RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 HOXA9P31269 272 aa17.48■□□□□ 0.39
ERCC1-201ENST00000013807 GNL2Q13823 731 aaKnown RBP17.48■□□□□ 0.39
ERCC1-201ENST00000013807 NBR1Q14596 966 aa17.48■□□□□ 0.39
ERCC1-201ENST00000013807 ATF7IP2Q5U623 682 aa17.48■□□□□ 0.39
ERCC1-201ENST00000013807 ALKAL1Q6UXT8 129 aa17.48■□□□□ 0.39
ERCC1-201ENST00000013807 RTL10Q7L3V2 364 aa17.48■□□□□ 0.39
ERCC1-201ENST00000013807 RABGGTAQ92696 567 aa17.48■□□□□ 0.39
ERCC1-201ENST00000013807 PTPRHQ9HD43 1115 aa17.48■□□□□ 0.39
ERCC1-201ENST00000013807 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.48■□□□□ 0.39
ERCC1-201ENST00000013807 DDX19AQ9NUU7 478 aaKnown RBP17.48■□□□□ 0.39
ERCC1-201ENST00000013807 CACNG4Q9UBN1 327 aa17.48■□□□□ 0.39
ERCC1-201ENST00000013807 WNT16Q9UBV4 365 aa17.48■□□□□ 0.39
ERCC1-201ENST00000013807 FBXW11Q9UKB1 542 aa17.48■□□□□ 0.39
ERCC1-201ENST00000013807 PCDHB6Q9Y5E3 794 aa17.48■□□□□ 0.39
ERCC1-201ENST00000013807 MYH15Q9Y2K3 1946 aa17.47■□□□□ 0.39
ERCC1-201ENST00000013807 CASTOR2A6NHX0 329 aa17.47■□□□□ 0.39
ERCC1-201ENST00000013807 POU2F2P09086 479 aa17.47■□□□□ 0.39
ERCC1-201ENST00000013807 HNRNPA1P09651 372 aaKnown RBP eCLIP17.47■□□□□ 0.39
ERCC1-201ENST00000013807 SPATA31D3P0C874 917 aa17.47■□□□□ 0.39
ERCC1-201ENST00000013807 NPR3P17342 541 aa17.47■□□□□ 0.39
ERCC1-201ENST00000013807 IL17AQ16552 155 aa17.47■□□□□ 0.39
ERCC1-201ENST00000013807 FAM171A1Q5VUB5 890 aa17.47■□□□□ 0.39
ERCC1-201ENST00000013807 SPATA31D4Q6ZUB0 917 aa17.47■□□□□ 0.39
ERCC1-201ENST00000013807 APBB1IPQ7Z5R6 666 aaPredicted RBP17.47■□□□□ 0.39
ERCC1-201ENST00000013807 DAW1Q8N136 415 aa17.47■□□□□ 0.39
ERCC1-201ENST00000013807 MYADMQ96S97 322 aa17.47■□□□□ 0.39
ERCC1-201ENST00000013807 MMTAG2Q9BU76 263 aaKnown RBP17.47■□□□□ 0.39
ERCC1-201ENST00000013807 ARHGAP28Q9P2N2 729 aa17.47■□□□□ 0.39
ERCC1-201ENST00000013807 DNM3Q9UQ16 869 aa17.47■□□□□ 0.39
ERCC1-201ENST00000013807 USP20Q9Y2K6 914 aa17.47■□□□□ 0.39
ERCC1-201ENST00000013807 RBM19Q9Y4C8 960 aaKnown RBP17.47■□□□□ 0.39
ERCC1-201ENST00000013807 ZFP37Q9Y6Q3 630 aaPredicted RBP17.47■□□□□ 0.39
ERCC1-201ENST00000013807 WDR87Q6ZQQ6 2873 aa17.46■□□□□ 0.39
ERCC1-201ENST00000013807 SPTBN4Q9H254 2564 aa17.46■□□□□ 0.39
ERCC1-201ENST00000013807 ANHXE9PGG2 379 aa17.46■□□□□ 0.39
ERCC1-201ENST00000013807 LAMP2P13473 410 aa17.46■□□□□ 0.39
ERCC1-201ENST00000013807 RPL17P18621 184 aaKnown RBP17.46■□□□□ 0.39
ERCC1-201ENST00000013807 AOC1P19801 751 aa17.46■□□□□ 0.39
ERCC1-201ENST00000013807 FGFR3P22607 806 aa17.46■□□□□ 0.39
ERCC1-201ENST00000013807 NPTX2P47972 431 aa17.46■□□□□ 0.39
ERCC1-201ENST00000013807 RAB33AQ14088 237 aa17.46■□□□□ 0.39
ERCC1-201ENST00000013807 UVSSAQ2YD98 709 aa17.46■□□□□ 0.39
ERCC1-201ENST00000013807 HYIQ5T013 277 aa17.46■□□□□ 0.39
ERCC1-201ENST00000013807 KRT79Q5XKE5 535 aa17.46■□□□□ 0.39
ERCC1-201ENST00000013807 CWF19L1Q69YN2 538 aaKnown RBP17.46■□□□□ 0.39
ERCC1-201ENST00000013807 DCLRE1AQ6PJP8 1040 aa17.46■□□□□ 0.39
ERCC1-201ENST00000013807 PRSS55Q6UWB4 352 aaPredicted RBP17.46■□□□□ 0.39
ERCC1-201ENST00000013807 CD300LGQ6UXG3 332 aa17.46■□□□□ 0.39
ERCC1-201ENST00000013807 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.46■□□□□ 0.39
ERCC1-201ENST00000013807 C1orf186Q6ZWK4 172 aa17.46■□□□□ 0.39
ERCC1-201ENST00000013807 SLC44A3Q8N4M1 653 aa17.46■□□□□ 0.39
ERCC1-201ENST00000013807 SNX29Q8TEQ0 813 aa17.46■□□□□ 0.39
ERCC1-201ENST00000013807 UROC1Q96N76 676 aa17.46■□□□□ 0.39
ERCC1-201ENST00000013807 ACO2Q99798 780 aaKnown RBP17.46■□□□□ 0.39
ERCC1-201ENST00000013807 KIFC3Q9BVG8 833 aa17.46■□□□□ 0.39
ERCC1-201ENST00000013807 TIPINQ9BVW5 301 aa17.46■□□□□ 0.39
ERCC1-201ENST00000013807 KCNG1Q9UIX4 513 aa17.46■□□□□ 0.39
ERCC1-201ENST00000013807 E9PMD0 336 aa17.45■□□□□ 0.38
ERCC1-201ENST00000013807 PROZP22891 400 aa17.45■□□□□ 0.38
ERCC1-201ENST00000013807 GRM5P41594 1212 aa17.45■□□□□ 0.38
ERCC1-201ENST00000013807 MAPK7Q13164 816 aa17.45■□□□□ 0.38
ERCC1-201ENST00000013807 PSMD5Q16401 504 aa17.45■□□□□ 0.38
ERCC1-201ENST00000013807 UPP1Q16831 310 aa17.45■□□□□ 0.38
ERCC1-201ENST00000013807 RILPL1Q5EBL4 403 aa17.45■□□□□ 0.38
ERCC1-201ENST00000013807 RINT1Q6NUQ1 792 aa17.45■□□□□ 0.38
ERCC1-201ENST00000013807 DTHD1Q6ZMT9 781 aa17.45■□□□□ 0.38
ERCC1-201ENST00000013807 TAS1R3Q7RTX0 852 aa17.45■□□□□ 0.38
ERCC1-201ENST00000013807 ATOH1Q92858 354 aaPredicted RBP17.45■□□□□ 0.38
ERCC1-201ENST00000013807 KCNN1Q92952 543 aa17.45■□□□□ 0.38
ERCC1-201ENST00000013807 DRC1Q96MC2 740 aa17.45■□□□□ 0.38
ERCC1-201ENST00000013807 RTP3Q9BQQ7 232 aa17.45■□□□□ 0.38
ERCC1-201ENST00000013807 PIDD1Q9HB75 910 aa17.45■□□□□ 0.38
ERCC1-201ENST00000013807 POLD4Q9HCU8 107 aa17.45■□□□□ 0.38
ERCC1-201ENST00000013807 MTRRQ9UBK8 725 aa17.45■□□□□ 0.38
ERCC1-201ENST00000013807 KIF3AQ9Y496 699 aa17.45■□□□□ 0.38
ERCC1-201ENST00000013807 FANCMQ8IYD8 2048 aa17.45■□□□□ 0.38
ERCC1-201ENST00000013807 DMDP11532 3685 aa17.44■□□□□ 0.38
ERCC1-201ENST00000013807 SMIM28A0A1B0GU29 152 aa17.44■□□□□ 0.38
ERCC1-201ENST00000013807 H0Y858 1186 aa17.44■□□□□ 0.38
ERCC1-201ENST00000013807 ABLIM1O14639 778 aa17.44■□□□□ 0.38
ERCC1-201ENST00000013807 SRFP11831 508 aa17.44■□□□□ 0.38
ERCC1-201ENST00000013807 GUCY2CP25092 1073 aa17.44■□□□□ 0.38
ERCC1-201ENST00000013807 GBP2P32456 591 aaPredicted RBP17.44■□□□□ 0.38
ERCC1-201ENST00000013807 NBL1P41271 181 aa17.44■□□□□ 0.38
ERCC1-201ENST00000013807 RABEP1Q15276 862 aa17.44■□□□□ 0.38
ERCC1-201ENST00000013807 TMEM132AQ24JP5 1023 aa17.44■□□□□ 0.38
ERCC1-201ENST00000013807 MRPL4Q9BYD3 311 aaKnown RBP17.44■□□□□ 0.38
ERCC1-201ENST00000013807 MFSD1Q9H3U5 465 aa17.44■□□□□ 0.38
ERCC1-201ENST00000013807 TOPORSQ9NS56 1045 aaPredicted RBP17.44■□□□□ 0.38
ERCC1-201ENST00000013807 GDAQ9Y2T3 454 aa17.44■□□□□ 0.38
ERCC1-201ENST00000013807 BACE2Q9Y5Z0 518 aa17.44■□□□□ 0.38
ERCC1-201ENST00000013807 CACNA1IQ9P0X4 2223 aa17.44■□□□□ 0.38
ERCC1-201ENST00000013807 ADAM12O43184 909 aa17.43■□□□□ 0.38
ERCC1-201ENST00000013807 TRAPPC3O43617 180 aa17.43■□□□□ 0.38
ERCC1-201ENST00000013807 ST18O60284 1047 aa17.43■□□□□ 0.38
ERCC1-201ENST00000013807 HIP1RO75146 1068 aa17.43■□□□□ 0.38
ERCC1-201ENST00000013807 B3GAT3O94766 335 aa17.43■□□□□ 0.38
ERCC1-201ENST00000013807 KCNE1P15382 129 aa17.43■□□□□ 0.38
ERCC1-201ENST00000013807 CLCNKBP51801 687 aa17.43■□□□□ 0.38
ERCC1-201ENST00000013807 PEX3P56589 373 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms