RNA–Protein interactions for RNA: ENSMUST00000062606.7

Upk3b-201, Transcript of Uroplakin-3b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upk3b, Length 3,530 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3b-201ENSMUST00000062606 Dync1li2Q6PDL0 492 aaKnown RBP12.83□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Ano2Q8CFW1 1002 aa12.83□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Tmem60Q8K174 133 aa12.83□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Klhl25Q8R2P1 589 aa12.83□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Ppp2r5dQ91V89 594 aa12.83□□□□□ -0.36
Upk3b-201ENSMUST00000062606 B4galt4Q9JJ04 344 aa12.83□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Plod3Q9R0E1 741 aa12.83□□□□□ -0.36
Upk3b-201ENSMUST00000062606 RpgrQ9R0X5 1001 aa12.83□□□□□ -0.36
Upk3b-201ENSMUST00000062606 4932429P05RikA2ADI4 785 aa12.83□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Ifit3bE9PV48 403 aa12.83□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Gm10639E9Q6L7 222 aa12.83□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Tmem132bF7BAB2 1078 aa12.83□□□□□ -0.36
Upk3b-201ENSMUST00000062606 2210016F16RikG3X8U3 338 aa12.83□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Gm3383J3QQ59 259 aa12.83□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Gm3164L7N2B9 238 aa12.83□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Gm3239L7N2D9 227 aa12.83□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Bcl7cO08664 217 aa12.83□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Api5O35841 504 aaKnown RBP12.83□□□□□ -0.36
Upk3b-201ENSMUST00000062606 NfibP97863 570 aaKnown RBP12.83□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Fbln1Q08879 705 aa12.83□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Mcm9Q2KHI9 1134 aa12.83□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Nlrx1Q3TL44 975 aa12.83□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Smcr8Q3UMB5 935 aa12.83□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Tmprss11aQ3UQ41 389 aa12.83□□□□□ -0.36
Upk3b-201ENSMUST00000062606 P2rx3Q3UR32 397 aa12.83□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Nr1h4Q60641 488 aa12.83□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Sema4bQ62179 823 aa12.83□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Atp2a3Q64518 1038 aa12.83□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Gramd1aQ8VEF1 722 aa12.83□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Ctu1Q99J10 420 aa12.83□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Tfr2Q9JKX3 798 aa12.83□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Nr2e3Q9QXZ7 395 aa12.83□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Gm4871D3Z0W7 314 aa12.82□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Pik3r1P26450 724 aa12.82□□□□□ -0.36
Upk3b-201ENSMUST00000062606 EdnrbP48302 442 aa12.82□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Meis3P97368 378 aa12.82□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Tmem120aQ8C1E7 343 aa12.82□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Vps52Q8C754 723 aaKnown RBP12.82□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Prl7c1Q9CRB5 251 aa12.82□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Ank3G5E8K5 1961 aa12.82□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Adamts9E9PUN6 1931 aa12.82□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Mroh5E9PUJ8 762 aa12.82□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Msh3P13705 1091 aa12.82□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Ppp3ccP48455 513 aa12.82□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Rps6P62754 249 aaKnown RBP12.82□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Ano9P86044 747 aa12.82□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Xlr3cQ61806 226 aa12.82□□□□□ -0.36
Upk3b-201ENSMUST00000062606 BegainQ68EF6 600 aa12.82□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Ndufb9Q9CQJ8 179 aa12.82□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Ccdc182Q9D9C6 152 aa12.82□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Ralgps2Q9ERD6 590 aa12.82□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Copb1Q9JIF7 953 aa12.82□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Chek2Q9Z265 546 aa12.82□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Gm13941A2AJ38 245 aa12.82□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Sec24cG3X972 1096 aaKnown RBP12.82□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Gm3138K7N754 218 aa12.82□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Clcn6O35454 870 aa12.82□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Actn4P57780 912 aaKnown RBP12.82□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Meis1Q60954 390 aa12.82□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Kcnj11Q61743 390 aa12.82□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Usp37Q8C0R0 979 aa12.82□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Q8C5C9 218 aa12.82□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Slc4a8Q8JZR6 1089 aa12.82□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Nod2Q8K3Z0 1020 aa12.82□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Ssx2ipQ8VC66 615 aa12.82□□□□□ -0.36
Upk3b-201ENSMUST00000062606 RnpepQ8VCT3 650 aaKnown RBP12.82□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Gucy1a3Q9ERL9 691 aa12.82□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Tcp11x2A2AEI7 503 aa12.81□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Krt90E9Q1Z0 538 aa12.81□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Eps15P42567 897 aa12.81□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Gfpt1P47856 697 aa12.81□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Tars2Q3UQ84 723 aaKnown RBP12.81□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Usp49Q6P9L4 685 aa12.81□□□□□ -0.36
Upk3b-201ENSMUST00000062606 MyocdQ8VIM5 935 aa12.81□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Ddx47Q9CWX9 455 aaKnown RBP12.81□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Cdca7Q9D0M2 382 aa12.81□□□□□ -0.36
Upk3b-201ENSMUST00000062606 AmfrQ9R049 643 aa12.81□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Fyb2A2A995 729 aa12.81□□□□□ -0.36
Upk3b-201ENSMUST00000062606 PahP16331 453 aa12.81□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Pou2f1P25425 770 aa12.81□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Hesx1Q61658 185 aa12.81□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Rbm12b2Q66JV4 834 aaKnown RBP12.81□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Dnph1Q80VJ3 173 aa12.81□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Kcng4Q80XM3 506 aa12.81□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Hsdl1Q8BTX9 330 aa12.81□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Atp2a1Q8R429 994 aa12.81□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Dnajc17Q91WT4 303 aa12.81□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Tsnaxip1Q99P25 704 aa12.81□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Dnajc19Q9CQV7 116 aa12.81□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Fam133bQ9CVI2 245 aaKnown RBP12.81□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Extl2Q9ES89 330 aa12.81□□□□□ -0.36
Upk3b-201ENSMUST00000062606 GdaQ9R111 454 aa12.81□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Fxr2Q9WVR4 673 aaKnown RBP12.81□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Cyp2j7A0A140T8U1 504 aa12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Itgb5O70309 798 aa12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 MarcksP26645 309 aaKnown RBP12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Cd300lgQ1ERP8 331 aa12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Gpsm3Q3U1Z5 159 aa12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Nutm2Q3V0C3 733 aa12.8□□□□□ -0.36
Upk3b-201ENSMUST00000062606 Tas2r124Q7M718 309 aa12.8□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 37.3 ms