RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 GRIK3Q13003 919 aa17.04■□□□□ 0.32
SF3A2-201ENST00000221494 SPP2Q13103 211 aa17.04■□□□□ 0.32
SF3A2-201ENST00000221494 DGKZQ13574 1117 aa17.04■□□□□ 0.32
SF3A2-201ENST00000221494 CEP128Q6ZU80 1094 aa17.04■□□□□ 0.32
SF3A2-201ENST00000221494 BZW1Q7L1Q6 419 aaKnown RBP17.04■□□□□ 0.32
SF3A2-201ENST00000221494 TEX9Q8N6V9 391 aa17.04■□□□□ 0.32
SF3A2-201ENST00000221494 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.04■□□□□ 0.329e-8■□□□□ 8.4
SF3A2-201ENST00000221494 CD101Q93033 1021 aa17.04■□□□□ 0.32
SF3A2-201ENST00000221494 TUFT1Q9NNX1 390 aa17.04■□□□□ 0.32
SF3A2-201ENST00000221494 PICK1Q9NRD5 415 aa17.04■□□□□ 0.32
SF3A2-201ENST00000221494 LGALS13Q9UHV8 139 aa17.04■□□□□ 0.32
SF3A2-201ENST00000221494 CORO1CQ9ULV4 474 aaPredicted RBP17.04■□□□□ 0.32
SF3A2-201ENST00000221494 COG5Q9UP83 839 aa17.04■□□□□ 0.32
SF3A2-201ENST00000221494 USP20Q9Y2K6 914 aa17.04■□□□□ 0.32
SF3A2-201ENST00000221494 FRMD4BQ9Y2L6 1034 aa17.04■□□□□ 0.32
SF3A2-201ENST00000221494 RABGAP1Q9Y3P9 1069 aa17.04■□□□□ 0.32
SF3A2-201ENST00000221494 PCDHB13Q9Y5F0 798 aa17.04■□□□□ 0.32
SF3A2-201ENST00000221494 ZNF536O15090 1300 aa17.03■□□□□ 0.32
SF3A2-201ENST00000221494 USP17L15C9J2P7 530 aa17.03■□□□□ 0.32
SF3A2-201ENST00000221494 USP17L13C9JLJ4 530 aa17.03■□□□□ 0.32
SF3A2-201ENST00000221494 USP17L11C9JVI0 530 aa17.03■□□□□ 0.32
SF3A2-201ENST00000221494 USP17L18D6R9N7 530 aa17.03■□□□□ 0.32
SF3A2-201ENST00000221494 USP17L22D6RA61 530 aa17.03■□□□□ 0.32
SF3A2-201ENST00000221494 USP17L17D6RBQ6 530 aa17.03■□□□□ 0.32
SF3A2-201ENST00000221494 USP17L19D6RCP7 530 aa17.03■□□□□ 0.32
SF3A2-201ENST00000221494 USP17L20D6RJB6 530 aa17.03■□□□□ 0.32
SF3A2-201ENST00000221494 IGF2BP3O00425 579 aaKnown RBP eCLIP17.03■□□□□ 0.32
SF3A2-201ENST00000221494 WDR46O15213 610 aaKnown RBP17.03■□□□□ 0.32
SF3A2-201ENST00000221494 GZMAP12544 262 aa17.03■□□□□ 0.32
SF3A2-201ENST00000221494 ITIH2P19823 946 aa17.03■□□□□ 0.32
SF3A2-201ENST00000221494 ABCB4P21439 1286 aa17.03■□□□□ 0.32
SF3A2-201ENST00000221494 SREBF1P36956 1147 aa17.03■□□□□ 0.32
SF3A2-201ENST00000221494 USP17L24Q0WX57 530 aa17.03■□□□□ 0.32
SF3A2-201ENST00000221494 MTMR2Q13614 643 aa17.03■□□□□ 0.32
SF3A2-201ENST00000221494 PARP6Q2NL67 630 aa17.03■□□□□ 0.32
SF3A2-201ENST00000221494 USH1GQ495M9 461 aa17.03■□□□□ 0.32
SF3A2-201ENST00000221494 SPDYAQ5MJ70 313 aa17.03■□□□□ 0.32
SF3A2-201ENST00000221494 USP17L6PQ6QN14 398 aa17.03■□□□□ 0.32
SF3A2-201ENST00000221494 DNAAF5Q86Y56 855 aa17.03■□□□□ 0.32
SF3A2-201ENST00000221494 SLC13A5Q86YT5 568 aaPredicted RBP17.03■□□□□ 0.32
SF3A2-201ENST00000221494 ZC3H15Q8WU90 426 aaKnown RBP17.03■□□□□ 0.32
SF3A2-201ENST00000221494 SLC5A4Q9NY91 659 aa17.03■□□□□ 0.32
SF3A2-201ENST00000221494 CTNNAL1Q9UBT7 734 aa17.03■□□□□ 0.32
SF3A2-201ENST00000221494 RPL26L1Q9UNX3 145 aaKnown RBP17.03■□□□□ 0.32
SF3A2-201ENST00000221494 MEIS2O14770 477 aa17.02■□□□□ 0.32
SF3A2-201ENST00000221494 NEBLO76041 1014 aa17.02■□□□□ 0.32
SF3A2-201ENST00000221494 ECEL1O95672 775 aa17.02■□□□□ 0.32
SF3A2-201ENST00000221494 RPSAP08865 295 aaKnown RBP17.02■□□□□ 0.32
SF3A2-201ENST00000221494 TAL1P17542 331 aaPredicted RBP17.02■□□□□ 0.32
SF3A2-201ENST00000221494 STAT3P40763 770 aa17.02■□□□□ 0.32
SF3A2-201ENST00000221494 MSH2P43246 934 aa17.02■□□□□ 0.32
SF3A2-201ENST00000221494 BACE1P56817 501 aa17.02■□□□□ 0.32
SF3A2-201ENST00000221494 NOL9Q5SY16 702 aaKnown RBP17.02■□□□□ 0.32
SF3A2-201ENST00000221494 LRCH2Q5VUJ6 765 aa17.02■□□□□ 0.32
SF3A2-201ENST00000221494 TTC27Q6P3X3 843 aa17.02■□□□□ 0.32
SF3A2-201ENST00000221494 PPP1R21Q6ZMI0 780 aa17.02■□□□□ 0.32
SF3A2-201ENST00000221494 ARHGEF18Q6ZSZ5 1173 aa17.02■□□□□ 0.32
SF3A2-201ENST00000221494 ZNF280CQ8ND82 737 aa17.02■□□□□ 0.32
SF3A2-201ENST00000221494 SH3TC2Q8TF17 1288 aa17.02■□□□□ 0.32
SF3A2-201ENST00000221494 ARHGEF2Q92974 986 aaKnown RBP17.02■□□□□ 0.32
SF3A2-201ENST00000221494 MAGEB18Q96M61 343 aa17.02■□□□□ 0.32
SF3A2-201ENST00000221494 TXLNGQ9NUQ3 528 aa17.02■□□□□ 0.32
SF3A2-201ENST00000221494 ZHX2Q9Y6X8 837 aa17.02■□□□□ 0.32
SF3A2-201ENST00000221494 ADGRA3Q8IWK6 1321 aa17.02■□□□□ 0.32
SF3A2-201ENST00000221494 TMEM120BA0PK00 339 aa17.02■□□□□ 0.31
SF3A2-201ENST00000221494 FAM13AO94988 1023 aa17.02■□□□□ 0.31
SF3A2-201ENST00000221494 PAX7P23759 505 aa17.02■□□□□ 0.31
SF3A2-201ENST00000221494 KCNJ2P63252 427 aa17.02■□□□□ 0.31
SF3A2-201ENST00000221494 ZNF211Q13398 564 aaPredicted RBP17.02■□□□□ 0.31
SF3A2-201ENST00000221494 PRKG1Q13976 671 aa17.02■□□□□ 0.31
SF3A2-201ENST00000221494 RIBC1Q8N443 379 aaPredicted RBP17.02■□□□□ 0.31
SF3A2-201ENST00000221494 FBF1Q8TES7 1133 aa17.02■□□□□ 0.31
SF3A2-201ENST00000221494 GJA10Q969M2 543 aa17.02■□□□□ 0.31
SF3A2-201ENST00000221494 LENG9Q96B70 501 aa17.02■□□□□ 0.31
SF3A2-201ENST00000221494 AS3MTQ9HBK9 375 aa17.02■□□□□ 0.31
SF3A2-201ENST00000221494 CTTNBP2NLQ9P2B4 639 aa17.02■□□□□ 0.31
SF3A2-201ENST00000221494 VAV3Q9UKW4 847 aa17.02■□□□□ 0.31
SF3A2-201ENST00000221494 TCP11X1B4DZS4 312 aa17.01■□□□□ 0.31
SF3A2-201ENST00000221494 PMM2O15305 246 aa17.01■□□□□ 0.31
SF3A2-201ENST00000221494 CYP3A4P08684 503 aa17.01■□□□□ 0.31
SF3A2-201ENST00000221494 ATP2A2P16615 1042 aaKnown RBP17.01■□□□□ 0.31
SF3A2-201ENST00000221494 FGFR4P22455 802 aa17.01■□□□□ 0.31
SF3A2-201ENST00000221494 SSR1P43307 286 aaKnown RBP17.01■□□□□ 0.31
SF3A2-201ENST00000221494 PSMC6P62333 389 aa17.01■□□□□ 0.31
SF3A2-201ENST00000221494 CETN1Q12798 172 aa17.01■□□□□ 0.31
SF3A2-201ENST00000221494 RHBDF2Q6PJF5 856 aa17.01■□□□□ 0.31
SF3A2-201ENST00000221494 VSTM1Q6UX27 236 aa17.01■□□□□ 0.31
SF3A2-201ENST00000221494 RELL1Q8IUW5 271 aa17.01■□□□□ 0.31
SF3A2-201ENST00000221494 ARMC2Q8NEN0 867 aa17.01■□□□□ 0.31
SF3A2-201ENST00000221494 P2RX7Q99572 595 aaKnown RBP17.01■□□□□ 0.31
SF3A2-201ENST00000221494 FGFR1OP2Q9NVK5 253 aa17.01■□□□□ 0.31
SF3A2-201ENST00000221494 KLHL14Q9P2G3 628 aa17.01■□□□□ 0.31
SF3A2-201ENST00000221494 RBBP6Q7Z6E9 1792 aaKnown RBP17■□□□□ 0.31
SF3A2-201ENST00000221494 CLIC2O15247 247 aa17■□□□□ 0.31
SF3A2-201ENST00000221494 IFNAR2P48551 515 aa17■□□□□ 0.31
SF3A2-201ENST00000221494 STRN3Q13033 797 aa17■□□□□ 0.31
SF3A2-201ENST00000221494 TRAF1Q13077 416 aa17■□□□□ 0.31
SF3A2-201ENST00000221494 BLMHQ13867 455 aa17■□□□□ 0.31
SF3A2-201ENST00000221494 SIX1Q15475 284 aaPredicted RBP17■□□□□ 0.31
SF3A2-201ENST00000221494 RINT1Q6NUQ1 792 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms