RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 TRIM59Q8IWR1 403 aa19.54■□□□□ 0.72
CLIP2-201ENST00000223398 SH3TC2Q8TF17 1288 aa19.54■□□□□ 0.72
CLIP2-201ENST00000223398 TRIM62Q9BVG3 475 aa19.54■□□□□ 0.72
CLIP2-201ENST00000223398 SLC38A7Q9NVC3 462 aa19.54■□□□□ 0.72
CLIP2-201ENST00000223398 PRMT7Q9NVM4 692 aaPredicted RBP19.54■□□□□ 0.72
CLIP2-201ENST00000223398 FMO5P49326 533 aa19.54■□□□□ 0.72
CLIP2-201ENST00000223398 CLNS1AP54105 237 aaKnown RBP19.54■□□□□ 0.72
CLIP2-201ENST00000223398 ST8SIA6P61647 398 aa19.54■□□□□ 0.72
CLIP2-201ENST00000223398 CUL1Q13616 776 aa19.54■□□□□ 0.72
CLIP2-201ENST00000223398 NOTUMQ6P988 496 aa19.54■□□□□ 0.72
CLIP2-201ENST00000223398 AGAP3Q96P47 875 aa19.54■□□□□ 0.72
CLIP2-201ENST00000223398 VCX3AQ9NNX9 186 aa19.54■□□□□ 0.72
CLIP2-201ENST00000223398 DDX56Q9NY93 547 aaKnown RBP19.54■□□□□ 0.72
CLIP2-201ENST00000223398 GTSE1Q9NYZ3 720 aa19.54■□□□□ 0.72
CLIP2-201ENST00000223398 ZDHHC9Q9Y397 364 aa19.54■□□□□ 0.72
CLIP2-201ENST00000223398 MMS22LQ6ZRQ5 1243 aa19.53■□□□□ 0.72
CLIP2-201ENST00000223398 RASSF3Q86WH2 238 aa19.53■□□□□ 0.72
CLIP2-201ENST00000223398 CATSPER3Q86XQ3 398 aa19.53■□□□□ 0.72
CLIP2-201ENST00000223398 CCNYL1Q8N7R7 359 aa19.53■□□□□ 0.72
CLIP2-201ENST00000223398 UBA3Q8TBC4 463 aa19.53■□□□□ 0.72
CLIP2-201ENST00000223398 BPIFA3Q9BQP9 254 aa19.53■□□□□ 0.72
CLIP2-201ENST00000223398 IL25Q9H293 177 aa19.53■□□□□ 0.72
CLIP2-201ENST00000223398 NCOA3Q9Y6Q9 1424 aa19.53■□□□□ 0.72
CLIP2-201ENST00000223398 ESYT3A0FGR9 886 aa19.53■□□□□ 0.72
CLIP2-201ENST00000223398 CCDC78A2IDD5 438 aa19.53■□□□□ 0.72
CLIP2-201ENST00000223398 ADM5C9JUS6 153 aa19.53■□□□□ 0.72
CLIP2-201ENST00000223398 SLC16A3O15427 465 aaKnown RBP19.53■□□□□ 0.72
CLIP2-201ENST00000223398 MSH4O15457 936 aa19.53■□□□□ 0.72
CLIP2-201ENST00000223398 TAL1P17542 331 aaPredicted RBP19.53■□□□□ 0.72
CLIP2-201ENST00000223398 YY1P25490 414 aa19.53■□□□□ 0.72
CLIP2-201ENST00000223398 TMPRSS15P98073 1019 aa19.53■□□□□ 0.72
CLIP2-201ENST00000223398 THEMIS2Q5TEJ8 643 aa19.53■□□□□ 0.72
CLIP2-201ENST00000223398 TTC23LQ6PF05 361 aa19.53■□□□□ 0.72
CLIP2-201ENST00000223398 MIPOL1Q8TD10 442 aa19.53■□□□□ 0.72
CLIP2-201ENST00000223398 DPF3Q92784 378 aa19.53■□□□□ 0.72
CLIP2-201ENST00000223398 BHMTQ93088 406 aa19.53■□□□□ 0.72
CLIP2-201ENST00000223398 ULK4Q96C45 1275 aa19.53■□□□□ 0.72
CLIP2-201ENST00000223398 DDX50Q9BQ39 737 aaKnown RBP19.53■□□□□ 0.72
CLIP2-201ENST00000223398 APEX2Q9UBZ4 518 aa19.53■□□□□ 0.72
CLIP2-201ENST00000223398 PLAAQ9Y263 795 aa19.53■□□□□ 0.72
CLIP2-201ENST00000223398 KRT14P02533 472 aa19.53■□□□□ 0.72
CLIP2-201ENST00000223398 VCAM1P19320 739 aa19.53■□□□□ 0.72
CLIP2-201ENST00000223398 GSPT2Q8IYD1 628 aaKnown RBP19.53■□□□□ 0.72
CLIP2-201ENST00000223398 C7orf25Q9BPX7 421 aa19.53■□□□□ 0.72
CLIP2-201ENST00000223398 NRXN1Q9ULB1 1477 aa19.53■□□□□ 0.72
CLIP2-201ENST00000223398 CLCN3P51790 818 aa19.53■□□□□ 0.72
CLIP2-201ENST00000223398 FAM133BQ5BKY9 247 aaKnown RBP19.53■□□□□ 0.72
CLIP2-201ENST00000223398 TADA2BQ86TJ2 420 aa19.53■□□□□ 0.72
CLIP2-201ENST00000223398 HVCN1Q96D96 273 aa19.53■□□□□ 0.72
CLIP2-201ENST00000223398 L3MBTL3Q96JM7 780 aaPredicted RBP19.53■□□□□ 0.72
CLIP2-201ENST00000223398 AGLP35573 1532 aa19.52■□□□□ 0.72
CLIP2-201ENST00000223398 ART3Q13508 389 aa19.52■□□□□ 0.72
CLIP2-201ENST00000223398 RTFDC1Q9BY42 306 aaPredicted RBP19.52■□□□□ 0.72
CLIP2-201ENST00000223398 BFARQ9NZS9 450 aa19.52■□□□□ 0.72
CLIP2-201ENST00000223398 SLC13A4Q9UKG4 626 aa19.52■□□□□ 0.72
CLIP2-201ENST00000223398 CCDC195A0A1B0GUA6 201 aa19.52■□□□□ 0.72
CLIP2-201ENST00000223398 SLC37A4O43826 429 aa19.52■□□□□ 0.72
CLIP2-201ENST00000223398 HLA-DRAP01903 254 aa19.52■□□□□ 0.72
CLIP2-201ENST00000223398 ALDH7A1P49419 539 aaKnown RBP19.52■□□□□ 0.72
CLIP2-201ENST00000223398 PDIA2Q13087 525 aaKnown RBP19.52■□□□□ 0.72
CLIP2-201ENST00000223398 GPRASP2Q96D09 838 aa19.52■□□□□ 0.72
CLIP2-201ENST00000223398 HAUS8Q9BT25 410 aa19.52■□□□□ 0.72
CLIP2-201ENST00000223398 FRMPD1Q5SYB0 1578 aa19.52■□□□□ 0.72
CLIP2-201ENST00000223398 SV2CQ496J9 727 aa19.52■□□□□ 0.72
CLIP2-201ENST00000223398 PABPC5Q96DU9 382 aaKnown RBP19.52■□□□□ 0.72
CLIP2-201ENST00000223398 KRT38O76015 456 aa19.52■□□□□ 0.71
CLIP2-201ENST00000223398 ZBED8Q8IZ13 594 aa19.52■□□□□ 0.71
CLIP2-201ENST00000223398 TTC8Q8TAM2 541 aa19.52■□□□□ 0.71
CLIP2-201ENST00000223398 MUC3BQ9H195 1237 aa19.52■□□□□ 0.71
CLIP2-201ENST00000223398 OPHN1O60890 802 aa19.51■□□□□ 0.71
CLIP2-201ENST00000223398 IL31Q6EBC2 164 aa19.51■□□□□ 0.71
CLIP2-201ENST00000223398 ATP11BQ9Y2G3 1177 aa19.51■□□□□ 0.71
CLIP2-201ENST00000223398 SH3BP1Q9Y3L3 701 aa19.51■□□□□ 0.71
CLIP2-201ENST00000223398 DCDC2CA8MYV0 355 aa19.51■□□□□ 0.71
CLIP2-201ENST00000223398 DPYDQ12882 1025 aa19.51■□□□□ 0.71
CLIP2-201ENST00000223398 CCDC144BQ3MJ40 725 aa19.51■□□□□ 0.71
CLIP2-201ENST00000223398 RFFLQ8WZ73 363 aa19.51■□□□□ 0.71
CLIP2-201ENST00000223398 MCEEQ96PE7 176 aa19.51■□□□□ 0.71
CLIP2-201ENST00000223398 GPRC5CQ9NQ84 441 aa19.51■□□□□ 0.71
CLIP2-201ENST00000223398 ABI2Q9NYB9 513 aaPredicted RBP19.51■□□□□ 0.71
CLIP2-201ENST00000223398 PXDNLA1KZ92 1463 aa19.51■□□□□ 0.71
CLIP2-201ENST00000223398 INO80Q9ULG1 1556 aaPredicted RBP19.51■□□□□ 0.71
CLIP2-201ENST00000223398 FMR1Q06787 632 aaKnown RBP eCLIP19.51■□□□□ 0.71
CLIP2-201ENST00000223398 KIZQ2M2Z5 673 aa19.51■□□□□ 0.71
CLIP2-201ENST00000223398 OSBPL9Q96SU4 736 aa19.51■□□□□ 0.71
CLIP2-201ENST00000223398 IGSF9BQ9UPX0 1349 aa19.51■□□□□ 0.71
CLIP2-201ENST00000223398 RTN2O75298 545 aa19.51■□□□□ 0.71
CLIP2-201ENST00000223398 KITP10721 976 aa19.51■□□□□ 0.71
CLIP2-201ENST00000223398 RPA1P27694 616 aa19.51■□□□□ 0.71
CLIP2-201ENST00000223398 KRT17Q04695 432 aa19.51■□□□□ 0.71
CLIP2-201ENST00000223398 EPC2Q52LR7 807 aa19.51■□□□□ 0.71
CLIP2-201ENST00000223398 C6orf118Q5T5N4 469 aa19.51■□□□□ 0.71
CLIP2-201ENST00000223398 DCP1BQ8IZD4 617 aaKnown RBP19.51■□□□□ 0.71
CLIP2-201ENST00000223398 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.51■□□□□ 0.71
CLIP2-201ENST00000223398 RASA4BC9J798 803 aa19.51■□□□□ 0.71
CLIP2-201ENST00000223398 RASA4O43374 803 aa19.51■□□□□ 0.71
CLIP2-201ENST00000223398 VTNP04004 478 aa19.51■□□□□ 0.71
CLIP2-201ENST00000223398 SMARCA1P28370 1054 aa19.51■□□□□ 0.71
CLIP2-201ENST00000223398 ATG16L1Q676U5 607 aa19.51■□□□□ 0.71
CLIP2-201ENST00000223398 DPF2Q92785 391 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms