RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Q9DA42 136 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Gucy1a3Q9ERL9 691 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Ecel1Q9JMI0 775 aa12.34□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Gm4758L7N258 96 aa12.33□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Ifnb1P01575 182 aa12.33□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Cyp2b9P12790 491 aa12.33□□□□□ -0.44
Col9a1-202ENSMUST00000088349 LdhbP16125 334 aaKnown RBP12.33□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Pid1Q3UBG2 217 aa12.33□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Znf618Q80YY7 953 aaKnown RBP12.33□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Q8BGC1 442 aa12.33□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Fbxl13Q8CDU4 790 aa12.33□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Rpa1Q8VEE4 623 aaKnown RBP12.33□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Sppl3Q9CUS9 384 aa12.33□□□□□ -0.44
Col9a1-202ENSMUST00000088349 TarsQ9D0R2 722 aaKnown RBP12.33□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Hsf2bpQ9D4G2 338 aa12.33□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Rnf225Q9D7D1 332 aa12.33□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Lrrc34Q9DAM1 415 aa12.33□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Cnga3Q9JJZ8 631 aa12.33□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Rfx8D3YU81 596 aa12.33□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Trove2O08848 538 aa12.33□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Fmnl3Q6ZPF4 1028 aa12.33□□□□□ -0.44
Col9a1-202ENSMUST00000088349 D630039A03RikQ8K0M7 236 aa12.33□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Zbtb44Q8R0A2 453 aa12.33□□□□□ -0.44
Col9a1-202ENSMUST00000088349 CrygnQ8VHL5 183 aa12.33□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Gmcl1Q920G9 524 aa12.33□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Spdl1Q923A2 608 aa12.33□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Ptgdr2Q9Z2J6 382 aa12.33□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Flot1O08917 428 aa12.32□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Rrm1P07742 792 aa12.32□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Fam81aQ3UXZ6 364 aa12.32□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Slc10a5Q5PT54 434 aa12.32□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Ppp1r13bQ62415 1087 aa12.32□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Gpr156Q6PCP7 798 aa12.32□□□□□ -0.44
Col9a1-202ENSMUST00000088349 C2cd2lQ80X80 706 aa12.32□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Kbtbd3Q8BHI4 607 aa12.32□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Btnl9Q8BJE2 536 aa12.32□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Kcnv2Q8CFS6 562 aa12.32□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Plcg2Q8CIH5 1265 aa12.32□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Vps36Q91XD6 386 aa12.32□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Iqcf1Q9D9K8 182 aa12.32□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Kcnh7Q9ER47 1195 aa12.32□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Nudt5Q9JKX6 218 aa12.32□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Ifi202Q9R002 445 aa12.32□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Phrf1A6H619 1682 aa12.32□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Prss51A0A286YDY8 319 aa12.32□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Slfn8B1ARD8 910 aa12.32□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Lonrf2B2RT44 518 aa12.32□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Gm5926E9PWJ8 236 aa12.32□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Atp9aO70228 1047 aa12.32□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Magea1O89006 320 aa12.32□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Magea5O89009 320 aa12.32□□□□□ -0.44
Col9a1-202ENSMUST00000088349 RalaP63321 206 aa12.32□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Col6a1Q04857 1025 aa12.32□□□□□ -0.44
Col9a1-202ENSMUST00000088349 SpoplQ2M2N2 392 aa12.32□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Tfe3Q64092 572 aaKnown RBP12.32□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Uts2bQ765I1 113 aa12.32□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Ccdc169Q8BXX9 214 aa12.32□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Kiaa0391Q8JZY4 584 aaKnown RBP12.32□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Uroc1Q8VC12 676 aa12.32□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Magea2Q9R2A2 320 aa12.32□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Mzf1S4R1L6 814 aa12.32□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Col4a5Q63ZW6 1691 aa12.32□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Ubr3Q5U430 1889 aa12.32□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Atp2a2O55143 1044 aaKnown RBP12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 CopeO89079 308 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Fmr1P35922 614 aaKnown RBP12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Sparcl1P70663 650 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 rp9P97762 213 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Ccdc138Q0VF22 680 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Ankmy2Q3TPE9 440 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Q3UTZ3 580 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Ccdc160Q3UYG1 323 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Tab3Q571K4 716 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Zdhhc18Q5Y5T2 380 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Klra3Q64329 266 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Ldlrap1Q8C142 308 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Uba6Q8C7R4 1053 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 A430089I19RikQ8C9W1 407 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 AdigQ8R400 80 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Bcs1lQ9CZP5 418 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 SarnpQ9D1J3 210 aaKnown RBP12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Mpp2Q9WV34 552 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Tll2Q9WVM6 1012 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Gon4lQ9DB00 2260 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Fam205aA2APU8 1308 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Wdr95D3Z7A8 784 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Eddm13E9Q7F5 164 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 UgcgO88693 394 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Slc1a1P51906 523 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Ect2Q07139 913 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Cyp2c67Q569X9 491 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 FancbQ5XJY6 703 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Churc1Q6DG52 112 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Adgrg6Q6F3F9 1165 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Dusp4Q8BFV3 398 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Zfp120Q8BZW4 436 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Klhl11Q8CE33 709 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Fam20aQ8CID3 541 aa12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Nop56Q9D6Z1 580 aaKnown RBP12.31□□□□□ -0.44
Col9a1-202ENSMUST00000088349 Ubiad1Q9DC60 336 aa12.31□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 21.9 ms