RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 ZBTB41Q5SVQ8 909 aa31.95■■■□□ 2.71
PABPN1-201ENST00000216727 USP38Q8NB14 1042 aa31.95■■■□□ 2.71
PABPN1-201ENST00000216727 RNF149Q8NC42 400 aa31.95■■■□□ 2.71
PABPN1-201ENST00000216727 PI4K2AQ9BTU6 479 aa31.95■■■□□ 2.71
PABPN1-201ENST00000216727 ERAP1Q9NZ08 941 aa31.95■■■□□ 2.71
PABPN1-201ENST00000216727 AMFRQ9UKV5 643 aa31.95■■■□□ 2.71
PABPN1-201ENST00000216727 PLXNB2O15031 1838 aa31.95■■■□□ 2.71
PABPN1-201ENST00000216727 PLXNA1Q9UIW2 1896 aa31.95■■■□□ 2.71
PABPN1-201ENST00000216727 PTPRJQ12913 1337 aa31.95■■■□□ 2.7
PABPN1-201ENST00000216727 RBM47A0AV96 593 aaKnown RBP31.95■■■□□ 2.7
PABPN1-201ENST00000216727 GPC5P78333 572 aa31.95■■■□□ 2.7
PABPN1-201ENST00000216727 LMBRD2Q68DH5 695 aaPredicted RBP31.95■■■□□ 2.7
PABPN1-201ENST00000216727 CCNI2Q6ZMN8 369 aaPredicted RBP31.95■■■□□ 2.7
PABPN1-201ENST00000216727 LRRC71Q8N4P6 559 aa31.95■■■□□ 2.7
PABPN1-201ENST00000216727 SRGAP2CP0DJJ0 459 aa31.94■■■□□ 2.7
PABPN1-201ENST00000216727 MAPK6Q16659 721 aa31.94■■■□□ 2.7
PABPN1-201ENST00000216727 DDX1Q92499 740 aaKnown RBP31.94■■■□□ 2.7
PABPN1-201ENST00000216727 ACO2Q99798 780 aaKnown RBP31.94■■■□□ 2.7
PABPN1-201ENST00000216727 GBA2Q9HCG7 927 aaPredicted RBP31.94■■■□□ 2.7
PABPN1-201ENST00000216727 TMEM59LQ9UK28 342 aa31.94■■■□□ 2.7
PABPN1-201ENST00000216727 FAM189A1O60320 539 aa31.93■■■□□ 2.7
PABPN1-201ENST00000216727 GRM1Q13255 1194 aa31.93■■■□□ 2.7
PABPN1-201ENST00000216727 TAF3Q5VWG9 929 aa31.93■■■□□ 2.7
PABPN1-201ENST00000216727 METTL13Q8N6R0 699 aa31.93■■■□□ 2.7
PABPN1-201ENST00000216727 ACP6Q9NPH0 428 aa31.93■■■□□ 2.7
PABPN1-201ENST00000216727 COG5Q9UP83 839 aa31.93■■■□□ 2.7
PABPN1-201ENST00000216727 VNN1O95497 513 aa31.93■■■□□ 2.7
PABPN1-201ENST00000216727 PRKCBP05771 671 aa31.93■■■□□ 2.7
PABPN1-201ENST00000216727 MMEP08473 750 aa31.93■■■□□ 2.7
PABPN1-201ENST00000216727 PIK3CAP42336 1068 aa31.93■■■□□ 2.7
PABPN1-201ENST00000216727 BIRC3Q13489 604 aa31.93■■■□□ 2.7
PABPN1-201ENST00000216727 BRSK2Q8IWQ3 736 aa31.93■■■□□ 2.7
PABPN1-201ENST00000216727 DHX38Q92620 1227 aaKnown RBP31.93■■■□□ 2.7
PABPN1-201ENST00000216727 IVNS1ABPQ9Y6Y0 642 aa31.93■■■□□ 2.7
PABPN1-201ENST00000216727 TTLL13PA6NNM8 815 aa31.92■■■□□ 2.7
PABPN1-201ENST00000216727 AP3M2P53677 418 aa31.92■■■□□ 2.7
PABPN1-201ENST00000216727 TFDP1Q14186 410 aa31.92■■■□□ 2.7
PABPN1-201ENST00000216727 C8orf74Q6P047 294 aa31.92■■■□□ 2.7
PABPN1-201ENST00000216727 EMID1Q96A84 441 aaPredicted RBP31.92■■■□□ 2.7
PABPN1-201ENST00000216727 FAM84AQ96KN4 292 aa31.92■■■□□ 2.7
PABPN1-201ENST00000216727 STIM2Q9P246 746 aa31.92■■■□□ 2.7
PABPN1-201ENST00000216727 DMGDHQ9UI17 866 aaKnown RBP31.92■■■□□ 2.7
PABPN1-201ENST00000216727 ASAP2O43150 1006 aa31.92■■■□□ 2.7
PABPN1-201ENST00000216727 GH1P01241 217 aa31.92■■■□□ 2.7
PABPN1-201ENST00000216727 RASGEF1CQ8N431 466 aa31.92■■■□□ 2.7
PABPN1-201ENST00000216727 HDAC7Q8WUI4 952 aa31.92■■■□□ 2.7
PABPN1-201ENST00000216727 MTA2O94776 668 aa31.91■■■□□ 2.7
PABPN1-201ENST00000216727 MCL1Q07820 350 aa31.91■■■□□ 2.7
PABPN1-201ENST00000216727 MAMDC4Q6UXC1 1216 aa31.91■■■□□ 2.7
PABPN1-201ENST00000216727 RHPN2Q8IUC4 686 aa31.91■■■□□ 2.7
PABPN1-201ENST00000216727 ZMYND10O75800 440 aa31.9■■■□□ 2.7
PABPN1-201ENST00000216727 MKRN3Q13064 507 aaKnown RBP31.9■■■□□ 2.7
PABPN1-201ENST00000216727 CASP8Q14790 479 aa31.9■■■□□ 2.7
PABPN1-201ENST00000216727 ZNF484Q5JVG2 852 aa31.9■■■□□ 2.7
PABPN1-201ENST00000216727 C11orf63Q6NUN7 778 aa31.9■■■□□ 2.7
PABPN1-201ENST00000216727 UBE2Q2Q8WVN8 375 aa31.9■■■□□ 2.7
PABPN1-201ENST00000216727 TRAPPC12Q8WVT3 735 aa31.9■■■□□ 2.7
PABPN1-201ENST00000216727 KATNBL1Q9H079 304 aa31.9■■■□□ 2.7
PABPN1-201ENST00000216727 ABLIM1O14639 778 aa31.9■■■□□ 2.7
PABPN1-201ENST00000216727 CEP104O60308 925 aa31.9■■■□□ 2.7
PABPN1-201ENST00000216727 KRT5P13647 590 aa31.9■■■□□ 2.7
PABPN1-201ENST00000216727 EFCAB12Q6NXP0 572 aa31.9■■■□□ 2.7
PABPN1-201ENST00000216727 PPTC7Q8NI37 304 aa31.9■■■□□ 2.7
PABPN1-201ENST00000216727 ELMO3Q96BJ8 720 aa31.9■■■□□ 2.7
PABPN1-201ENST00000216727 BUD13Q9BRD0 619 aaKnown RBP eCLIP31.9■■■□□ 2.72e-30■■■□□ 18.1
PABPN1-201ENST00000216727 TCHPQ9BT92 498 aa31.9■■■□□ 2.7
PABPN1-201ENST00000216727 FZD8Q9H461 694 aa31.9■■■□□ 2.7
PABPN1-201ENST00000216727 RNPEPQ9H4A4 650 aa31.9■■■□□ 2.7
PABPN1-201ENST00000216727 CDKN2AIPQ9NXV6 580 aaPredicted RBP31.9■■■□□ 2.7
PABPN1-201ENST00000216727 CTTNBP2NLQ9P2B4 639 aa31.9■■■□□ 2.7
PABPN1-201ENST00000216727 PGRMC1O00264 195 aaKnown RBP31.89■■■□□ 2.7
PABPN1-201ENST00000216727 OGTO15294 1046 aa31.89■■■□□ 2.7
PABPN1-201ENST00000216727 TNFRSF8P28908 595 aa31.89■■■□□ 2.7
PABPN1-201ENST00000216727 BPIFB4P59827 614 aa31.89■■■□□ 2.7
PABPN1-201ENST00000216727 SPRYD7Q5W111 196 aa31.89■■■□□ 2.7
PABPN1-201ENST00000216727 TSHZ1Q6ZSZ6 1077 aa31.89■■■□□ 2.7
PABPN1-201ENST00000216727 ZNF677Q86XU0 584 aa31.89■■■□□ 2.7
PABPN1-201ENST00000216727 ACKR2O00590 384 aa31.88■■■□□ 2.69
PABPN1-201ENST00000216727 C22orf31O95567 290 aa31.88■■■□□ 2.69
PABPN1-201ENST00000216727 LGALS2P05162 132 aa31.88■■■□□ 2.69
PABPN1-201ENST00000216727 PROZP22891 400 aa31.88■■■□□ 2.69
PABPN1-201ENST00000216727 SMC1AQ14683 1233 aaKnown RBP31.88■■■□□ 2.69
PABPN1-201ENST00000216727 WDR49Q8IV35 697 aa31.88■■■□□ 2.69
PABPN1-201ENST00000216727 C2orf69Q8N8R5 385 aa31.88■■■□□ 2.69
PABPN1-201ENST00000216727 PARK7Q99497 189 aaKnown RBP31.88■■■□□ 2.69
PABPN1-201ENST00000216727 NFKBIZQ9BYH8 718 aa31.88■■■□□ 2.69
PABPN1-201ENST00000216727 TTC7AQ9ULT0 858 aaPredicted RBP31.88■■■□□ 2.69
PABPN1-201ENST00000216727 PCDHB2Q9Y5E7 798 aa31.88■■■□□ 2.69
PABPN1-201ENST00000216727 HARSP12081 509 aaKnown RBP31.88■■■□□ 2.69
PABPN1-201ENST00000216727 TNNC1P63316 161 aa31.88■■■□□ 2.69
PABPN1-201ENST00000216727 PTPROQ16827 1216 aa31.88■■■□□ 2.69
PABPN1-201ENST00000216727 OR5B17Q8NGF7 314 aa31.88■■■□□ 2.69
PABPN1-201ENST00000216727 GTF3C4Q9UKN8 822 aa31.88■■■□□ 2.69
PABPN1-201ENST00000216727 DDX3YO15523 660 aaKnown RBP31.87■■■□□ 2.69
PABPN1-201ENST00000216727 PTENP60484 403 aa31.87■■■□□ 2.69
PABPN1-201ENST00000216727 CUL2Q13617 745 aa31.87■■■□□ 2.69
PABPN1-201ENST00000216727 GRB14Q14449 540 aa31.87■■■□□ 2.69
PABPN1-201ENST00000216727 GPR142Q7Z601 462 aa31.87■■■□□ 2.69
PABPN1-201ENST00000216727 VIPAS39Q9H9C1 493 aa31.87■■■□□ 2.69
PABPN1-201ENST00000216727 PTPRHQ9HD43 1115 aa31.87■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms