RNA–Protein interactions for RNA: ENSMUST00000112251.8

Ubr3-202, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ubr3, Length 8,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-202ENSMUST00000112251 Sh3glb1Q9JK48 365 aa17.41■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Serpina1aP07758 413 aa17.4■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Psma2P49722 234 aa17.4■□□□□ 0.38
Ubr3-202ENSMUST00000112251 YwhaqP68254 245 aaKnown RBP17.4■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Pick1Q62083 416 aa17.4■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Chsy1Q6ZQ11 800 aa17.4■□□□□ 0.38
Ubr3-202ENSMUST00000112251 C1qtnf1Q9QXP7 281 aa17.4■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Fam167aQ6P1G6 215 aa17.4■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Lrrc27Q80YS5 523 aa17.4■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Catsper4Q8BVN3 442 aa17.4■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Fam71dD3YV92 440 aa17.4■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Eddm13E9Q7F5 164 aa17.4■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Ces3aQ63880 571 aa17.4■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Ces3bQ8VCU1 571 aa17.4■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Trmt112Q9DCG9 125 aa17.4■□□□□ 0.38
Ubr3-202ENSMUST00000112251 RalbQ9JIW9 206 aa17.4■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Usp14Q9JMA1 493 aaKnown RBP17.4■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Dhx35A2ACQ1 703 aaKnown RBP17.4■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Pou2f3P31362 431 aa17.4■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Fhod1Q6P9Q4 1197 aa17.4■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Nlrp4bQ8C6J9 863 aa17.4■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Nsl1Q8K305 281 aa17.4■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Usp15Q8R5H1 981 aa17.4■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Olfr1467Q8VFW1 308 aa17.4■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Mapk9Q9WTU6 423 aa17.4■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Angpt2O35608 496 aa17.4■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Vamp4O70480 141 aa17.4■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Zbtb7aO88939 569 aaKnown RBP17.4■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Uspl1Q3ULM6 1089 aa17.4■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Tmem247Q497K7 211 aa17.4■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Sh3glb2Q8R3V5 400 aa17.4■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Akr1c21Q91WR5 323 aa17.4■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Rpn2Q9DBG6 631 aaKnown RBP17.4■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Grk4O70291 574 aa17.4■□□□□ 0.38
Ubr3-202ENSMUST00000112251 SykP48025 629 aa17.4■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Cav1P49817 178 aa17.4■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Atp11bQ6DFW5 1175 aa17.4■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Gja6Q6S5G4 283 aa17.4■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Terb1Q8C0V1 768 aa17.4■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Ulk4Q3V129 1303 aa17.4■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Lipo1J3QME6 396 aa17.39■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Gm12794L7MTS5 483 aa17.39■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Ush1gQ80T11 461 aa17.39■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Nckap1lQ8K1X4 1134 aa17.39■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Zmynd10Q99ML0 440 aa17.39■□□□□ 0.38
Ubr3-202ENSMUST00000112251 Clrn2B2RVW2 232 aa17.39■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Znf24Q91VN1 368 aa17.39■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Myo10F8VQB6 2062 aa17.39■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Patl2A2ARM1 529 aa17.39■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Gm3371F7CQW8 167 aa17.39■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Vmn2r5K7N788 911 aa17.39■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Pdap1Q3UHX2 181 aaKnown RBP17.39■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Thnsl1Q8BH55 747 aa17.39■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Q8BWG4 1187 aa17.39■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Mcrs1Q99L90 462 aa17.39■□□□□ 0.37
Ubr3-202ENSMUST00000112251 OvosQ3UU35 1456 aa17.39■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Gm5795E9PZN8 263 aa17.39■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Slc27a6E9Q9W4 619 aa17.39■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Usp13Q5BKP2 858 aa17.39■□□□□ 0.37
Ubr3-202ENSMUST00000112251 AgpsQ8C0I1 645 aa17.39■□□□□ 0.37
Ubr3-202ENSMUST00000112251 HpdlQ8K248 371 aa17.39■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Eif2s3xQ9Z0N1 472 aaKnown RBP17.39■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Eif2s3yQ9Z0N2 472 aa17.39■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Kif28pD3YXS5 1028 aa17.39■□□□□ 0.37
Ubr3-202ENSMUST00000112251 SfnO70456 248 aaKnown RBP17.39■□□□□ 0.37
Ubr3-202ENSMUST00000112251 CntfP51642 198 aa17.39■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Vps72Q62481 368 aa17.39■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Rasgrp4Q8BTM9 673 aa17.39■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Dcun1d2Q8BZJ7 259 aa17.39■□□□□ 0.37
Ubr3-202ENSMUST00000112251 MlphQ91V27 590 aa17.39■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Calr3Q9D9Q6 380 aa17.39■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Ddx25Q9QY15 484 aa17.39■□□□□ 0.37
Ubr3-202ENSMUST00000112251 DroshaQ5HZJ0 1373 aaKnown RBP17.39■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Gspt2Q149F3 632 aa17.39■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Nup62Q63850 526 aa17.39■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Fam102aQ78T81 392 aa17.39■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Poc5Q9DBS8 558 aa17.39■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Prss51A0A286YDY8 319 aa17.38■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Zbed5B2RPU8 756 aa17.38■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Stx7O70439 261 aa17.38■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Jak1P52332 1153 aa17.38■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Cct3P80318 545 aaKnown RBP17.38■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Cd34Q64314 382 aa17.38■□□□□ 0.37
Ubr3-202ENSMUST00000112251 ArpinQ9D0A3 226 aa17.38■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Mrto4Q9D0I8 239 aaKnown RBP17.38■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Racgap1Q9WVM1 628 aa17.38■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Klc1O88447 541 aa17.38■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Olfr295Q7TS08 309 aa17.38■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Hspa13Q8BM72 471 aa17.38■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Cyp3a44Q9EQW4 504 aa17.38■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Eif3dO70194 548 aaKnown RBP17.38■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Aifm3Q3TY86 605 aa17.38■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Churc1Q6DG52 112 aa17.38■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Luzp2Q8BGY3 345 aa17.38■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Tceal3Q8R0A5 200 aa17.38■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Ppp6r2Q8R3Q2 923 aa17.38■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Dpp3Q99KK7 738 aa17.38■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Tmem132bF7BAB2 1078 aa17.38■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Polr1bP70700 1135 aa17.38■□□□□ 0.37
Ubr3-202ENSMUST00000112251 Tmem26Q3UP23 366 aa17.38■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 19.6 ms