□□ 0.04
SFXN3-201ENST00000224807 A0A0A6YYK5 440 aaPredicted RBP15.27■□□□□ 0.03
SFXN3-201ENST00000224807 ESYT2A0FGR8 921 aa15.27■□□□□ 0.03
SFXN3-201ENST00000224807 MAPK13O15264 365 aa15.27■□□□□ 0.03
SFXN3-201ENST00000224807 MSH4O15457 936 aa15.27■□□□□ 0.03
SFXN3-201ENST00000224807 PYGLP06737 847 aa15.27■□□□□ 0.03
SFXN3-201ENST00000224807 KITP10721 976 aa15.27■□□□□ 0.03
SFXN3-201ENST00000224807 KCNA3P22001 575 aa15.27■□□□□ 0.03
SFXN3-201ENST00000224807 NT5C2P49902 561 aa15.27■□□□□ 0.03
SFXN3-201ENST00000224807 MARSP56192 900 aaKnown RBP15.27■□□□□ 0.03
SFXN3-201ENST00000224807 CDR2Q01850 454 aa15.27■□□□□ 0.03
SFXN3-201ENST00000224807 P3H1Q32P28 736 aa15.27■□□□□ 0.03
SFXN3-201ENST00000224807 CERKLQ49MI3 558 aaPredicted RBP15.27■□□□□ 0.03
SFXN3-201ENST00000224807 ATP13A4Q4VNC1 1196 aa15.27■□□□□ 0.03
SFXN3-201ENST00000224807 RHOT2Q8IXI1 618 aa15.27■□□□□ 0.03
SFXN3-201ENST00000224807 GLIS1Q8NBF1 620 aa15.27■□□□□ 0.03
SFXN3-201ENST00000224807 LINC00116Q8NCU8 138 aa15.27■□□□□ 0.03
SFXN3-201ENST00000224807 ART4Q93070 314 aa15.27■□□□□ 0.03
SFXN3-201ENST00000224807 AGPAT3Q9NRZ7 376 aa15.27■□□□□ 0.03
SFXN3-201ENST00000224807 NMRK1Q9NWW6 199 aa15.27■□□□□ 0.03
SFXN3-201ENST00000224807 ETAA1Q9NY74 926 aa15.27■□□□□ 0.03
SFXN3-201ENST00000224807 MARCOQ9UEW3 520 aaPredicted RBP15.27■□□□□ 0.03
SFXN3-201ENST00000224807 ZNF148Q9UQR1 794 aa15.27■□□□□ 0.03
SFXN3-201ENST00000224807 ZBTB12Q9Y330 459 aaPredicted RBP15.27■□□□□ 0.03
SFXN3-201ENST00000224807 PCDHAC2Q9Y5I4 1007 aa15.27■□□□□ 0.03
SFXN3-201ENST00000224807 SNED1Q8TER0 1413 aa15.27■□□□□ 0.03
SFXN3-201ENST00000224807 NVLO15381 856 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms